RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 LSG1Q9H089 658 aaKnown RBP8.18□□□□□ -1.1
TOP3A-207ENST00000493648 ANO2Q9NQ90 1003 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 PAK6Q9NQU5 681 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-207ENST00000493648 PNMA2Q9UL42 364 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 DIS3Q9Y2L1 958 aaKnown RBP8.18□□□□□ -1.1
TOP3A-207ENST00000493648 RIPK3Q9Y572 518 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 TNKSO95271 1327 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 FRMPD2Q68DX3 1309 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-207ENST00000493648 IFIT3O14879 490 aaKnown RBP8.17□□□□□ -1.1
TOP3A-207ENST00000493648 PGK2P07205 417 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 SNHG28P0DPA3 235 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 CNGA1P29973 690 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 CYP2C19P33261 490 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 ZNF543Q08ER8 600 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 ZNF792Q3KQV3 632 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 RNF20Q5VTR2 975 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 CCDC174Q6PII3 467 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 CYB5R4Q7L1T6 521 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 ENAHQ8N8S7 591 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-207ENST00000493648 MAML3Q96JK9 1138 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 AGBL1Q96MI9 1066 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 CRISPLD2Q9H0B8 497 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 HOMER2Q9NSB8 354 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 FLRT1Q9NZU1 646 aa8.17□□□□□ -1.1
TOP3A-207ENST00000493648 SLC27A2O14975 620 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 ZNF536O15090 1300 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 MSCO60682 206 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 ICAM1P05362 532 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 PARP1P09874 1014 aaKnown RBP8.16□□□□□ -1.1
TOP3A-207ENST00000493648 GOLGA8HP0CJ92 632 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 ALAS1P13196 640 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 CCND3P30281 292 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-207ENST00000493648 SNAP25P60880 206 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 WTAPQ15007 396 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 NECTIN1Q15223 517 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 SEC23AQ15436 765 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 ASPRV1Q53RT3 343 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 CREB3L3Q68CJ9 461 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.16□□□□□ -1.1
TOP3A-207ENST00000493648 TMTC2Q8N394 836 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 ANKLE1Q8NAG6 615 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 SHISA4Q96DD7 197 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 TINF2Q9BSI4 451 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 UBA5Q9GZZ9 404 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 RANBP17Q9H2T7 1088 aaKnown RBP8.16□□□□□ -1.1
TOP3A-207ENST00000493648 ACAD9Q9H845 621 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 RNF146Q9NTX7 359 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 NRBP1Q9UHY1 535 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 CCPG1Q9ULG6 757 aa8.16□□□□□ -1.1
TOP3A-207ENST00000493648 ZNF236Q9UL36 1845 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 DNAJC25-GNG10A0A024R161 153 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 POTEB2H3BUK9 544 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 DHX16O60231 1041 aaKnown RBP8.15□□□□□ -1.1
TOP3A-207ENST00000493648 FARP2O94887 1054 aaPredicted RBP8.15□□□□□ -1.1
TOP3A-207ENST00000493648 IGHA2P01877 340 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 MCM5P33992 734 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 TMEM67Q5HYA8 995 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 STOX1Q6ZVD7 989 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 RASGRP2Q7LDG7 609 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 CHST3Q7LGC8 479 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 NECAB2Q7Z6G3 386 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 CATIPQ7Z7H3 387 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 ZNF467Q7Z7K2 595 aaPredicted RBP8.15□□□□□ -1.1
TOP3A-207ENST00000493648 MSL3Q8N5Y2 521 aaKnown RBP8.15□□□□□ -1.1
TOP3A-207ENST00000493648 IGDCC4Q8TDY8 1250 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 MTA3Q9BTC8 594 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 HTATIP2Q9BUP3 242 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 VAT1LQ9HCJ6 419 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 DDX20Q9UHI6 824 aaKnown RBP8.15□□□□□ -1.1
TOP3A-207ENST00000493648 OGDHLQ9ULD0 1010 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 CNPY2Q9Y2B0 182 aa8.15□□□□□ -1.1
TOP3A-207ENST00000493648 PLXNA1Q9UIW2 1896 aa8.15□□□□□ -1.11
TOP3A-207ENST00000493648 PFASO15067 1338 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 SYNGAP1Q96PV0 1343 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 KLRF2D3W0D1 207 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 SEPT4O43236 478 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 PRC1O43663 620 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 CYBAP13498 195 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 KRT32Q14532 448 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 PRAMEF19Q5SWL8 479 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 LHX8Q68G74 356 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 MAMDC4Q6UXC1 1216 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 NFXL1Q6ZNB6 911 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 MB21D2Q8IYB1 491 aaPredicted RBP8.14□□□□□ -1.11
TOP3A-207ENST00000493648 ADGRF4Q8IZF3 695 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 DPF3Q92784 378 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 PAWRQ96IZ0 340 aaKnown RBP8.14□□□□□ -1.11
TOP3A-207ENST00000493648 TMEM87BQ96K49 555 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 TAF6LQ9Y6J9 622 aa8.14□□□□□ -1.11
TOP3A-207ENST00000493648 WDR19Q8NEZ3 1342 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 PALM3A6NDB9 673 aaPredicted RBP8.13□□□□□ -1.11
TOP3A-207ENST00000493648 CCDC69A6NI79 296 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 ASB14A6NK59 587 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 REC8O95072 547 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 ANTXR2P58335 489 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 CNTN2Q02246 1040 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 TRAF1Q13077 416 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 GRM4Q14833 912 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 CDC37Q16543 378 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms