RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 INTS4Q96HW7 963 aaKnown RBP10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 CHAMP1Q96JM3 812 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 ZSCAN31Q96LW9 406 aaPredicted RBP10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 AIFM3Q96NN9 605 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 CPVLQ9H3G5 476 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 CABP5Q9NP86 173 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 GJB4Q9NTQ9 266 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 FBXO28Q9NVF7 368 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 FLRT1Q9NZU1 646 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 MAD2L2Q9UI95 211 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 MYH6P13533 1939 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 CDH23Q9H251 3354 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 COL6A3P12111 3177 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 SLC3A2P08195 630 aaKnown RBP10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 TSPY3P0CV98 308 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 TSPY8P0CW00 308 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 XRCC5P13010 732 aaKnown RBP10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 GRB14Q14449 540 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 GRM4Q14833 912 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 ANKRD1Q15327 319 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 PKN1Q16512 942 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 SPICE1Q8N0Z3 855 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 LRRC47Q8N1G4 583 aaKnown RBP10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 FANCBQ8NB91 859 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 LPAR1Q92633 364 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 FEZ1Q99689 392 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 KANSL2Q9H9L4 492 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 SH2B1Q9NRF2 756 aaPredicted RBP10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 NYAP2Q9P242 653 aa10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 ZNF214Q9UL59 606 aaPredicted RBP10.57□□□□□ -0.72
TM4SF1-203ENST00000493298 GOLGA8BA8MQT2 603 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 MPHOSPH10O00566 681 aaKnown RBP10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 WDR46O15213 610 aaKnown RBP10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 HOXC6P09630 235 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 DSG3P32926 999 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 COG2Q14746 738 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 TMEM132BQ14DG7 1078 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 IFIT1BQ5T764 474 aaKnown RBP10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 TTBK2Q6IQ55 1244 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 MICU3Q86XE3 530 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 U2AF1L4Q8WU68 220 aaKnown RBP10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 GTF3C2Q8WUA4 911 aaPredicted RBP10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 COA7Q96BR5 231 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 CHMP4CQ96CF2 233 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 ATG4CQ96DT6 458 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 PAGR1Q9BTK6 254 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 MOV10L1Q9BXT6 1211 aaKnown RBP10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 CLIP2Q9UDT6 1046 aa10.56□□□□□ -0.72
TM4SF1-203ENST00000493298 BAZ2BQ9UIF8 2168 aaKnown RBP10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 ZBTB43O43298 467 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 SGPL1O95470 568 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 HMGCRP04035 888 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 GOLGA8HP0CJ92 632 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 PDHBP11177 359 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 MAPK4P31152 587 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 NT5C2P49902 561 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 RCAN1P53805 252 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 BECN1Q14457 450 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 NPY5RQ15761 445 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 LHX8Q68G74 356 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 TMTC3Q6ZXV5 915 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 PLEKHH3Q7Z736 793 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 NPLOC4Q8TAT6 608 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 PHKBQ93100 1093 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 NUP88Q99567 741 aaPredicted RBP10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 UBAC1Q9BSL1 405 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 SPATC1LQ9H0A9 340 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 RNF208Q9H0X6 261 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 SLKQ9H2G2 1235 aaPredicted RBP10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 SLC12A7Q9Y666 1083 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 LTBP2Q14767 1821 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 CNTNAP5Q8WYK1 1306 aa10.55□□□□□ -0.72
TM4SF1-203ENST00000493298 hCG_1642624A0A1W2PR95 340 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 PTPDC1A2A3K4 754 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 COBLO75128 1261 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 DDAH1O94760 285 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 TTLL1O95922 423 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 NDUFB10O96000 172 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 IFNAR1P17181 557 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 PTPREP23469 700 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 GJB2P29033 226 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 CACNB2Q08289 660 aaPredicted RBP10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 PRPF38BQ5VTL8 546 aaKnown RBP10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 TYW1BQ6NUM6 668 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 IQCA1Q86XH1 822 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 AMOTL1Q8IY63 956 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 TMTC2Q8N394 836 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 SHCBP1Q8NEM2 672 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 TRPV1Q8NER1 839 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 SOCS4Q8WXH5 440 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 DDX11Q96FC9 970 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 MAP3K14Q99558 947 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 ARHGEF10LQ9HCE6 1279 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 PPP1R9AQ9ULJ8 1098 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 SYNPO2Q9UMS6 1093 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 STX8Q9UNK0 236 aa10.54□□□□□ -0.72
TM4SF1-203ENST00000493298 MTMR6Q9Y217 621 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms