RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 JMJD4Q9H9V9 463 aa22.65■■□□□ 1.22
HDAC4-212ENST00000495497 HOMER2Q9NSB8 354 aa22.65■■□□□ 1.22
HDAC4-212ENST00000495497 MGAMO43451 1857 aa22.64■■□□□ 1.22
HDAC4-212ENST00000495497 OAZ1P54368 228 aa22.64■■□□□ 1.21
HDAC4-212ENST00000495497 MORN1Q5T089 497 aa22.64■■□□□ 1.21
HDAC4-212ENST00000495497 APOA5Q6Q788 366 aa22.64■■□□□ 1.21
HDAC4-212ENST00000495497 MICU3Q86XE3 530 aa22.64■■□□□ 1.21
HDAC4-212ENST00000495497 CTCFLQ8NI51 663 aaPredicted RBP22.64■■□□□ 1.21
HDAC4-212ENST00000495497 RAET1EQ8TD07 263 aa22.64■■□□□ 1.21
HDAC4-212ENST00000495497 NAP1L2Q9ULW6 460 aaPredicted RBP22.64■■□□□ 1.21
HDAC4-212ENST00000495497 IVNS1ABPQ9Y6Y0 642 aa22.64■■□□□ 1.21
HDAC4-212ENST00000495497 PLEKHA8P1O95397 391 aa22.63■■□□□ 1.21
HDAC4-212ENST00000495497 ALAS1P13196 640 aa22.63■■□□□ 1.21
HDAC4-212ENST00000495497 CYP2B6P20813 491 aa22.63■■□□□ 1.21
HDAC4-212ENST00000495497 PRMT2P55345 433 aa22.63■■□□□ 1.21
HDAC4-212ENST00000495497 TOB2Q14106 344 aaPredicted RBP22.63■■□□□ 1.21
HDAC4-212ENST00000495497 SYNE3Q6ZMZ3 975 aa22.63■■□□□ 1.21
HDAC4-212ENST00000495497 CMTR1Q8N1G2 835 aaKnown RBP22.63■■□□□ 1.21
HDAC4-212ENST00000495497 MAP3K14Q99558 947 aa22.63■■□□□ 1.21
HDAC4-212ENST00000495497 NUDT12Q9BQG2 462 aa22.63■■□□□ 1.21
HDAC4-212ENST00000495497 LARP6Q9BRS8 491 aaKnown RBP22.63■■□□□ 1.21
HDAC4-212ENST00000495497 CCPG1Q9ULG6 757 aa22.63■■□□□ 1.21
HDAC4-212ENST00000495497 HPS5Q9UPZ3 1129 aa22.63■■□□□ 1.21
HDAC4-212ENST00000495497 SLC15A5A6NIM6 579 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 ICAM1P05362 532 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 CALM1P0DP23 149 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 CALM2P0DP24 149 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 CALM3P0DP25 149 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 GRB14Q14449 540 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 CDC37Q16543 378 aaPredicted RBP22.62■■□□□ 1.21
HDAC4-212ENST00000495497 FANCBQ8NB91 859 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 USP6NLQ92738 828 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 AGXT2Q9BYV1 514 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 C22orf23Q9BZE7 217 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 PDRG1Q9NUG6 133 aa22.62■■□□□ 1.21
HDAC4-212ENST00000495497 ZBTB43O43298 467 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 CYTH3O43739 400 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 ADORA2AP29274 412 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 KIF5BP33176 963 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 QRICH1Q2TAL8 776 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 MUM1L1Q5H9M0 696 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 FBXL16Q8N461 479 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 SH3TC2Q8TF17 1288 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 PIBF1Q8WXW3 757 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 IL17RAQ96F46 866 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 TRERF1Q96PN7 1200 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 MMP19Q99542 508 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 RNF146Q9NTX7 359 aa22.61■■□□□ 1.21
HDAC4-212ENST00000495497 ADCY3O60266 1144 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 PGK2P07205 417 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 FCER1AP12319 257 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 ELNP15502 786 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 COPB2P35606 906 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 MAP2K5Q13163 448 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 USH1GQ495M9 461 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 HOMER1Q86YM7 354 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 SRBD1Q8N5C6 995 aaKnown RBP22.6■■□□□ 1.21
HDAC4-212ENST00000495497 SOCS4Q8WXH5 440 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 PIGSQ96S52 555 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 RIOX1Q9H6W3 641 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 DOCK3Q8IZD9 2030 aa22.6■■□□□ 1.21
HDAC4-212ENST00000495497 GOLGA8AA7E2F4 631 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 GOLGA8BA8MQT2 603 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 STRNO43815 780 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 COBLO75128 1261 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 RGS2P41220 211 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 IRF5Q13568 498 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 CCDC82Q8N4S0 544 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 CHST13Q8NET6 341 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 NPLOC4Q8TAT6 608 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 PLXNB2O15031 1838 aa22.59■■□□□ 1.21
HDAC4-212ENST00000495497 CDC27P30260 824 aa22.58■■□□□ 1.21
HDAC4-212ENST00000495497 KCTD2Q14681 263 aa22.58■■□□□ 1.21
HDAC4-212ENST00000495497 CCL14Q16627 93 aa22.58■■□□□ 1.21
HDAC4-212ENST00000495497 TKFCQ3LXA3 575 aa22.58■■□□□ 1.21
HDAC4-212ENST00000495497 SLC9C1Q4G0N8 1177 aa22.58■■□□□ 1.21
HDAC4-212ENST00000495497 DPP9Q86TI2 863 aa22.58■■□□□ 1.21
HDAC4-212ENST00000495497 MTMR8Q96EF0 704 aa22.58■■□□□ 1.21
HDAC4-212ENST00000495497 ABHD8Q96I13 439 aa22.58■■□□□ 1.21
HDAC4-212ENST00000495497 ACAD9Q9H845 621 aa22.58■■□□□ 1.21
HDAC4-212ENST00000495497 FAM217BQ9NTX9 383 aaPredicted RBP22.58■■□□□ 1.21
HDAC4-212ENST00000495497 HTTP42858 3142 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 ZBTB5O15062 677 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 PPP1R11O60927 126 aaPredicted RBP22.57■■□□□ 1.2
HDAC4-212ENST00000495497 GRK4P32298 578 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 METAP2P50579 478 aaKnown RBP eCLIP22.57■■□□□ 1.2
HDAC4-212ENST00000495497 RTN1Q16799 776 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 TMTC3Q6ZXV5 915 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 ABRAQ8N0Z2 381 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 ANKRD35Q8N283 1001 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 KIF2CQ99661 725 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 BACH2Q9BYV9 841 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 FBXO40Q9UH90 709 aa22.57■■□□□ 1.2
HDAC4-212ENST00000495497 hCG_1642624A0A1W2PR95 340 aa22.56■■□□□ 1.2
HDAC4-212ENST00000495497 NFIBO00712 420 aa22.56■■□□□ 1.2
HDAC4-212ENST00000495497 MYCP01106 439 aaPredicted RBP22.56■■□□□ 1.2
HDAC4-212ENST00000495497 PDIA3P30101 505 aaKnown RBP22.56■■□□□ 1.2
HDAC4-212ENST00000495497 ADD1P35611 737 aaKnown RBP22.56■■□□□ 1.2
HDAC4-212ENST00000495497 GNAQP50148 359 aa22.56■■□□□ 1.2
HDAC4-212ENST00000495497 TRIM32Q13049 653 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms