RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 ZSCAN10Q96SZ4 725 aaPredicted RBP21.13■□□□□ 0.97
COL20A1-207ENST00000494913 C11orf49Q9H6J7 331 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 DNAJC25-GNG10A0A024R161 153 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 SEPT4O43236 478 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 EVI5O60447 810 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 ALAS1P13196 640 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 SYDE2Q5VT97 1194 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 ANO1Q5XXA6 986 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.13■□□□□ 0.97
COL20A1-207ENST00000494913 ACAD9Q9H845 621 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 NR2E3Q9Y5X4 410 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 ZNF543Q08ER8 600 aa21.12■□□□□ 0.97
COL20A1-207ENST00000494913 TKFCQ3LXA3 575 aa21.12■□□□□ 0.97
COL20A1-207ENST00000494913 TRERF1Q96PN7 1200 aa21.12■□□□□ 0.97
COL20A1-207ENST00000494913 RNF146Q9NTX7 359 aa21.12■□□□□ 0.97
COL20A1-207ENST00000494913 U3KPZ7 1027 aaPredicted RBP21.12■□□□□ 0.97
COL20A1-207ENST00000494913 SNHG28P0DPA3 235 aa21.11■□□□□ 0.97
COL20A1-207ENST00000494913 ENAHQ8N8S7 591 aaPredicted RBP21.11■□□□□ 0.97
COL20A1-207ENST00000494913 PNMA1Q8ND90 353 aa21.11■□□□□ 0.97
COL20A1-207ENST00000494913 ANKS1AQ92625 1134 aa21.11■□□□□ 0.97
COL20A1-207ENST00000494913 RANBP17Q9H2T7 1088 aaKnown RBP21.11■□□□□ 0.97
COL20A1-207ENST00000494913 KAT14Q9H8E8 782 aa21.11■□□□□ 0.97
COL20A1-207ENST00000494913 NRBP1Q9UHY1 535 aa21.11■□□□□ 0.97
COL20A1-207ENST00000494913 CCPG1Q9ULG6 757 aa21.11■□□□□ 0.97
COL20A1-207ENST00000494913 PLXNA1Q9UIW2 1896 aa21.11■□□□□ 0.97
COL20A1-207ENST00000494913 ICAM1P05362 532 aa21.1■□□□□ 0.97
COL20A1-207ENST00000494913 CYP21A2P08686 494 aa21.1■□□□□ 0.97
COL20A1-207ENST00000494913 TAL1P17542 331 aaPredicted RBP21.1■□□□□ 0.97
COL20A1-207ENST00000494913 UBAC1Q9BSL1 405 aa21.1■□□□□ 0.97
COL20A1-207ENST00000494913 CNPY2Q9Y2B0 182 aa21.1■□□□□ 0.97
COL20A1-207ENST00000494913 PFASO15067 1338 aa21.09■□□□□ 0.97
COL20A1-207ENST00000494913 TNKSO95271 1327 aa21.09■□□□□ 0.97
COL20A1-207ENST00000494913 GOLGA8HP0CJ92 632 aa21.09■□□□□ 0.97
COL20A1-207ENST00000494913 COL6A1P12109 1028 aa21.09■□□□□ 0.97
COL20A1-207ENST00000494913 TRDNQ13061 729 aa21.09■□□□□ 0.97
COL20A1-207ENST00000494913 MSL3Q8N5Y2 521 aaKnown RBP21.09■□□□□ 0.97
COL20A1-207ENST00000494913 CNTN2Q02246 1040 aa21.08■□□□□ 0.97
COL20A1-207ENST00000494913 MUM1L1Q5H9M0 696 aa21.08■□□□□ 0.97
COL20A1-207ENST00000494913 MAMDC4Q6UXC1 1216 aa21.08■□□□□ 0.97
COL20A1-207ENST00000494913 CYB5R4Q7L1T6 521 aa21.08■□□□□ 0.97
COL20A1-207ENST00000494913 ZNF467Q7Z7K2 595 aaPredicted RBP21.08■□□□□ 0.97
COL20A1-207ENST00000494913 ARRDC4Q8NCT1 418 aa21.08■□□□□ 0.97
COL20A1-207ENST00000494913 MAP4K1Q92918 833 aa21.08■□□□□ 0.97
COL20A1-207ENST00000494913 CCDC136Q96JN2 1154 aa21.08■□□□□ 0.97
COL20A1-207ENST00000494913 A1CFQ9NQ94 594 aaKnown RBP21.08■□□□□ 0.97
COL20A1-207ENST00000494913 SYNGAP1Q96PV0 1343 aa21.08■□□□□ 0.96
COL20A1-207ENST00000494913 DNAH12Q6ZR08 3092 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 POTEB2H3BUK9 544 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 SNAI1O95863 264 aaPredicted RBP21.07■□□□□ 0.96
COL20A1-207ENST00000494913 MYCNP04198 464 aaPredicted RBP21.07■□□□□ 0.96
COL20A1-207ENST00000494913 ZNF865P0CJ78 1059 aaPredicted RBP21.07■□□□□ 0.96
COL20A1-207ENST00000494913 GPATCH4Q5T3I0 446 aaKnown RBP21.07■□□□□ 0.96
COL20A1-207ENST00000494913 GJC2Q5T442 439 aaPredicted RBP21.07■□□□□ 0.96
COL20A1-207ENST00000494913 KIAA1211Q6ZU35 1233 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 FGD4Q96M96 766 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 TAF6LQ9Y6J9 622 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 SMCHD1A6NHR9 2005 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 DNM1LO00429 736 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 BMP2KLQ5H9B9 411 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 IFIT1BQ5T764 474 aaKnown RBP21.07■□□□□ 0.96
COL20A1-207ENST00000494913 SENP6Q9GZR1 1112 aaPredicted RBP21.07■□□□□ 0.96
COL20A1-207ENST00000494913 UBA5Q9GZZ9 404 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 CPVLQ9H3G5 476 aa21.07■□□□□ 0.96
COL20A1-207ENST00000494913 FRMPD3Q5JV73 1810 aa21.06■□□□□ 0.96
COL20A1-207ENST00000494913 E7EWF7 191 aa21.06■□□□□ 0.96
COL20A1-207ENST00000494913 RARBP10826 455 aa21.06■□□□□ 0.96
COL20A1-207ENST00000494913 NSMFQ6X4W1 530 aa21.06■□□□□ 0.96
COL20A1-207ENST00000494913 C7orf61Q8IZ16 206 aa21.06■□□□□ 0.96
COL20A1-207ENST00000494913 FAM133AQ8N9E0 248 aa21.06■□□□□ 0.96
COL20A1-207ENST00000494913 ESYT1Q9BSJ8 1104 aa21.06■□□□□ 0.96
COL20A1-207ENST00000494913 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.06■□□□□ 0.96
COL20A1-207ENST00000494913 RBM8AQ9Y5S9 174 aaKnown RBP21.06■□□□□ 0.96
COL20A1-207ENST00000494913 ARMCX2Q7L311 632 aa21.05■□□□□ 0.96
COL20A1-207ENST00000494913 RALYLQ86SE5 291 aaKnown RBP21.05■□□□□ 0.96
COL20A1-207ENST00000494913 CCDC144CPQ8IYA2 1237 aa21.05■□□□□ 0.96
COL20A1-207ENST00000494913 XPNPEP3Q9NQH7 507 aa21.05■□□□□ 0.96
COL20A1-207ENST00000494913 CYP39A1Q9NYL5 469 aa21.05■□□□□ 0.96
COL20A1-207ENST00000494913 ZHX1Q9UKY1 873 aaPredicted RBP21.05■□□□□ 0.96
COL20A1-207ENST00000494913 COLQQ9Y215 455 aaPredicted RBP21.05■□□□□ 0.96
COL20A1-207ENST00000494913 SOWAHBA6NEL2 793 aa21.04■□□□□ 0.96
COL20A1-207ENST00000494913 KBTBD13C9JR72 458 aa21.04■□□□□ 0.96
COL20A1-207ENST00000494913 PARP1P09874 1014 aaKnown RBP21.04■□□□□ 0.96
COL20A1-207ENST00000494913 AKR1A1P14550 325 aa21.04■□□□□ 0.96
COL20A1-207ENST00000494913 ACVR2BQ13705 512 aa21.04■□□□□ 0.96
COL20A1-207ENST00000494913 SEC23AQ15436 765 aa21.04■□□□□ 0.96
COL20A1-207ENST00000494913 STOX1Q6ZVD7 989 aa21.04■□□□□ 0.96
COL20A1-207ENST00000494913 NCOA7Q8NI08 942 aa21.04■□□□□ 0.96
COL20A1-207ENST00000494913 LSG1Q9H089 658 aaKnown RBP21.04■□□□□ 0.96
COL20A1-207ENST00000494913 FAM184BQ9ULE4 1060 aa21.04■□□□□ 0.96
COL20A1-207ENST00000494913 ALPK3Q96L96 1907 aa21.03■□□□□ 0.96
COL20A1-207ENST00000494913 LRRC41Q15345 812 aa21.03■□□□□ 0.96
COL20A1-207ENST00000494913 LRRC26Q2I0M4 334 aa21.03■□□□□ 0.96
COL20A1-207ENST00000494913 ASPRV1Q53RT3 343 aa21.03■□□□□ 0.96
COL20A1-207ENST00000494913 CHRDL2Q6WN34 429 aa21.03■□□□□ 0.96
COL20A1-207ENST00000494913 LENG1Q96BZ8 264 aaPredicted RBP21.03■□□□□ 0.96
COL20A1-207ENST00000494913 ABHD16BQ9H3Z7 469 aa21.03■□□□□ 0.96
COL20A1-207ENST00000494913 PNMA2Q9UL42 364 aa21.03■□□□□ 0.96
COL20A1-207ENST00000494913 NFIBO00712 420 aa21.02■□□□□ 0.96
COL20A1-207ENST00000494913 IFIT3O14879 490 aaKnown RBP21.02■□□□□ 0.96
COL20A1-207ENST00000494913 PGK1P00558 417 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms