RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 MYCP01106 439 aaPredicted RBP27.39■■□□□ 1.98
CLIC3-203ENST00000494426 INHAP05111 366 aa27.39■■□□□ 1.98
CLIC3-203ENST00000494426 FCER1AP12319 257 aa27.39■■□□□ 1.98
CLIC3-203ENST00000494426 TRIM32Q13049 653 aa27.39■■□□□ 1.98
CLIC3-203ENST00000494426 MMP19Q99542 508 aa27.39■■□□□ 1.98
CLIC3-203ENST00000494426 FLRT1Q9NZU1 646 aa27.39■■□□□ 1.98
CLIC3-203ENST00000494426 MAD2L2Q9UI95 211 aa27.39■■□□□ 1.98
CLIC3-203ENST00000494426 PALM3A6NDB9 673 aaPredicted RBP27.38■■□□□ 1.97
CLIC3-203ENST00000494426 GRM4Q14833 912 aa27.38■■□□□ 1.97
CLIC3-203ENST00000494426 DHX32Q7L7V1 743 aaKnown RBP27.38■■□□□ 1.97
CLIC3-203ENST00000494426 BIN2Q9UBW5 565 aaPredicted RBP27.38■■□□□ 1.97
CLIC3-203ENST00000494426 WDR19Q8NEZ3 1342 aa27.38■■□□□ 1.97
CLIC3-203ENST00000494426 IGHA2P01877 340 aa27.37■■□□□ 1.97
CLIC3-203ENST00000494426 TAL1P17542 331 aaPredicted RBP27.37■■□□□ 1.97
CLIC3-203ENST00000494426 LIFRP42702 1097 aa27.37■■□□□ 1.97
CLIC3-203ENST00000494426 SOX10P56693 466 aa27.37■■□□□ 1.97
CLIC3-203ENST00000494426 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.37■■□□□ 1.97
CLIC3-203ENST00000494426 TCEANC2Q96MN5 208 aa27.37■■□□□ 1.97
CLIC3-203ENST00000494426 RBBP6Q7Z6E9 1792 aaKnown RBP27.36■■□□□ 1.97
CLIC3-203ENST00000494426 HMGCRP04035 888 aa27.36■■□□□ 1.97
CLIC3-203ENST00000494426 ICAM1P05362 532 aa27.36■■□□□ 1.97
CLIC3-203ENST00000494426 UBXN2AP68543 259 aa27.36■■□□□ 1.97
CLIC3-203ENST00000494426 DPP9Q86TI2 863 aa27.36■■□□□ 1.97
CLIC3-203ENST00000494426 ADGRF4Q8IZF3 695 aa27.36■■□□□ 1.97
CLIC3-203ENST00000494426 ZNF654Q8IZM8 581 aa27.36■■□□□ 1.97
CLIC3-203ENST00000494426 TMTC2Q8N394 836 aa27.36■■□□□ 1.97
CLIC3-203ENST00000494426 CHST13Q8NET6 341 aa27.36■■□□□ 1.97
CLIC3-203ENST00000494426 KLRF2D3W0D1 207 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 PGK2P07205 417 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 CPA1P15085 419 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 KCTD2Q14681 263 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 SLC35G1Q2M3R5 365 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 TKFCQ3LXA3 575 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 CATIPQ7Z7H3 387 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 TRMT44Q8IYL2 757 aaKnown RBP27.35■■□□□ 1.97
CLIC3-203ENST00000494426 JAKMIP1Q96N16 626 aaKnown RBP27.35■■□□□ 1.97
CLIC3-203ENST00000494426 MYL10Q9BUA6 226 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 HOMER2Q9NSB8 354 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 RNF146Q9NTX7 359 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 CCPG1Q9ULG6 757 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 PLXNA1Q9UIW2 1896 aa27.35■■□□□ 1.97
CLIC3-203ENST00000494426 ALAS1P13196 640 aa27.34■■□□□ 1.97
CLIC3-203ENST00000494426 CCL5P13501 91 aa27.34■■□□□ 1.97
CLIC3-203ENST00000494426 TRERF1Q96PN7 1200 aa27.34■■□□□ 1.97
CLIC3-203ENST00000494426 UNC93B1Q9H1C4 597 aa27.34■■□□□ 1.97
CLIC3-203ENST00000494426 JMJD4Q9H9V9 463 aa27.34■■□□□ 1.97
CLIC3-203ENST00000494426 FBXO40Q9UH90 709 aa27.34■■□□□ 1.97
CLIC3-203ENST00000494426 DNAJC25-GNG10A0A024R161 153 aa27.33■■□□□ 1.97
CLIC3-203ENST00000494426 POTEFA5A3E0 1075 aa27.33■■□□□ 1.97
CLIC3-203ENST00000494426 HMGB1P09429 215 aaKnown RBP27.33■■□□□ 1.97
CLIC3-203ENST00000494426 ZNF792Q3KQV3 632 aa27.33■■□□□ 1.97
CLIC3-203ENST00000494426 MUM1L1Q5H9M0 696 aa27.33■■□□□ 1.97
CLIC3-203ENST00000494426 MAP3K21Q5TCX8 1036 aa27.33■■□□□ 1.97
CLIC3-203ENST00000494426 NFXL1Q6ZNB6 911 aa27.33■■□□□ 1.97
CLIC3-203ENST00000494426 SGMS1Q86VZ5 419 aa27.33■■□□□ 1.97
CLIC3-203ENST00000494426 VAT1LQ9HCJ6 419 aa27.33■■□□□ 1.97
CLIC3-203ENST00000494426 CCDC69A6NI79 296 aa27.32■■□□□ 1.96
CLIC3-203ENST00000494426 DDAH1O94760 285 aa27.32■■□□□ 1.96
CLIC3-203ENST00000494426 SEC24BO95487 1268 aa27.32■■□□□ 1.96
CLIC3-203ENST00000494426 CDC37Q16543 378 aaPredicted RBP27.32■■□□□ 1.96
CLIC3-203ENST00000494426 NUP133Q8WUM0 1156 aa27.32■■□□□ 1.96
CLIC3-203ENST00000494426 MAP3K14Q99558 947 aa27.32■■□□□ 1.96
CLIC3-203ENST00000494426 ACAD9Q9H845 621 aa27.32■■□□□ 1.96
CLIC3-203ENST00000494426 CACNB2Q08289 660 aaPredicted RBP27.31■■□□□ 1.96
CLIC3-203ENST00000494426 OLFML2BQ68BL8 750 aa27.31■■□□□ 1.96
CLIC3-203ENST00000494426 MTMR8Q96EF0 704 aa27.31■■□□□ 1.96
CLIC3-203ENST00000494426 MAML3Q96JK9 1138 aa27.31■■□□□ 1.96
CLIC3-203ENST00000494426 TMEM106CQ9BVX2 250 aa27.31■■□□□ 1.96
CLIC3-203ENST00000494426 RNF208Q9H0X6 261 aa27.31■■□□□ 1.96
CLIC3-203ENST00000494426 MYH6P13533 1939 aa27.3■■□□□ 1.96
CLIC3-203ENST00000494426 BLOC1S2Q6QNY1 142 aa27.3■■□□□ 1.96
CLIC3-203ENST00000494426 ANKRD35Q8N283 1001 aa27.3■■□□□ 1.96
CLIC3-203ENST00000494426 DDX11Q96FC9 970 aa27.3■■□□□ 1.96
CLIC3-203ENST00000494426 RIOX1Q9H6W3 641 aa27.3■■□□□ 1.96
CLIC3-203ENST00000494426 A1CFQ9NQ94 594 aaKnown RBP27.3■■□□□ 1.96
CLIC3-203ENST00000494426 SLC5A4Q9NY91 659 aa27.3■■□□□ 1.96
CLIC3-203ENST00000494426 BRPF3Q9ULD4 1205 aa27.3■■□□□ 1.96
CLIC3-203ENST00000494426 DIS3Q9Y2L1 958 aaKnown RBP27.3■■□□□ 1.96
CLIC3-203ENST00000494426 CYTH3O43739 400 aa27.29■■□□□ 1.96
CLIC3-203ENST00000494426 PRKAR2AP13861 404 aaKnown RBP27.29■■□□□ 1.96
CLIC3-203ENST00000494426 RXRAP19793 462 aa27.29■■□□□ 1.96
CLIC3-203ENST00000494426 RPS6KB1P23443 525 aa27.29■■□□□ 1.96
CLIC3-203ENST00000494426 QRICH1Q2TAL8 776 aa27.29■■□□□ 1.96
CLIC3-203ENST00000494426 RAB11FIP4Q86YS3 637 aa27.29■■□□□ 1.96
CLIC3-203ENST00000494426 CLEC4DQ8WXI8 215 aa27.29■■□□□ 1.96
CLIC3-203ENST00000494426 SLC12A7Q9Y666 1083 aa27.29■■□□□ 1.96
CLIC3-203ENST00000494426 RPTORQ8N122 1335 aa27.28■■□□□ 1.96
CLIC3-203ENST00000494426 DHX16O60231 1041 aaKnown RBP27.28■■□□□ 1.96
CLIC3-203ENST00000494426 CYP2C19P33261 490 aa27.28■■□□□ 1.96
CLIC3-203ENST00000494426 C8orf34Q49A92 452 aa27.28■■□□□ 1.96
CLIC3-203ENST00000494426 FGD4Q96M96 766 aa27.28■■□□□ 1.96
CLIC3-203ENST00000494426 PAK6Q9NQU5 681 aaPredicted RBP27.28■■□□□ 1.96
CLIC3-203ENST00000494426 PNMA2Q9UL42 364 aa27.28■■□□□ 1.96
CLIC3-203ENST00000494426 GJB1P08034 283 aa27.27■■□□□ 1.96
CLIC3-203ENST00000494426 EN2P19622 333 aaPredicted RBP27.27■■□□□ 1.96
CLIC3-203ENST00000494426 CASTP20810 708 aaKnown RBP27.27■■□□□ 1.96
CLIC3-203ENST00000494426 PSMA5P28066 241 aa27.27■■□□□ 1.96
CLIC3-203ENST00000494426 RGS19P49795 217 aa27.27■■□□□ 1.96
CLIC3-203ENST00000494426 MFSD14CQ5VZR4 134 aa27.27■■□□□ 1.96
CLIC3-203ENST00000494426 Q6ZUG5 572 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms