RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CCDC178Q5BJE1 867 aa39.03■■■■□ 3.84
CBX4-203ENST00000494546 DGKHQ86XP1 1220 aa39.03■■■■□ 3.84
CBX4-203ENST00000494546 KRT23Q9C075 422 aa39.03■■■■□ 3.84
CBX4-203ENST00000494546 NRBP1Q9UHY1 535 aa39.03■■■■□ 3.84
CBX4-203ENST00000494546 COL6A1P12109 1028 aa39.02■■■■□ 3.84
CBX4-203ENST00000494546 SYDE2Q5VT97 1194 aa39.02■■■■□ 3.84
CBX4-203ENST00000494546 BTNL9Q6UXG8 535 aa39.02■■■■□ 3.84
CBX4-203ENST00000494546 CNNM2Q9H8M5 875 aa39.02■■■■□ 3.84
CBX4-203ENST00000494546 PTH1RQ03431 593 aa39.01■■■■□ 3.84
CBX4-203ENST00000494546 TKFCQ3LXA3 575 aa39.01■■■■□ 3.84
CBX4-203ENST00000494546 TRERF1Q96PN7 1200 aa39.01■■■■□ 3.84
CBX4-203ENST00000494546 ZSCAN10Q96SZ4 725 aaPredicted RBP39.01■■■■□ 3.84
CBX4-203ENST00000494546 ZSWIM5Q9P217 1185 aa39.01■■■■□ 3.84
CBX4-203ENST00000494546 CNPY2Q9Y2B0 182 aa39.01■■■■□ 3.84
CBX4-203ENST00000494546 TAL1P17542 331 aaPredicted RBP39■■■■□ 3.83
CBX4-203ENST00000494546 ZNF543Q08ER8 600 aa39■■■■□ 3.83
CBX4-203ENST00000494546 CENPQQ7L2Z9 268 aaPredicted RBP39■■■■□ 3.83
CBX4-203ENST00000494546 C7orf61Q8IZ16 206 aa39■■■■□ 3.83
CBX4-203ENST00000494546 CCPG1Q9ULG6 757 aa39■■■■□ 3.83
CBX4-203ENST00000494546 SGSM2O43147 1006 aa38.99■■■■□ 3.83
CBX4-203ENST00000494546 MYCNP04198 464 aaPredicted RBP38.99■■■■□ 3.83
CBX4-203ENST00000494546 MSL3Q8N5Y2 521 aaKnown RBP38.99■■■■□ 3.83
CBX4-203ENST00000494546 RANBP17Q9H2T7 1088 aaKnown RBP38.99■■■■□ 3.83
CBX4-203ENST00000494546 COLQQ9Y215 455 aaPredicted RBP38.99■■■■□ 3.83
CBX4-203ENST00000494546 GJC2Q5T442 439 aaPredicted RBP38.98■■■■□ 3.83
CBX4-203ENST00000494546 ARRDC4Q8NCT1 418 aa38.98■■■■□ 3.83
CBX4-203ENST00000494546 KAT14Q9H8E8 782 aa38.98■■■■□ 3.83
CBX4-203ENST00000494546 ALPK3Q96L96 1907 aa38.97■■■■□ 3.83
CBX4-203ENST00000494546 SYNGAP1Q96PV0 1343 aa38.97■■■■□ 3.83
CBX4-203ENST00000494546 DNM1LO00429 736 aa38.97■■■■□ 3.83
CBX4-203ENST00000494546 ICAM1P05362 532 aa38.97■■■■□ 3.83
CBX4-203ENST00000494546 SNHG28P0DPA3 235 aa38.97■■■■□ 3.83
CBX4-203ENST00000494546 MAMDC4Q6UXC1 1216 aa38.97■■■■□ 3.83
CBX4-203ENST00000494546 ZNF467Q7Z7K2 595 aaPredicted RBP38.97■■■■□ 3.83
CBX4-203ENST00000494546 PNMA1Q8ND90 353 aa38.97■■■■□ 3.83
CBX4-203ENST00000494546 UBAC1Q9BSL1 405 aa38.97■■■■□ 3.83
CBX4-203ENST00000494546 SENP6Q9GZR1 1112 aaPredicted RBP38.97■■■■□ 3.83
CBX4-203ENST00000494546 A1CFQ9NQ94 594 aaKnown RBP38.97■■■■□ 3.83
CBX4-203ENST00000494546 TNKSO95271 1327 aa38.96■■■■□ 3.83
CBX4-203ENST00000494546 ZNF865P0CJ78 1059 aaPredicted RBP38.96■■■■□ 3.83
CBX4-203ENST00000494546 MUM1L1Q5H9M0 696 aa38.96■■■■□ 3.83
CBX4-203ENST00000494546 HABP4Q5JVS0 413 aaKnown RBP38.96■■■■□ 3.83
CBX4-203ENST00000494546 CHRDL2Q6WN34 429 aa38.96■■■■□ 3.83
CBX4-203ENST00000494546 ENAHQ8N8S7 591 aaPredicted RBP38.96■■■■□ 3.83
CBX4-203ENST00000494546 U3KPZ7 1027 aaPredicted RBP38.96■■■■□ 3.83
CBX4-203ENST00000494546 POTEB2H3BUK9 544 aa38.95■■■■□ 3.83
CBX4-203ENST00000494546 SNAI1O95863 264 aaPredicted RBP38.95■■■■□ 3.83
CBX4-203ENST00000494546 SKAP1Q86WV1 359 aa38.95■■■■□ 3.83
CBX4-203ENST00000494546 ANKS1AQ92625 1134 aa38.95■■■■□ 3.83
CBX4-203ENST00000494546 FGD4Q96M96 766 aa38.95■■■■□ 3.83
CBX4-203ENST00000494546 GOLGA8HP0CJ92 632 aa38.94■■■■□ 3.82
CBX4-203ENST00000494546 RARBP10826 455 aa38.94■■■■□ 3.82
CBX4-203ENST00000494546 CNTN2Q02246 1040 aa38.94■■■■□ 3.82
CBX4-203ENST00000494546 ZHX1Q9UKY1 873 aaPredicted RBP38.94■■■■□ 3.82
CBX4-203ENST00000494546 KBTBD13C9JR72 458 aa38.93■■■■□ 3.82
CBX4-203ENST00000494546 CYP21A2P08686 494 aa38.93■■■■□ 3.82
CBX4-203ENST00000494546 TRDNQ13061 729 aa38.93■■■■□ 3.82
CBX4-203ENST00000494546 GPATCH4Q5T3I0 446 aaKnown RBP38.93■■■■□ 3.82
CBX4-203ENST00000494546 AKR1A1P14550 325 aa38.92■■■■□ 3.82
CBX4-203ENST00000494546 LRRC26Q2I0M4 334 aa38.92■■■■□ 3.82
CBX4-203ENST00000494546 FAM133AQ8N9E0 248 aa38.92■■■■□ 3.82
CBX4-203ENST00000494546 XPNPEP3Q9NQH7 507 aa38.92■■■■□ 3.82
CBX4-203ENST00000494546 CDKN2AIPQ9NXV6 580 aaPredicted RBP38.92■■■■□ 3.82
CBX4-203ENST00000494546 CEP290O15078 2479 aa38.92■■■■□ 3.82
CBX4-203ENST00000494546 NSMFQ6X4W1 530 aa38.91■■■■□ 3.82
CBX4-203ENST00000494546 ZMYND8Q9ULU4 1186 aaPredicted RBP38.91■■■■□ 3.82
CBX4-203ENST00000494546 CYB5R4Q7L1T6 521 aa38.9■■■■□ 3.82
CBX4-203ENST00000494546 ARMCX2Q7L311 632 aa38.9■■■■□ 3.82
CBX4-203ENST00000494546 LENG1Q96BZ8 264 aaPredicted RBP38.9■■■■□ 3.82
CBX4-203ENST00000494546 ATN1P54259 1190 aaPredicted RBP38.89■■■■□ 3.82
CBX4-203ENST00000494546 LRRC41Q15345 812 aa38.89■■■■□ 3.82
CBX4-203ENST00000494546 IFIT1BQ5T764 474 aaKnown RBP38.89■■■■□ 3.82
CBX4-203ENST00000494546 CCDC144CPQ8IYA2 1237 aa38.89■■■■□ 3.82
CBX4-203ENST00000494546 UBA5Q9GZZ9 404 aa38.89■■■■□ 3.82
CBX4-203ENST00000494546 CPVLQ9H3G5 476 aa38.89■■■■□ 3.82
CBX4-203ENST00000494546 FAM184BQ9ULE4 1060 aa38.89■■■■□ 3.82
CBX4-203ENST00000494546 SOWAHBA6NEL2 793 aa38.88■■■■□ 3.81
CBX4-203ENST00000494546 ACVR2BQ13705 512 aa38.88■■■■□ 3.81
CBX4-203ENST00000494546 CYP39A1Q9NYL5 469 aa38.88■■■■□ 3.81
CBX4-203ENST00000494546 SMCHD1A6NHR9 2005 aa38.87■■■■□ 3.81
CBX4-203ENST00000494546 PGK1P00558 417 aa38.87■■■■□ 3.81
CBX4-203ENST00000494546 KIAA1211Q6ZU35 1233 aa38.87■■■■□ 3.81
CBX4-203ENST00000494546 MAP4K1Q92918 833 aa38.87■■■■□ 3.81
CBX4-203ENST00000494546 ABHD16BQ9H3Z7 469 aa38.87■■■■□ 3.81
CBX4-203ENST00000494546 TAF6LQ9Y6J9 622 aa38.87■■■■□ 3.81
CBX4-203ENST00000494546 SYN1P17600 705 aa38.86■■■■□ 3.81
CBX4-203ENST00000494546 RALYLQ86SE5 291 aaKnown RBP38.86■■■■□ 3.81
CBX4-203ENST00000494546 RBM8AQ9Y5S9 174 aaKnown RBP38.86■■■■□ 3.81
CBX4-203ENST00000494546 NFIBO00712 420 aa38.85■■■■□ 3.81
CBX4-203ENST00000494546 ASPRV1Q53RT3 343 aa38.85■■■■□ 3.81
CBX4-203ENST00000494546 RBM27Q9P2N5 1060 aaKnown RBP38.85■■■■□ 3.81
CBX4-203ENST00000494546 PNMA2Q9UL42 364 aa38.85■■■■□ 3.81
CBX4-203ENST00000494546 E7EWF7 191 aa38.84■■■■□ 3.81
CBX4-203ENST00000494546 PARP1P09874 1014 aaKnown RBP38.84■■■■□ 3.81
CBX4-203ENST00000494546 ADCYAP1R1P41586 468 aa38.84■■■■□ 3.81
CBX4-203ENST00000494546 SEC23AQ15436 765 aa38.84■■■■□ 3.81
CBX4-203ENST00000494546 RNF180Q86T96 592 aa38.84■■■■□ 3.81
CBX4-203ENST00000494546 ASB14A6NK59 587 aa38.83■■■■□ 3.81
CBX4-203ENST00000494546 NCOA7Q8NI08 942 aa38.83■■■■□ 3.81
CBX4-203ENST00000494546 FERMT2Q96AC1 680 aa38.83■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms