RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 DUX4Q9UBX2 424 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 TRPC5Q9UL62 973 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-221ENST00000493795 CPP00450 1065 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 ANXA1P04083 346 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 LIG4P49917 911 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 ARHGEF18Q6ZSZ5 1173 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 DIS3L2Q8IYB7 885 aaKnown RBP8.57□□□□□ -1.04
BRCA1-221ENST00000493795 CEP70Q8NHQ1 597 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 DACH2Q96NX9 599 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 MROH2BQ7Z745 1585 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 CHEK2O96017 543 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 KRT4P19013 534 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 IFRD2Q12894 506 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-221ENST00000493795 IFT88Q13099 833 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 THOC5Q13769 683 aaKnown RBP8.57□□□□□ -1.04
BRCA1-221ENST00000493795 FAM102BQ5T8I3 360 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 KAZNQ674X7 775 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 TTBK2Q6IQ55 1244 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
BRCA1-221ENST00000493795 KLHL29Q96CT2 875 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 MID2Q9UJV3 735 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 GAPVD1Q14C86 1478 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 B4E1Z4 1266 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 IRS4O14654 1257 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-221ENST00000493795 BUB1O43683 1085 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 OCM2P0CE71 109 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 OCMP0CE72 109 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-221ENST00000493795 MSH2P43246 934 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 CYP2J2P51589 502 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 FBXW4P57775 412 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 PPP2R5BQ15173 497 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 E2F5Q15329 346 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 KRT28Q7Z3Y7 464 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 OR8K1Q8NGG5 319 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 OR9Q1Q8NGQ5 310 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 TSC22D3Q99576 134 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 FGFR1OP2Q9NVK5 253 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 CHCHD3Q9NX63 227 aaKnown RBP8.57□□□□□ -1.04
BRCA1-221ENST00000493795 TLK1Q9UKI8 766 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 SYCE1LA8MT33 242 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 KCNJ18B7U540 433 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 PTPREP23469 700 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 KCNJ12Q14500 433 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 COG4Q9H9E3 785 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 PA2G4Q9UQ80 394 aaKnown RBP8.56□□□□□ -1.04
BRCA1-221ENST00000493795 KDRP35968 1356 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 SGK1O00141 431 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 TAB3Q8N5C8 712 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-221ENST00000493795 TCP11Q8WWU5 503 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 TRAIPQ9BWF2 469 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 KIF9Q9HAQ2 790 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 EIF6P56537 245 aaKnown RBP8.56□□□□□ -1.04
BRCA1-221ENST00000493795 SKOR1P84550 965 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 ACBD5Q5T8D3 534 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-221ENST00000493795 DDX42Q86XP3 938 aaKnown RBP eCLIP8.56□□□□□ -1.04
BRCA1-221ENST00000493795 TEX9Q8N6V9 391 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 RDH13Q8NBN7 331 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 ZCRB1Q8TBF4 217 aaKnown RBP8.56□□□□□ -1.04
BRCA1-221ENST00000493795 ZBTB18Q99592 522 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 ADPGKQ9BRR6 497 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 FIS1Q9Y3D6 152 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 SNX5Q9Y5X3 404 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 KDM2BQ8NHM5 1336 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 DAB2P98082 770 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 TMEM259Q4ZIN3 620 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 RYBPQ8N488 228 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-221ENST00000493795 LZICQ8WZA0 190 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 TTC25Q96NG3 672 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 LRRC37BQ96QE4 947 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 BLZF1Q9H2G9 400 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 ACTR5Q9H9F9 607 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-221ENST00000493795 SLC5A4Q9NY91 659 aa8.56□□□□□ -1.04
BRCA1-221ENST00000493795 FAM83GA6ND36 823 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 WASLO00401 505 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 HMGB3O15347 200 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 MRPL28Q13084 256 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 TPH2Q8IWU9 490 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 MYOCDQ8IZQ8 938 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 NUDCD1Q96RS6 583 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 FANCD2Q9BXW9 1451 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 NSFP46459 744 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 IFNAR2P48551 515 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 KIF22Q14807 665 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 FAM133BQ5BKY9 247 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 C17orf53Q8N3J3 647 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 CDC26Q8NHZ8 85 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 GLG1Q92896 1179 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 STX18Q9P2W9 335 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 WARS2Q9UGM6 360 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 GJA3Q9Y6H8 435 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 FOXO3O43524 673 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 TOM1L1O75674 476 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 ACTN1P12814 892 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 CHMLP26374 656 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 SLC1A4P43007 532 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 CARSP49589 748 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 ADKP55263 362 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 HDAC4P56524 1084 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 YWHAHQ04917 246 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 TMED2Q15363 201 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms