RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 SEPT2Q15019 361 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 TMC4Q7Z404 712 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 PODNQ7Z5L7 613 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 POTEDQ86YR6 584 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 TBCKQ8TEA7 893 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 SMCHD1A6NHR9 2005 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 NKRFO15226 690 aaKnown RBP eCLIP11.81□□□□□ -0.52
SAMM50-206ENST00000494795 SLC37A4O43826 429 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 TDP2O95551 362 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 CFAP100Q494V2 611 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 HHIPL2Q6UWX4 724 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
SAMM50-206ENST00000494795 HPS3Q969F9 1004 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 ZDHHC15Q96MV8 337 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 SPZ1Q9BXG8 430 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 TEX33O43247 280 aa11.8□□□□□ -0.52
SAMM50-206ENST00000494795 PPIP5K2O43314 1243 aa11.8□□□□□ -0.52
SAMM50-206ENST00000494795 EEF2P13639 858 aaKnown RBP11.8□□□□□ -0.52
SAMM50-206ENST00000494795 DHX8Q14562 1220 aaKnown RBP11.8□□□□□ -0.52
SAMM50-206ENST00000494795 RRP36Q96EU6 259 aaKnown RBP11.8□□□□□ -0.52
SAMM50-206ENST00000494795 P2RX7Q99572 595 aaKnown RBP11.8□□□□□ -0.52
SAMM50-206ENST00000494795 TCP10L2B9ZVM9 353 aa11.8□□□□□ -0.52
SAMM50-206ENST00000494795 KCNA3P22001 575 aa11.8□□□□□ -0.52
SAMM50-206ENST00000494795 TECP42680 631 aa11.8□□□□□ -0.52
SAMM50-206ENST00000494795 SPICE1Q8N0Z3 855 aa11.8□□□□□ -0.52
SAMM50-206ENST00000494795 FERMT2Q96AC1 680 aa11.8□□□□□ -0.52
SAMM50-206ENST00000494795 RIOX1Q9H6W3 641 aa11.8□□□□□ -0.52
SAMM50-206ENST00000494795 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 IKBKBO14920 756 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 TTLL1O95922 423 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 CCDC96Q2M329 555 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 STRIP1Q5VSL9 837 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
SAMM50-206ENST00000494795 NUDT12Q9BQG2 462 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 TRIM49BA6NDI0 452 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 CALML3P27482 149 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 PMS1P54277 932 aaKnown RBP11.79□□□□□ -0.52
SAMM50-206ENST00000494795 ZNF543Q08ER8 600 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 NAA30Q147X3 362 aaPredicted RBP11.79□□□□□ -0.52
SAMM50-206ENST00000494795 KIAA1755Q5JYT7 1200 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L6PQ6QN14 398 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 FLAD1Q8NFF5 587 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 ZMYND15Q9H091 742 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
SAMM50-206ENST00000494795 ZNF287Q9HBT7 754 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 ZNF646O15015 1829 aaPredicted RBP11.79□□□□□ -0.52
SAMM50-206ENST00000494795 SNHG28P0DPA3 235 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 DPEP1P16444 411 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 GNAQP50148 359 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 SLC30A10Q6XR72 485 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 CREBRFQ8IUR6 639 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 SH3GLB2Q9NR46 395 aa11.79□□□□□ -0.52
SAMM50-206ENST00000494795 MYH8P13535 1937 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 ZNF18P17022 549 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 CEP135Q66GS9 1140 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 STYK1Q6J9G0 422 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
SAMM50-206ENST00000494795 SEC63Q9UGP8 760 aaKnown RBP11.78□□□□□ -0.52
SAMM50-206ENST00000494795 CTNND2Q9UQB3 1225 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 QSER1Q2KHR3 1735 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 SMTNL1A8MU46 457 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 TXKP42681 527 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 ECE1P42892 770 aa11.78□□□□□ -0.52
SAMM50-206ENST00000494795 ADKP55263 362 aaKnown RBP11.78□□□□□ -0.52
SAMM50-206ENST00000494795 E4F1Q66K89 784 aaPredicted RBP11.78□□□□□ -0.52
SAMM50-206ENST00000494795 APTXQ7Z2E3 356 aaKnown RBP11.78□□□□□ -0.52
SAMM50-206ENST00000494795 MMTAG2Q9BU76 263 aaKnown RBP11.78□□□□□ -0.52
SAMM50-206ENST00000494795 POTEMA6NI47 508 aa11.77□□□□□ -0.52
SAMM50-206ENST00000494795 PSMD14O00487 310 aa11.77□□□□□ -0.52
SAMM50-206ENST00000494795 ZBTB7AO95365 584 aa11.77□□□□□ -0.52
SAMM50-206ENST00000494795 DTHD1Q6ZMT9 781 aa11.77□□□□□ -0.52
SAMM50-206ENST00000494795 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.52
SAMM50-206ENST00000494795 ZNF592Q92610 1267 aa11.77□□□□□ -0.52
SAMM50-206ENST00000494795 STK32BQ9NY57 414 aa11.77□□□□□ -0.52
SAMM50-206ENST00000494795 EGFRP00533 1210 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 TRAPPC10P48553 1259 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 CERKLQ49MI3 558 aaPredicted RBP11.77□□□□□ -0.53
SAMM50-206ENST00000494795 MIGA2Q7L4E1 593 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 DAGLBQ8NCG7 672 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.53
SAMM50-206ENST00000494795 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 A0A0U1RQJ8 604 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 GH2P01242 217 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 TNNI2P48788 182 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 ECM1Q16610 540 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 RASSF8Q8NHQ8 419 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 ATRIPQ8WXE1 791 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 DISC1Q9NRI5 854 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 MYH4Q9Y623 1939 aa11.77□□□□□ -0.53
SAMM50-206ENST00000494795 PLIN4Q96Q06 1357 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms