RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 RANBP17Q9H2T7 1088 aaKnown RBP14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 ZSWIM6Q9HCJ5 1215 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 VAT1LQ9HCJ6 419 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 SLC5A4Q9NY91 659 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 MAD2L2Q9UI95 211 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 CCPG1Q9ULG6 757 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 GABRQQ9UN88 632 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 PTCH2Q9Y6C5 1203 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 SLC15A5A6NIM6 579 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 ZBTB43O43298 467 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 ICAM1P05362 532 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 ALAS1P13196 640 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 RGS2P41220 211 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 GNAQP50148 359 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 TKFCQ3LXA3 575 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 DPP9Q86TI2 863 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 MICU3Q86XE3 530 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 ADGRF4Q8IZF3 695 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 CHST13Q8NET6 341 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 AGBL1Q96MI9 1066 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 MMP19Q99542 508 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 LZTS2Q9BRK4 669 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 CPVLQ9H3G5 476 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 HOMER2Q9NSB8 354 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 BIN2Q9UBW5 565 aaPredicted RBP14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 FBXO40Q9UH90 709 aa14.06□□□□□ -0.16
CSNK1E-213ENST00000495232 KLF18A0A0U1RQI7 1052 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 ADCY3O60266 1144 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 RXRAP19793 462 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 CYP2B6P20813 491 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 MAP2K5Q13163 448 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 IRF5Q13568 498 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 GRB14Q14449 540 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 CDC37Q16543 378 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 APOA5Q6Q788 366 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 CCDC144CPQ8IYA2 1237 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 ABRAQ8N0Z2 381 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 ANKRD35Q8N283 1001 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 FANCBQ8NB91 859 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 SLAIN1Q8ND83 568 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 BRF1Q92994 677 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 DDX11Q96FC9 970 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 TRERF1Q96PN7 1200 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 UPF3BQ9BZI7 483 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 PDRG1Q9NUG6 133 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 RBM28Q9NW13 759 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 GJD2Q9UKL4 321 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 HPS5Q9UPZ3 1129 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 PLXNB2O15031 1838 aa14.05□□□□□ -0.16
CSNK1E-213ENST00000495232 CENPFP49454 3210 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 DOCK3Q8IZD9 2030 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 ADORA2AP29274 412 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 GRK4P32298 578 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 APOBRQ0VD83 1088 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 MORN1Q5T089 497 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 RAB11FIP4Q86YS3 637 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 TRMT44Q8IYL2 757 aaKnown RBP14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 FBXL16Q8N461 479 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 PXYLP1Q8TE99 480 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 ACAD9Q9H845 621 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 JMJD4Q9H9V9 463 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 RNF146Q9NTX7 359 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 RIPK3Q9Y572 518 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 ZNF536O15090 1300 aa14.04□□□□□ -0.16
CSNK1E-213ENST00000495232 HTTP42858 3142 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 CCDC196A0A1B0GTZ2 297 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 GOLGA8AA7E2F4 631 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 GOLGA8BA8MQT2 603 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 XRCC5P13010 732 aaKnown RBP14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 UBXN2AP68543 259 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 TRAF1Q13077 416 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 PPP2R5BQ15173 497 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 RTN1Q16799 776 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 USH1GQ495M9 461 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 FBXO11Q86XK2 927 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 HOMER1Q86YM7 354 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 APBA2Q99767 749 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 C22orf23Q9BZE7 217 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 BRPF3Q9ULD4 1205 aa14.03□□□□□ -0.16
CSNK1E-213ENST00000495232 MYH6P13533 1939 aa14.02□□□□□ -0.16
CSNK1E-213ENST00000495232 ZBTB5O15062 677 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 ELNP15502 786 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 SMARCA1P28370 1054 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 METAP2P50579 478 aaKnown RBP eCLIP14.02□□□□□ -0.174e-7■■□□□ 12
CSNK1E-213ENST00000495232 RCAN1P53805 252 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 ANKRD1Q15327 319 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 QRICH1Q2TAL8 776 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 SH3TC2Q8TF17 1288 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 PIBF1Q8WXW3 757 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 USP6NLQ92738 828 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 RRP36Q96EU6 259 aaKnown RBP14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 ABHD8Q96I13 439 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 SPZ1Q9BXG8 430 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 AMNQ9BXJ7 453 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 AGXT2Q9BYV1 514 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 RIOX1Q9H6W3 641 aa14.02□□□□□ -0.17
CSNK1E-213ENST00000495232 PFASO15067 1338 aa14.01□□□□□ -0.17
CSNK1E-213ENST00000495232 ABCB11O95342 1321 aa14.01□□□□□ -0.17
CSNK1E-213ENST00000495232 CCDC82Q8N4S0 544 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms