RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 LSG1Q9H089 658 aaKnown RBP17.26■□□□□ 0.35
ATG4B-224ENST00000494132 KAT14Q9H8E8 782 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 CNNM2Q9H8M5 875 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 RNF146Q9NTX7 359 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 E7EWF7 191 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 IGHA2P01877 340 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 CYBAP13498 195 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 OAZ1P54368 228 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 ZNF543Q08ER8 600 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 LHX8Q68G74 356 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 KIAA1211Q6ZU35 1233 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 MAP4K1Q92918 833 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 CEP290O15078 2479 aa17.25■□□□□ 0.35
ATG4B-224ENST00000494132 SNHG28P0DPA3 235 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 FDX1P10109 184 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 MNX1P50219 401 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-224ENST00000494132 TRDNQ13061 729 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 MUM1L1Q5H9M0 696 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 BTNL9Q6UXG8 535 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 CHST13Q8NET6 341 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 TRERF1Q96PN7 1200 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 UBA5Q9GZZ9 404 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 RANBP17Q9H2T7 1088 aaKnown RBP17.24■□□□□ 0.35
ATG4B-224ENST00000494132 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 DDX20Q9UHI6 824 aaKnown RBP17.24■□□□□ 0.35
ATG4B-224ENST00000494132 OGDHLQ9ULD0 1010 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 CCPG1Q9ULG6 757 aa17.24■□□□□ 0.35
ATG4B-224ENST00000494132 SEC23AQ15436 765 aa17.23■□□□□ 0.35
ATG4B-224ENST00000494132 CCDC178Q5BJE1 867 aa17.23■□□□□ 0.35
ATG4B-224ENST00000494132 IFIT1BQ5T764 474 aaKnown RBP17.23■□□□□ 0.35
ATG4B-224ENST00000494132 RALYLQ86SE5 291 aaKnown RBP17.23■□□□□ 0.35
ATG4B-224ENST00000494132 DPF3Q92784 378 aa17.23■□□□□ 0.35
ATG4B-224ENST00000494132 TINF2Q9BSI4 451 aa17.23■□□□□ 0.35
ATG4B-224ENST00000494132 ACAD9Q9H845 621 aa17.23■□□□□ 0.35
ATG4B-224ENST00000494132 SENP2Q9HC62 589 aa17.23■□□□□ 0.35
ATG4B-224ENST00000494132 LRRC37A2A6NM11 1700 aa17.23■□□□□ 0.35
ATG4B-224ENST00000494132 DNAJC25-GNG10A0A024R161 153 aa17.22■□□□□ 0.35
ATG4B-224ENST00000494132 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-224ENST00000494132 CNTN2Q02246 1040 aa17.22■□□□□ 0.35
ATG4B-224ENST00000494132 COL9A3Q14050 684 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-224ENST00000494132 PRPF38BQ5VTL8 546 aaKnown RBP17.22■□□□□ 0.35
ATG4B-224ENST00000494132 NCOA7Q8NI08 942 aa17.22■□□□□ 0.35
ATG4B-224ENST00000494132 ANKS1AQ92625 1134 aa17.22■□□□□ 0.35
ATG4B-224ENST00000494132 FGD4Q96M96 766 aa17.22■□□□□ 0.35
ATG4B-224ENST00000494132 A1CFQ9NQ94 594 aaKnown RBP17.22■□□□□ 0.35
ATG4B-224ENST00000494132 FBXO40Q9UH90 709 aa17.22■□□□□ 0.35
ATG4B-224ENST00000494132 DDX49Q9Y6V7 483 aaKnown RBP17.22■□□□□ 0.35
ATG4B-224ENST00000494132 IFIT3O14879 490 aaKnown RBP17.21■□□□□ 0.35
ATG4B-224ENST00000494132 CDC45O75419 566 aa17.21■□□□□ 0.35
ATG4B-224ENST00000494132 ICAM1P05362 532 aa17.21■□□□□ 0.35
ATG4B-224ENST00000494132 NT5C2P49902 561 aa17.21■□□□□ 0.35
ATG4B-224ENST00000494132 ANTXR2P58335 489 aa17.21■□□□□ 0.35
ATG4B-224ENST00000494132 NSMFQ6X4W1 530 aa17.21■□□□□ 0.35
ATG4B-224ENST00000494132 NECAB2Q7Z6G3 386 aa17.21■□□□□ 0.35
ATG4B-224ENST00000494132 LENG1Q96BZ8 264 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-224ENST00000494132 PURBQ96QR8 312 aaKnown RBP17.21■□□□□ 0.35
ATG4B-224ENST00000494132 DIS3Q9Y2L1 958 aaKnown RBP17.21■□□□□ 0.35
ATG4B-224ENST00000494132 SLC27A2O14975 620 aa17.2■□□□□ 0.34
ATG4B-224ENST00000494132 DHX16O60231 1041 aaKnown RBP17.2■□□□□ 0.34
ATG4B-224ENST00000494132 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-224ENST00000494132 TKFCQ3LXA3 575 aa17.2■□□□□ 0.34
ATG4B-224ENST00000494132 USH1GQ495M9 461 aa17.2■□□□□ 0.34
ATG4B-224ENST00000494132 GPATCH4Q5T3I0 446 aaKnown RBP17.2■□□□□ 0.34
ATG4B-224ENST00000494132 MB21D2Q8IYB1 491 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-224ENST00000494132 STAG2Q8N3U4 1231 aa17.2■□□□□ 0.34
ATG4B-224ENST00000494132 ANKLE1Q8NAG6 615 aa17.2■□□□□ 0.34
ATG4B-224ENST00000494132 HTATIP2Q9BUP3 242 aa17.2■□□□□ 0.34
ATG4B-224ENST00000494132 PCDH10Q9P2E7 1040 aa17.2■□□□□ 0.34
ATG4B-224ENST00000494132 PFASO15067 1338 aa17.2■□□□□ 0.34
ATG4B-224ENST00000494132 POTEB2H3BUK9 544 aa17.19■□□□□ 0.34
ATG4B-224ENST00000494132 NFIBO00712 420 aa17.19■□□□□ 0.34
ATG4B-224ENST00000494132 SEPT4O43236 478 aa17.19■□□□□ 0.34
ATG4B-224ENST00000494132 SNAI1O95863 264 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-224ENST00000494132 PARP1P09874 1014 aaKnown RBP17.19■□□□□ 0.34
ATG4B-224ENST00000494132 CDC37Q16543 378 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-224ENST00000494132 GJC2Q5T442 439 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-224ENST00000494132 CREB3L3Q68CJ9 461 aa17.19■□□□□ 0.34
ATG4B-224ENST00000494132 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.19■□□□□ 0.34
ATG4B-224ENST00000494132 C11orf49Q9H6J7 331 aa17.19■□□□□ 0.34
ATG4B-224ENST00000494132 VAT1LQ9HCJ6 419 aa17.19■□□□□ 0.34
ATG4B-224ENST00000494132 GPHNQ9NQX3 736 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-224ENST00000494132 ZHX1Q9UKY1 873 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-224ENST00000494132 ERICH2A1L162 156 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 SOWAHBA6NEL2 793 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 H0YGN5 161 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 MSCO60682 206 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 ZNF865P0CJ78 1059 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-224ENST00000494132 WTAPQ15007 396 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 NECTIN1Q15223 517 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 ASPRV1Q53RT3 343 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 TMEM67Q5HYA8 995 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 ARMCX2Q7L311 632 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 ADGRF4Q8IZF3 695 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 FAM133AQ8N9E0 248 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-224ENST00000494132 CNPY2Q9Y2B0 182 aa17.18■□□□□ 0.34
ATG4B-224ENST00000494132 ASTN1O14525 1302 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms