RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 DDX11Q96FC9 970 aa20.32■□□□□ 0.84
CTNS-207ENST00000495445 FGD4Q96M96 766 aa20.32■□□□□ 0.84
CTNS-207ENST00000495445 C11orf49Q9H6J7 331 aa20.32■□□□□ 0.84
CTNS-207ENST00000495445 MTMR7Q9Y216 660 aa20.32■□□□□ 0.84
CTNS-207ENST00000495445 PLXNA1Q9UIW2 1896 aa20.32■□□□□ 0.84
CTNS-207ENST00000495445 CYP21A2P08686 494 aa20.31■□□□□ 0.84
CTNS-207ENST00000495445 ZNF865P0CJ78 1059 aaPredicted RBP20.31■□□□□ 0.84
CTNS-207ENST00000495445 SLC16A2P36021 539 aa20.31■□□□□ 0.84
CTNS-207ENST00000495445 SLC4A3P48751 1232 aa20.31■□□□□ 0.84
CTNS-207ENST00000495445 SNAP25P60880 206 aa20.31■□□□□ 0.84
CTNS-207ENST00000495445 CCDC96Q2M329 555 aa20.31■□□□□ 0.84
CTNS-207ENST00000495445 SYDE2Q5VT97 1194 aa20.31■□□□□ 0.84
CTNS-207ENST00000495445 ENAHQ8N8S7 591 aaPredicted RBP20.31■□□□□ 0.84
CTNS-207ENST00000495445 PFASO15067 1338 aa20.3■□□□□ 0.84
CTNS-207ENST00000495445 SNAI1O95863 264 aaPredicted RBP20.3■□□□□ 0.84
CTNS-207ENST00000495445 ICAM1P05362 532 aa20.3■□□□□ 0.84
CTNS-207ENST00000495445 ANKRD35Q8N283 1001 aa20.3■□□□□ 0.84
CTNS-207ENST00000495445 FAM133AQ8N9E0 248 aa20.3■□□□□ 0.84
CTNS-207ENST00000495445 TRERF1Q96PN7 1200 aa20.3■□□□□ 0.84
CTNS-207ENST00000495445 ACAD9Q9H845 621 aa20.3■□□□□ 0.84
CTNS-207ENST00000495445 GPCPD1Q9NPB8 672 aa20.3■□□□□ 0.84
CTNS-207ENST00000495445 ISY1Q9ULR0 285 aaKnown RBP20.3■□□□□ 0.84
CTNS-207ENST00000495445 U3KPZ7 1027 aaPredicted RBP20.3■□□□□ 0.84
CTNS-207ENST00000495445 CEP290O15078 2479 aa20.3■□□□□ 0.84
CTNS-207ENST00000495445 FRMPD2Q68DX3 1309 aaPredicted RBP20.29■□□□□ 0.84
CTNS-207ENST00000495445 SYNGAP1Q96PV0 1343 aa20.29■□□□□ 0.84
CTNS-207ENST00000495445 SMCHD1A6NHR9 2005 aa20.29■□□□□ 0.84
CTNS-207ENST00000495445 TAL1P17542 331 aaPredicted RBP20.29■□□□□ 0.84
CTNS-207ENST00000495445 GPATCH4Q5T3I0 446 aaKnown RBP20.29■□□□□ 0.84
CTNS-207ENST00000495445 A1CFQ9NQ94 594 aaKnown RBP20.29■□□□□ 0.84
CTNS-207ENST00000495445 RNF146Q9NTX7 359 aa20.29■□□□□ 0.84
CTNS-207ENST00000495445 NR2E3Q9Y5X4 410 aa20.29■□□□□ 0.84
CTNS-207ENST00000495445 FRMPD3Q5JV73 1810 aa20.29■□□□□ 0.84
CTNS-207ENST00000495445 RANBP2P49792 3224 aaKnown RBP20.28■□□□□ 0.84
CTNS-207ENST00000495445 ALAS1P13196 640 aa20.28■□□□□ 0.84
CTNS-207ENST00000495445 SEC23AQ15436 765 aa20.28■□□□□ 0.84
CTNS-207ENST00000495445 BMP2KLQ5H9B9 411 aa20.28■□□□□ 0.84
CTNS-207ENST00000495445 CCDC174Q6PII3 467 aa20.28■□□□□ 0.84
CTNS-207ENST00000495445 CYB5R4Q7L1T6 521 aa20.28■□□□□ 0.84
CTNS-207ENST00000495445 SKAP1Q86WV1 359 aa20.28■□□□□ 0.84
CTNS-207ENST00000495445 PNMA1Q8ND90 353 aa20.28■□□□□ 0.84
CTNS-207ENST00000495445 HOMER2Q9NSB8 354 aa20.28■□□□□ 0.84
CTNS-207ENST00000495445 TNKSO95271 1327 aa20.27■□□□□ 0.84
CTNS-207ENST00000495445 DNM1LO00429 736 aa20.27■□□□□ 0.84
CTNS-207ENST00000495445 EVI5O60447 810 aa20.27■□□□□ 0.84
CTNS-207ENST00000495445 CNTN2Q02246 1040 aa20.27■□□□□ 0.84
CTNS-207ENST00000495445 MUM1L1Q5H9M0 696 aa20.27■□□□□ 0.84
CTNS-207ENST00000495445 ARRDC4Q8NCT1 418 aa20.27■□□□□ 0.84
CTNS-207ENST00000495445 TAF6LQ9Y6J9 622 aa20.27■□□□□ 0.84
CTNS-207ENST00000495445 ALPK3Q96L96 1907 aa20.27■□□□□ 0.84
CTNS-207ENST00000495445 E7EWF7 191 aa20.26■□□□□ 0.83
CTNS-207ENST00000495445 ANO1Q5XXA6 986 aa20.26■□□□□ 0.83
CTNS-207ENST00000495445 LSG1Q9H089 658 aaKnown RBP20.26■□□□□ 0.83
CTNS-207ENST00000495445 KAT14Q9H8E8 782 aa20.26■□□□□ 0.83
CTNS-207ENST00000495445 CCPG1Q9ULG6 757 aa20.26■□□□□ 0.83
CTNS-207ENST00000495445 SOWAHBA6NEL2 793 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 POTEB2H3BUK9 544 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 STOX1Q6ZVD7 989 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 ESYT1Q9BSJ8 1104 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 UBAC1Q9BSL1 405 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 KATNBL1Q9H079 304 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 PRO3102Q9H379 93 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 CYP39A1Q9NYL5 469 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 PNMA2Q9UL42 364 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 CNPY2Q9Y2B0 182 aa20.25■□□□□ 0.83
CTNS-207ENST00000495445 GOLGA8HP0CJ92 632 aa20.24■□□□□ 0.83
CTNS-207ENST00000495445 TRDNQ13061 729 aa20.24■□□□□ 0.83
CTNS-207ENST00000495445 ACVR2BQ13705 512 aa20.24■□□□□ 0.83
CTNS-207ENST00000495445 LRRC41Q15345 812 aa20.24■□□□□ 0.83
CTNS-207ENST00000495445 GJC2Q5T442 439 aaPredicted RBP20.24■□□□□ 0.83
CTNS-207ENST00000495445 CLEC4DQ8WXI8 215 aa20.24■□□□□ 0.83
CTNS-207ENST00000495445 UBA5Q9GZZ9 404 aa20.24■□□□□ 0.83
CTNS-207ENST00000495445 ABHD16BQ9H3Z7 469 aa20.24■□□□□ 0.83
CTNS-207ENST00000495445 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.24■□□□□ 0.83
CTNS-207ENST00000495445 COLQQ9Y215 455 aaPredicted RBP20.24■□□□□ 0.83
CTNS-207ENST00000495445 RBM8AQ9Y5S9 174 aaKnown RBP20.24■□□□□ 0.83
CTNS-207ENST00000495445 ASTN1O14525 1302 aa20.24■□□□□ 0.83
CTNS-207ENST00000495445 WDR19Q8NEZ3 1342 aa20.24■□□□□ 0.83
CTNS-207ENST00000495445 RARBP10826 455 aa20.23■□□□□ 0.83
CTNS-207ENST00000495445 AKR1A1P14550 325 aa20.23■□□□□ 0.83
CTNS-207ENST00000495445 LRRC26Q2I0M4 334 aa20.23■□□□□ 0.83
CTNS-207ENST00000495445 ASPRV1Q53RT3 343 aa20.23■□□□□ 0.83
CTNS-207ENST00000495445 IFIT1BQ5T764 474 aaKnown RBP20.23■□□□□ 0.83
CTNS-207ENST00000495445 ARMCX2Q7L311 632 aa20.23■□□□□ 0.83
CTNS-207ENST00000495445 CCDC144CPQ8IYA2 1237 aa20.23■□□□□ 0.83
CTNS-207ENST00000495445 SENP6Q9GZR1 1112 aaPredicted RBP20.23■□□□□ 0.83
CTNS-207ENST00000495445 CPVLQ9H3G5 476 aa20.23■□□□□ 0.83
CTNS-207ENST00000495445 FAM184BQ9ULE4 1060 aa20.23■□□□□ 0.83
CTNS-207ENST00000495445 NECTIN1Q15223 517 aa20.22■□□□□ 0.83
CTNS-207ENST00000495445 HABP4Q5JVS0 413 aaKnown RBP20.22■□□□□ 0.83
CTNS-207ENST00000495445 NCOA7Q8NI08 942 aa20.22■□□□□ 0.83
CTNS-207ENST00000495445 MORC4Q8TE76 937 aa20.22■□□□□ 0.83
CTNS-207ENST00000495445 ASB14A6NK59 587 aa20.21■□□□□ 0.83
CTNS-207ENST00000495445 NFIBO00712 420 aa20.21■□□□□ 0.83
CTNS-207ENST00000495445 PARP1P09874 1014 aaKnown RBP20.21■□□□□ 0.83
CTNS-207ENST00000495445 BAATQ14032 418 aaPredicted RBP20.21■□□□□ 0.83
CTNS-207ENST00000495445 KIAA1211Q6ZU35 1233 aa20.21■□□□□ 0.83
CTNS-207ENST00000495445 MB21D2Q8IYB1 491 aaPredicted RBP20.21■□□□□ 0.83
CTNS-207ENST00000495445 ADGRF4Q8IZF3 695 aa20.21■□□□□ 0.83
CTNS-207ENST00000495445 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms