RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 LSG1Q9H089 658 aaKnown RBP26.55■■□□□ 1.84
SNIP1-203ENST00000493916 GPCPD1Q9NPB8 672 aa26.55■■□□□ 1.84
SNIP1-203ENST00000493916 PLXNA1Q9UIW2 1896 aa26.54■■□□□ 1.84
SNIP1-203ENST00000493916 SLC16A2P36021 539 aa26.54■■□□□ 1.84
SNIP1-203ENST00000493916 GPATCH4Q5T3I0 446 aaKnown RBP26.54■■□□□ 1.84
SNIP1-203ENST00000493916 PRPF38BQ5VTL8 546 aaKnown RBP26.54■■□□□ 1.84
SNIP1-203ENST00000493916 TRPV1Q8NER1 839 aa26.54■■□□□ 1.84
SNIP1-203ENST00000493916 ACAD9Q9H845 621 aa26.54■■□□□ 1.84
SNIP1-203ENST00000493916 TAF6LQ9Y6J9 622 aa26.54■■□□□ 1.84
SNIP1-203ENST00000493916 E7EWF7 191 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 MSCO60682 206 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 ICAM1P05362 532 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 CCDC174Q6PII3 467 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 CYB5R4Q7L1T6 521 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 DDX11Q96FC9 970 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 HOMER2Q9NSB8 354 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 RNF146Q9NTX7 359 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 DDX20Q9UHI6 824 aaKnown RBP26.53■■□□□ 1.84
SNIP1-203ENST00000493916 NRBP1Q9UHY1 535 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 FRMPD3Q5JV73 1810 aa26.53■■□□□ 1.84
SNIP1-203ENST00000493916 SNAP25P60880 206 aa26.52■■□□□ 1.84
SNIP1-203ENST00000493916 SEC23AQ15436 765 aa26.52■■□□□ 1.84
SNIP1-203ENST00000493916 ANKRD35Q8N283 1001 aa26.52■■□□□ 1.84
SNIP1-203ENST00000493916 MSL3Q8N5Y2 521 aaKnown RBP26.52■■□□□ 1.84
SNIP1-203ENST00000493916 TINF2Q9BSI4 451 aa26.52■■□□□ 1.84
SNIP1-203ENST00000493916 CENPBP07199 599 aaPredicted RBP26.51■■□□□ 1.83
SNIP1-203ENST00000493916 MNX1P50219 401 aaPredicted RBP26.51■■□□□ 1.83
SNIP1-203ENST00000493916 IFIT1BQ5T764 474 aaKnown RBP26.51■■□□□ 1.83
SNIP1-203ENST00000493916 ERICH6BQ5W0A0 696 aa26.51■■□□□ 1.83
SNIP1-203ENST00000493916 STOX1Q6ZVD7 989 aa26.51■■□□□ 1.83
SNIP1-203ENST00000493916 ZNF467Q7Z7K2 595 aaPredicted RBP26.51■■□□□ 1.83
SNIP1-203ENST00000493916 RALYLQ86SE5 291 aaKnown RBP26.51■■□□□ 1.83
SNIP1-203ENST00000493916 NCOA7Q8NI08 942 aa26.51■■□□□ 1.83
SNIP1-203ENST00000493916 CCPG1Q9ULG6 757 aa26.51■■□□□ 1.83
SNIP1-203ENST00000493916 CDC45O75419 566 aa26.5■■□□□ 1.83
SNIP1-203ENST00000493916 ALAS1P13196 640 aa26.5■■□□□ 1.83
SNIP1-203ENST00000493916 CNGA1P29973 690 aa26.5■■□□□ 1.83
SNIP1-203ENST00000493916 ASPRV1Q53RT3 343 aa26.5■■□□□ 1.83
SNIP1-203ENST00000493916 CASC1Q6TDU7 716 aa26.5■■□□□ 1.83
SNIP1-203ENST00000493916 NECAB2Q7Z6G3 386 aa26.5■■□□□ 1.83
SNIP1-203ENST00000493916 DIS3LQ8TF46 1054 aaKnown RBP26.5■■□□□ 1.83
SNIP1-203ENST00000493916 TRERF1Q96PN7 1200 aa26.5■■□□□ 1.83
SNIP1-203ENST00000493916 HTATIP2Q9BUP3 242 aa26.5■■□□□ 1.83
SNIP1-203ENST00000493916 PNMA2Q9UL42 364 aa26.5■■□□□ 1.83
SNIP1-203ENST00000493916 SYNGAP1Q96PV0 1343 aa26.49■■□□□ 1.83
SNIP1-203ENST00000493916 SEPT4O43236 478 aa26.49■■□□□ 1.83
SNIP1-203ENST00000493916 MAMDC4Q6UXC1 1216 aa26.49■■□□□ 1.83
SNIP1-203ENST00000493916 PAWRQ96IZ0 340 aaKnown RBP26.49■■□□□ 1.83
SNIP1-203ENST00000493916 ANO2Q9NQ90 1003 aa26.49■■□□□ 1.83
SNIP1-203ENST00000493916 A1CFQ9NQ94 594 aaKnown RBP26.49■■□□□ 1.83
SNIP1-203ENST00000493916 PFASO15067 1338 aa26.48■■□□□ 1.83
SNIP1-203ENST00000493916 GOLGA8HP0CJ92 632 aa26.48■■□□□ 1.83
SNIP1-203ENST00000493916 WDR19Q8NEZ3 1342 aa26.47■■□□□ 1.83
SNIP1-203ENST00000493916 MB21D2Q8IYB1 491 aaPredicted RBP26.47■■□□□ 1.83
SNIP1-203ENST00000493916 FGD4Q96M96 766 aa26.47■■□□□ 1.83
SNIP1-203ENST00000493916 SLC27A2O14975 620 aa26.46■■□□□ 1.83
SNIP1-203ENST00000493916 PARP1P09874 1014 aaKnown RBP26.46■■□□□ 1.83
SNIP1-203ENST00000493916 SART3Q15020 963 aaKnown RBP26.46■■□□□ 1.83
SNIP1-203ENST00000493916 NECTIN1Q15223 517 aa26.46■■□□□ 1.83
SNIP1-203ENST00000493916 MUM1L1Q5H9M0 696 aa26.46■■□□□ 1.83
SNIP1-203ENST00000493916 PRAMEF19Q5SWL8 479 aa26.46■■□□□ 1.83
SNIP1-203ENST00000493916 FAM133AQ8N9E0 248 aa26.46■■□□□ 1.83
SNIP1-203ENST00000493916 ERICH2A1L162 156 aa26.45■■□□□ 1.82
SNIP1-203ENST00000493916 POTEB2H3BUK9 544 aa26.45■■□□□ 1.82
SNIP1-203ENST00000493916 IFIT3O14879 490 aaKnown RBP26.45■■□□□ 1.82
SNIP1-203ENST00000493916 ANTXR2P58335 489 aa26.45■■□□□ 1.82
SNIP1-203ENST00000493916 CREB3L3Q68CJ9 461 aa26.45■■□□□ 1.82
SNIP1-203ENST00000493916 C11orf49Q9H6J7 331 aa26.45■■□□□ 1.82
SNIP1-203ENST00000493916 PPP4R2Q9NY27 417 aa26.45■■□□□ 1.82
SNIP1-203ENST00000493916 CYP39A1Q9NYL5 469 aa26.45■■□□□ 1.82
SNIP1-203ENST00000493916 CNPY2Q9Y2B0 182 aa26.45■■□□□ 1.82
SNIP1-203ENST00000493916 ZNF865P0CJ78 1059 aaPredicted RBP26.44■■□□□ 1.82
SNIP1-203ENST00000493916 TAL1P17542 331 aaPredicted RBP26.44■■□□□ 1.82
SNIP1-203ENST00000493916 MTA3Q9BTC8 594 aa26.44■■□□□ 1.82
SNIP1-203ENST00000493916 UBA5Q9GZZ9 404 aa26.44■■□□□ 1.82
SNIP1-203ENST00000493916 SNAI1O95863 264 aaPredicted RBP26.43■■□□□ 1.82
SNIP1-203ENST00000493916 COL6A1P12109 1028 aa26.43■■□□□ 1.82
SNIP1-203ENST00000493916 CNTN2Q02246 1040 aa26.43■■□□□ 1.82
SNIP1-203ENST00000493916 WTAPQ15007 396 aa26.43■■□□□ 1.82
SNIP1-203ENST00000493916 DPF3Q92784 378 aa26.43■■□□□ 1.82
SNIP1-203ENST00000493916 CPVLQ9H3G5 476 aa26.43■■□□□ 1.82
SNIP1-203ENST00000493916 CHST3Q7LGC8 479 aa26.42■■□□□ 1.82
SNIP1-203ENST00000493916 ADGRF4Q8IZF3 695 aa26.42■■□□□ 1.82
SNIP1-203ENST00000493916 IGDCC4Q8TDY8 1250 aa26.42■■□□□ 1.82
SNIP1-203ENST00000493916 DNM1LO00429 736 aa26.41■■□□□ 1.82
SNIP1-203ENST00000493916 AKR1A1P14550 325 aa26.41■■□□□ 1.82
SNIP1-203ENST00000493916 CDC37Q16543 378 aaPredicted RBP26.41■■□□□ 1.82
SNIP1-203ENST00000493916 TMEM67Q5HYA8 995 aa26.41■■□□□ 1.82
SNIP1-203ENST00000493916 NSMFQ6X4W1 530 aa26.41■■□□□ 1.82
SNIP1-203ENST00000493916 CLEC4DQ8WXI8 215 aa26.41■■□□□ 1.82
SNIP1-203ENST00000493916 SENP2Q9HC62 589 aa26.41■■□□□ 1.82
SNIP1-203ENST00000493916 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.41■■□□□ 1.82
SNIP1-203ENST00000493916 MAD2L2Q9UI95 211 aa26.41■■□□□ 1.82
SNIP1-203ENST00000493916 PALM3A6NDB9 673 aaPredicted RBP26.4■■□□□ 1.82
SNIP1-203ENST00000493916 SOWAHBA6NEL2 793 aa26.4■■□□□ 1.82
SNIP1-203ENST00000493916 NFIBO00712 420 aa26.4■■□□□ 1.82
SNIP1-203ENST00000493916 RNF20Q5VTR2 975 aa26.4■■□□□ 1.82
SNIP1-203ENST00000493916 ARMCX2Q7L311 632 aa26.4■■□□□ 1.82
SNIP1-203ENST00000493916 ARRDC4Q8NCT1 418 aa26.4■■□□□ 1.82
SNIP1-203ENST00000493916 ASB14A6NK59 587 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms