RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 SLC9C2Q5TAH2 1124 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 U2AF1L4Q8WU68 220 aaKnown RBP9.12□□□□□ -0.95
RBM39-238ENST00000493853 P2RX7Q99572 595 aaKnown RBP9.12□□□□□ -0.95
RBM39-238ENST00000493853 FEZ1Q99689 392 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 ANTXR1Q9H6X2 564 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 NXF1Q9UBU9 619 aaKnown RBP9.12□□□□□ -0.95
RBM39-238ENST00000493853 SERPINB13Q9UIV8 391 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 RCAN3Q9UKA8 241 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 ZBTB21Q9ULJ3 1066 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 GOLIM4O00461 696 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 SGPL1O95470 568 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 GH2P01242 217 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 INHAP05111 366 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 HOXA7P31268 230 aaPredicted RBP9.11□□□□□ -0.95
RBM39-238ENST00000493853 USP14P54578 494 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 HERVK_113P62684 666 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 PDE3AQ14432 1141 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 ABCB5Q2M3G0 1257 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 HABP4Q5JVS0 413 aaKnown RBP9.11□□□□□ -0.95
RBM39-238ENST00000493853 USP17L2Q6R6M4 530 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 METTL16Q86W50 562 aaKnown RBP9.11□□□□□ -0.95
RBM39-238ENST00000493853 GPRC5AQ8NFJ5 357 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 DEFB118Q96PH6 123 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 PAGR1Q9BTK6 254 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 TMPRSS4Q9NRS4 437 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 ZBTB40Q9NUA8 1239 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 NR2E3Q9Y5X4 410 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 MYH13Q9UKX3 1938 aa9.11□□□□□ -0.95
RBM39-238ENST00000493853 MYH2Q9UKX2 1941 aa9.1□□□□□ -0.95
RBM39-238ENST00000493853 MPHOSPH10O00566 681 aaKnown RBP9.1□□□□□ -0.95
RBM39-238ENST00000493853 FARP2O94887 1054 aaPredicted RBP9.1□□□□□ -0.95
RBM39-238ENST00000493853 MAPK4P31152 587 aa9.1□□□□□ -0.95
RBM39-238ENST00000493853 JAG1P78504 1218 aa9.1□□□□□ -0.95
RBM39-238ENST00000493853 ZYXQ15942 572 aaKnown RBP9.1□□□□□ -0.95
RBM39-238ENST00000493853 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
RBM39-238ENST00000493853 Q6ZVU0 165 aa9.1□□□□□ -0.95
RBM39-238ENST00000493853 AMOTL1Q8IY63 956 aa9.1□□□□□ -0.95
RBM39-238ENST00000493853 GTF3C2Q8WUA4 911 aaPredicted RBP9.1□□□□□ -0.95
RBM39-238ENST00000493853 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.1□□□□□ -0.95
RBM39-238ENST00000493853 EHD4Q9H223 541 aa9.1□□□□□ -0.95
RBM39-238ENST00000493853 DNAJC18Q9H819 358 aa9.1□□□□□ -0.95
RBM39-238ENST00000493853 MCM9Q9NXL9 1143 aa9.1□□□□□ -0.95
RBM39-238ENST00000493853 ZNF532Q9HCE3 1301 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 USP17L15C9J2P7 530 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 USP17L13C9JLJ4 530 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 USP17L11C9JVI0 530 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 USP17L18D6R9N7 530 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 USP17L22D6RA61 530 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 USP17L17D6RBQ6 530 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 USP17L19D6RCP7 530 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 USP17L20D6RJB6 530 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 H0YGN5 161 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 ERVH48-1M5A8F1 160 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 GLRX3O76003 335 aaKnown RBP9.09□□□□□ -0.95
RBM39-238ENST00000493853 HMGCRP04035 888 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 PDE6AP16499 860 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 CYP2B6P20813 491 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 CCNA1P78396 465 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 USP17L24Q0WX57 530 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 NR1H3Q13133 447 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 SHROOM1Q2M3G4 852 aaPredicted RBP9.09□□□□□ -0.95
RBM39-238ENST00000493853 WDR78Q5VTH9 848 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 TATDN1Q6P1N9 297 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.09□□□□□ -0.95
RBM39-238ENST00000493853 SHISA4Q96DD7 197 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 RIOK1Q9BRS2 568 aaKnown RBP9.09□□□□□ -0.95
RBM39-238ENST00000493853 BOLA2Q9H3K6 86 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 PRM3Q9NNZ6 103 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 PAG1Q9NWQ8 432 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 MORF4L1Q9UBU8 362 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 LAMB1P07942 1786 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 HTTP42858 3142 aa9.09□□□□□ -0.95
RBM39-238ENST00000493853 RPTORQ8N122 1335 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 ESPNB1AK53 854 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 ATP5JP18859 108 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 PLCD1P51178 756 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 ERVK-9P63128 1117 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 ERVK-24P63145 666 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 ZSCAN25Q6NSZ9 544 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 SOCS4Q8WXH5 440 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 AGBL1Q96MI9 1066 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 LRRCC1Q9C099 1032 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 KIAA1683Q9H0B3 1180 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 RBPJLQ9UBG7 517 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 GJD2Q9UKL4 321 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 RABGAP1Q9Y3P9 1069 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 IVNS1ABPQ9Y6Y0 642 aa9.08□□□□□ -0.96
RBM39-238ENST00000493853 RGS2P41220 211 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 RELBQ01201 579 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 NECAB2Q7Z6G3 386 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 PLEKHH3Q7Z736 793 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 SIRT2Q8IXJ6 389 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 SDR42E1Q8WUS8 393 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 GPATCH3Q96I76 525 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 PAWRQ96IZ0 340 aaKnown RBP9.07□□□□□ -0.96
RBM39-238ENST00000493853 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.07□□□□□ -0.96
RBM39-238ENST00000493853 ARMT1Q9H993 441 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 TXNRD2Q9NNW7 524 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 DCP1AQ9NPI6 582 aaPredicted RBP9.07□□□□□ -0.96
RBM39-238ENST00000493853 PAK6Q9NQU5 681 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms