RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 VAT1LQ9HCJ6 419 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 SEC63Q9UGP8 760 aaKnown RBP15.59■□□□□ 0.09
VCP-207ENST00000493886 LONP1P36776 959 aaKnown RBP15.58■□□□□ 0.09
VCP-207ENST00000493886 E2F4Q16254 413 aa15.58■□□□□ 0.09
VCP-207ENST00000493886 CFAP100Q494V2 611 aa15.58■□□□□ 0.09
VCP-207ENST00000493886 IQUBQ8NA54 791 aa15.58■□□□□ 0.09
VCP-207ENST00000493886 ENOX1Q8TC92 643 aaKnown RBP15.58■□□□□ 0.09
VCP-207ENST00000493886 PYM1Q9BRP8 204 aaKnown RBP15.58■□□□□ 0.09
VCP-207ENST00000493886 TNS1Q9HBL0 1735 aaKnown RBP15.58■□□□□ 0.08
VCP-207ENST00000493886 CASP1P29466 404 aa15.58■□□□□ 0.08
VCP-207ENST00000493886 DPYDQ12882 1025 aa15.58■□□□□ 0.08
VCP-207ENST00000493886 KMT5BQ4FZB7 885 aa15.58■□□□□ 0.08
VCP-207ENST00000493886 LRRC47Q8N1G4 583 aaKnown RBP15.58■□□□□ 0.08
VCP-207ENST00000493886 PIGSQ96S52 555 aa15.58■□□□□ 0.08
VCP-207ENST00000493886 UBA5Q9GZZ9 404 aa15.58■□□□□ 0.08
VCP-207ENST00000493886 MYO3BQ8WXR4 1341 aa15.58■□□□□ 0.08
VCP-207ENST00000493886 TMEM232C9JQI7 657 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 HLA-DOAP06340 250 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 SHMT1P34896 483 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 EIF6P56537 245 aaKnown RBP15.57■□□□□ 0.08
VCP-207ENST00000493886 RIOX1Q9H6W3 641 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 NFE2L3Q9Y4A8 694 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 FRMPD2Q68DX3 1309 aaPredicted RBP15.57■□□□□ 0.08
VCP-207ENST00000493886 SLX4Q8IY92 1834 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 SMCO2A6NFE2 343 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 NFIAQ12857 509 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 FBXO38Q6PIJ6 1188 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 CLEC10AQ8IUN9 316 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 ZDHHC15Q96MV8 337 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 GSDMAQ96QA5 445 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 TMX1Q9H3N1 280 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 C6orf50Q9HD87 102 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 ZNF219Q9P2Y4 722 aaPredicted RBP15.57■□□□□ 0.08
VCP-207ENST00000493886 TTLL1O95922 423 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 GNA11P29992 359 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 ASPRV1Q53RT3 343 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 STRIP1Q5VSL9 837 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 PDXDC2PQ6P474 469 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 KRT25Q7Z3Z0 450 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 KIAA0825Q8IV33 1275 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 TRMT44Q8IYL2 757 aaKnown RBP15.57■□□□□ 0.08
VCP-207ENST00000493886 CCDC150Q8NCX0 1101 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 TMEM60Q9H2L4 133 aa15.57■□□□□ 0.08
VCP-207ENST00000493886 ECE2O60344 883 aa15.56■□□□□ 0.08
VCP-207ENST00000493886 ERCC5P28715 1186 aaPredicted RBP15.56■□□□□ 0.08
VCP-207ENST00000493886 CHRNA5P30532 468 aa15.56■□□□□ 0.08
VCP-207ENST00000493886 SOGA3Q5TF21 947 aa15.56■□□□□ 0.08
VCP-207ENST00000493886 DTHD1Q6ZMT9 781 aa15.56■□□□□ 0.08
VCP-207ENST00000493886 STAMQ92783 540 aa15.56■□□□□ 0.08
VCP-207ENST00000493886 MED15Q96RN5 788 aa15.56■□□□□ 0.08
VCP-207ENST00000493886 SNHG28P0DPA3 235 aa15.56■□□□□ 0.08
VCP-207ENST00000493886 TXLNAP40222 546 aa15.56■□□□□ 0.08
VCP-207ENST00000493886 FKBP1AP62942 108 aaKnown RBP15.56■□□□□ 0.08
VCP-207ENST00000493886 ERCC6LQ2NKX8 1250 aa15.56■□□□□ 0.08
VCP-207ENST00000493886 CT47A1Q5JQC4 288 aaPredicted RBP15.56■□□□□ 0.08
VCP-207ENST00000493886 LOC102724159A0A0B4J2E5 919 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 ZNF18P17022 549 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 CDC25AP30304 524 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 DHX8Q14562 1220 aaKnown RBP15.55■□□□□ 0.08
VCP-207ENST00000493886 PWP2Q15269 919 aaKnown RBP15.55■□□□□ 0.08
VCP-207ENST00000493886 DACT2Q5SW24 774 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 MRIQ9BWK5 157 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 RGPD3A6NKT7 1758 aaPredicted RBP15.55■□□□□ 0.08
VCP-207ENST00000493886 RGPD4Q7Z3J3 1758 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 SCN9AQ15858 1988 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 SLU7O95391 586 aaKnown RBP15.55■□□□□ 0.08
VCP-207ENST00000493886 NONOQ15233 471 aaKnown RBP eCLIP15.55■□□□□ 0.08
VCP-207ENST00000493886 ZFPM1Q8IX07 1006 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 CNKSR1Q969H4 720 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 PCDHAC2Q9Y5I4 1007 aa15.55■□□□□ 0.08
VCP-207ENST00000493886 LAD1O00515 517 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 SYCP1Q15431 976 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 SLC15A2Q16348 729 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 MTRQ99707 1265 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 EHD4Q9H223 541 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 OGFRQ9NZT2 677 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 DNAI1Q9UI46 699 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 C10orf71Q711Q0 1435 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 ESYT2A0FGR8 921 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 hCG_1984214I3L0E3 225 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 CD44P16070 742 aaKnown RBP15.54■□□□□ 0.08
VCP-207ENST00000493886 KARSQ15046 597 aaKnown RBP15.54■□□□□ 0.08
VCP-207ENST00000493886 VSTM4Q8IW00 320 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 ZNF713Q8N859 430 aaPredicted RBP15.54■□□□□ 0.08
VCP-207ENST00000493886 BLZF1Q9H2G9 400 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 GPCPD1Q9NPB8 672 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 MPHOSPH10O00566 681 aaKnown RBP15.54■□□□□ 0.08
VCP-207ENST00000493886 GTPBP6O43824 516 aaPredicted RBP15.54■□□□□ 0.08
VCP-207ENST00000493886 SLURP2P0DP57 97 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 PRPHP41219 470 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 RBM5P52756 815 aaKnown RBP eCLIP15.54■□□□□ 0.08
VCP-207ENST00000493886 CACNB3P54284 484 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 HDLBPQ00341 1268 aaKnown RBP15.54■□□□□ 0.08
VCP-207ENST00000493886 ERO1AQ96HE7 468 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 FEZ1Q99689 392 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 TRIM34Q9BYJ4 488 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 ST7Q9NRC1 585 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 INTS13Q9NVM9 706 aa15.54■□□□□ 0.08
VCP-207ENST00000493886 DDX41Q9UJV9 622 aaKnown RBP15.54■□□□□ 0.08
VCP-207ENST00000493886 ZNF543Q08ER8 600 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms