RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 DYNLL2Q96FJ2 89 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 SCLYQ96I15 445 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 AGBL1Q96MI9 1066 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 TEX13BQ9BXU2 312 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 TRPV6Q9H1D0 765 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 DCP1AQ9NPI6 582 aaPredicted RBP13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 SWAP70Q9UH65 585 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 MAGEB6P1A0A0J9YX57 407 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 LPXNO60711 386 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 TAP1Q03518 808 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 GRB10Q13322 594 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 ITGA7Q13683 1181 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 POLA2Q14181 598 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 FAM83BQ5T0W9 1011 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 SNRNP48Q6IEG0 339 aaKnown RBP13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 ARMCX2Q7L311 632 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 ARNTL2Q8WYA1 636 aa13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 CRNKL1Q9BZJ0 848 aaKnown RBP13.67□□□□□ -0.22
HLA-DOA-206ENST00000495532 TET1Q8NFU7 2136 aa13.66□□□□□ -0.22
HLA-DOA-206ENST00000495532 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.66□□□□□ -0.22
HLA-DOA-206ENST00000495532 CABYRO75952 493 aa13.66□□□□□ -0.22
HLA-DOA-206ENST00000495532 PFKMP08237 780 aa13.66□□□□□ -0.22
HLA-DOA-206ENST00000495532 EEF2P13639 858 aaKnown RBP13.66□□□□□ -0.22
HLA-DOA-206ENST00000495532 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.66□□□□□ -0.22
HLA-DOA-206ENST00000495532 SPRED2Q7Z698 418 aa13.66□□□□□ -0.22
HLA-DOA-206ENST00000495532 CT47B1P0C2W7 299 aaPredicted RBP13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 OS9Q13438 667 aaPredicted RBP13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 CCDC144CPQ8IYA2 1237 aa13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 TRMT2AQ8IZ69 625 aaKnown RBP13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 ARHGAP45Q92619 1136 aa13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 EAF2Q96CJ1 260 aaPredicted RBP13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 SLC9A7Q96T83 725 aa13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 SEZ6LQ9BYH1 1024 aa13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 CCDC8Q9H0W5 538 aaPredicted RBP13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 GNEQ9Y223 722 aaKnown RBP13.65□□□□□ -0.22
HLA-DOA-206ENST00000495532 ATP2A1O14983 1001 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 PTGS1P23219 599 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 PSMC6P62333 389 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 TNFAIP2Q03169 654 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 FSCN1Q16658 493 aaKnown RBP13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 TLK2Q86UE8 772 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 FAM178BQ8IXR5 827 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 GJD3Q8N144 294 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 LCORLQ8N3X6 602 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 SSH3Q8TE77 659 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 CCDC17Q96LX7 622 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 FBXL18Q96ME1 805 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 GOPCQ9HD26 462 aa13.64□□□□□ -0.23
HLA-DOA-206ENST00000495532 SIP14410 1827 aa13.63□□□□□ -0.23
HLA-DOA-206ENST00000495532 PDE6AP16499 860 aa13.63□□□□□ -0.23
HLA-DOA-206ENST00000495532 CDK8P49336 464 aa13.63□□□□□ -0.23
HLA-DOA-206ENST00000495532 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
HLA-DOA-206ENST00000495532 PHOSPHO2Q8TCD6 241 aa13.63□□□□□ -0.23
HLA-DOA-206ENST00000495532 UIMC1Q96RL1 719 aa13.63□□□□□ -0.23
HLA-DOA-206ENST00000495532 NUP88Q99567 741 aaPredicted RBP13.63□□□□□ -0.23
HLA-DOA-206ENST00000495532 ALDH8A1Q9H2A2 487 aaPredicted RBP13.63□□□□□ -0.23
HLA-DOA-206ENST00000495532 KANSL2Q9H9L4 492 aa13.63□□□□□ -0.23
HLA-DOA-206ENST00000495532 LCTP09848 1927 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 MYH4Q9Y623 1939 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 CYP2D7A0A087X1C5 515 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 TCRBV5S4A2TA0A5A2 114 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 ANP32CO43423 234 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 RAD21O60216 631 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 SURF6O75683 361 aaKnown RBP13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 HERC6Q8IVU3 1022 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 CPXCR1Q8N123 301 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 ANKRD35Q8N283 1001 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 KCNH6Q9H252 994 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 UBE2ZQ9H832 354 aaPredicted RBP13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 TNNQ9UQP3 1299 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 ZNF532Q9HCE3 1301 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 SCN10AQ9Y5Y9 1956 aa13.62□□□□□ -0.23
HLA-DOA-206ENST00000495532 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 CYP2C9P11712 490 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 ALADP13716 330 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 TRIM27P14373 513 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 IL9P15248 144 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 SMPD1P17405 629 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 SLC4A3P48751 1232 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 LEXMQ3ZCV2 418 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 C12orf60Q5U649 245 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 NOL8Q76FK4 1167 aaKnown RBP13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 GDPD5Q8WTR4 605 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 RAVER2Q9HCJ3 691 aaKnown RBP13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 TRMT13Q9NUP7 481 aaKnown RBP13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 LMCD1Q9NZU5 365 aa13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 NOP58Q9Y2X3 529 aaKnown RBP13.61□□□□□ -0.23
HLA-DOA-206ENST00000495532 PRKAB2O43741 272 aa13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 ACTN1P12814 892 aa13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 CNTN2Q02246 1040 aa13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 CSPP1Q1MSJ5 1256 aa13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 FAM133AQ8N9E0 248 aa13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 PRPF38AQ8NAV1 312 aaKnown RBP13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 CHST13Q8NET6 341 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms