RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ALG1Q9BT22 464 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 NUP62CLQ9H1M0 184 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 CD209Q9NNX6 404 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 A0A0G2JLW4 131 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 A0A1W2PQ27 194 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 A0A1W2PQ64 194 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 A0A1W2PQD8 194 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 SYCE3A1L190 88 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 CDC14CA4D256 554 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 DEXIO95424 95 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 SKIP12755 728 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 KIF5BP33176 963 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 SCNN1DP51172 638 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 GPSM2P81274 684 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 KRT76Q01546 638 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 DDR1Q08345 913 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 SF3A1Q15459 793 aaKnown RBP11.58□□□□□ -0.56
PRPF3-206ENST00000493553 MAP3K11Q16584 847 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
PRPF3-206ENST00000493553 MICU3Q86XE3 530 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 GAS2L3Q86XJ1 694 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 BICD2Q8TD16 824 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 MASTLQ96GX5 879 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 PPP1R9BQ96SB3 815 aa11.58□□□□□ -0.56
PRPF3-206ENST00000493553 RNF26Q9BY78 433 aaPredicted RBP11.58□□□□□ -0.56
PRPF3-206ENST00000493553 DCP1AQ9NPI6 582 aaPredicted RBP11.58□□□□□ -0.56
PRPF3-206ENST00000493553 CUEDC1Q9NWM3 386 aaPredicted RBP11.58□□□□□ -0.56
PRPF3-206ENST00000493553 COL1A1P02452 1464 aaPredicted RBP11.57□□□□□ -0.56
PRPF3-206ENST00000493553 USP17L12C9JPN9 530 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 USP17L21D6R901 530 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 FDPSP14324 419 aaKnown RBP11.57□□□□□ -0.56
PRPF3-206ENST00000493553 USP5P45974 858 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 GNAQP50148 359 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 EML3Q32P44 896 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 IFIT1BQ5T764 474 aaKnown RBP11.57□□□□□ -0.56
PRPF3-206ENST00000493553 STYK1Q6J9G0 422 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 ZNF654Q8IZM8 581 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 FANCBQ8NB91 859 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 TBC1D16Q8TBP0 767 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 COL25A1Q9BXS0 654 aaPredicted RBP11.57□□□□□ -0.56
PRPF3-206ENST00000493553 ZC3H12CQ9C0D7 883 aaKnown RBP11.57□□□□□ -0.56
PRPF3-206ENST00000493553 BRMS1Q9HCU9 246 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
PRPF3-206ENST00000493553 MROH7-TTC4A0A0A0MT08 1334 aa11.57□□□□□ -0.56
PRPF3-206ENST00000493553 GPR75-ASB3A0A0A6YYF3 556 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 RANBP6O60518 1105 aaKnown RBP11.56□□□□□ -0.56
PRPF3-206ENST00000493553 BMP15O95972 392 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 INHAP05111 366 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 SRGNP10124 158 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 PRDX5P30044 214 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 GDF10P55107 478 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 STK38Q15208 465 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 SEC23AQ15436 765 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 ADGRA1Q86SQ6 560 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 DGKHQ86XP1 1220 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 CTCFLQ8NI51 663 aaPredicted RBP11.56□□□□□ -0.56
PRPF3-206ENST00000493553 SDR42E1Q8WUS8 393 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 LZTS2Q9BRK4 669 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 FOXP1Q9H334 677 aaPredicted RBP11.56□□□□□ -0.56
PRPF3-206ENST00000493553 TIMMDC1Q9NPL8 285 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 TCP11L1Q9NUJ3 509 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 MCM9Q9NXL9 1143 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 AATFQ9NY61 560 aaKnown RBP eCLIP11.56□□□□□ -0.56
PRPF3-206ENST00000493553 TFIP11Q9UBB9 837 aaKnown RBP11.56□□□□□ -0.56
PRPF3-206ENST00000493553 CEP131Q9UPN4 1083 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 A0A1B0GUL6 1792 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 TNKSO95271 1327 aa11.56□□□□□ -0.56
PRPF3-206ENST00000493553 ROBO3Q96MS0 1386 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 MAST2Q6P0Q8 1798 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 KINO60870 393 aaKnown RBP11.55□□□□□ -0.56
PRPF3-206ENST00000493553 STAU1O95793 577 aaKnown RBP11.55□□□□□ -0.56
PRPF3-206ENST00000493553 U2AF2P26368 475 aaKnown RBP eCLIP11.55□□□□□ -0.56
PRPF3-206ENST00000493553 KLRK1P26718 216 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 ME1P48163 572 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 DYNLL1P63167 89 aaKnown RBP11.55□□□□□ -0.56
PRPF3-206ENST00000493553 KIF23Q02241 960 aaPredicted RBP11.55□□□□□ -0.56
PRPF3-206ENST00000493553 NTRK3Q16288 839 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 GNASQ5JWF2 1037 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 C12orf60Q5U649 245 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 ADALQ6DHV7 355 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 DPP8Q6V1X1 898 aaPredicted RBP11.55□□□□□ -0.56
PRPF3-206ENST00000493553 COL23A1Q86Y22 540 aaPredicted RBP11.55□□□□□ -0.56
PRPF3-206ENST00000493553 CRACR2BQ8N4Y2 399 aaPredicted RBP11.55□□□□□ -0.56
PRPF3-206ENST00000493553 SUPT20HQ8NEM7 779 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 ANKS1AQ92625 1134 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 CCDC34Q96HJ3 373 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 MRIQ9BWK5 157 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 TNMDQ9H2S6 317 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 CLSTN2Q9H4D0 955 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 STK32BQ9NY57 414 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 MORC2Q9Y6X9 1032 aaPredicted RBP11.55□□□□□ -0.56
PRPF3-206ENST00000493553 CACNA1SQ13698 1873 aa11.55□□□□□ -0.56
PRPF3-206ENST00000493553 FAM181BA6NEQ2 426 aa11.54□□□□□ -0.56
PRPF3-206ENST00000493553 H0YIN7 160 aa11.54□□□□□ -0.56
PRPF3-206ENST00000493553 FKBP1AP62942 108 aaKnown RBP11.54□□□□□ -0.56
PRPF3-206ENST00000493553 FAM160A1Q05DH4 1040 aa11.54□□□□□ -0.56
PRPF3-206ENST00000493553 TLR1Q15399 786 aa11.54□□□□□ -0.56
PRPF3-206ENST00000493553 RILPL1Q5EBL4 403 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms