RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 MCM3APO60318 1980 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
SAMM50-204ENST00000493161 M0R2C6 588 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 ARVCFO00192 962 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 GJA9P57773 515 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 BEX3Q00994 111 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 GNASQ5JWF2 1037 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 RASIP1Q5U651 963 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.37■□□□□ 0.21
SAMM50-204ENST00000493161 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 PIAS4Q8N2W9 510 aaPredicted RBP16.37■□□□□ 0.21
SAMM50-204ENST00000493161 MKL1Q969V6 931 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 PBX4Q9BYU1 374 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 ABHD16BQ9H3Z7 469 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 HOMER2Q9NSB8 354 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 ECHDC1Q9NTX5 307 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 MTMR4Q9NYA4 1195 aa16.37■□□□□ 0.21
SAMM50-204ENST00000493161 A0A0U1RQG5 324 aaPredicted RBP16.36■□□□□ 0.21
SAMM50-204ENST00000493161 PPIGQ13427 754 aaKnown RBP eCLIP16.36■□□□□ 0.21
SAMM50-204ENST00000493161 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
SAMM50-204ENST00000493161 ZNF365Q70YC5 407 aa16.36■□□□□ 0.21
SAMM50-204ENST00000493161 FAM126BQ8IXS8 530 aa16.36■□□□□ 0.21
SAMM50-204ENST00000493161 KBTBD3Q8NAB2 608 aa16.36■□□□□ 0.21
SAMM50-204ENST00000493161 PCSK9Q8NBP7 692 aaKnown RBP16.36■□□□□ 0.21
SAMM50-204ENST00000493161 PPM1EQ8WY54 764 aa16.36■□□□□ 0.21
SAMM50-204ENST00000493161 APPBP2Q92624 585 aa16.36■□□□□ 0.21
SAMM50-204ENST00000493161 FEM1BQ9UK73 627 aa16.36■□□□□ 0.21
SAMM50-204ENST00000493161 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
SAMM50-204ENST00000493161 MYH4Q9Y623 1939 aa16.36■□□□□ 0.21
SAMM50-204ENST00000493161 ASTN1O14525 1302 aa16.36■□□□□ 0.21
SAMM50-204ENST00000493161 RNF113AO15541 343 aaKnown RBP16.35■□□□□ 0.21
SAMM50-204ENST00000493161 GPAA1O43292 621 aa16.35■□□□□ 0.21
SAMM50-204ENST00000493161 CYP2C18P33260 490 aa16.35■□□□□ 0.21
SAMM50-204ENST00000493161 ZNF444Q8N0Y2 327 aaPredicted RBP16.35■□□□□ 0.21
SAMM50-204ENST00000493161 CHST13Q8NET6 341 aa16.35■□□□□ 0.21
SAMM50-204ENST00000493161 PRDM12Q9H4Q4 367 aa16.35■□□□□ 0.21
SAMM50-204ENST00000493161 CXXC1Q9P0U4 656 aaPredicted RBP16.35■□□□□ 0.21
SAMM50-204ENST00000493161 UMODL1Q5DID0 1318 aa16.35■□□□□ 0.21
SAMM50-204ENST00000493161 CHD9Q3L8U1 2897 aa16.35■□□□□ 0.21
SAMM50-204ENST00000493161 SOWAHBA6NEL2 793 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 CD4P01730 458 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 APPP05067 770 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 TDO2P48775 406 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 TMEM63BQ5T3F8 832 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 CCDC129Q6ZRS4 1044 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 TMEM199Q8N511 208 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 FAM133AQ8N9E0 248 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 GMCL1P1Q8NEA9 526 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 AGBL1Q96MI9 1066 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 SEC62Q99442 399 aaKnown RBP16.34■□□□□ 0.21
SAMM50-204ENST00000493161 FBXO40Q9UH90 709 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 ZNF536O15090 1300 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 MROH7Q68CQ1 1323 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 MUC3AQ02505 3323 aa16.34■□□□□ 0.21
SAMM50-204ENST00000493161 TMEM232C9JQI7 657 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 TTLL1O95922 423 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 BMP3P12645 472 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 SNAP25P60880 206 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 ADGRE1Q14246 886 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 TJAP1Q5JTD0 557 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 CXCL17Q6UXB2 119 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 IFNL3Q8IZI9 196 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 SYMPKQ92797 1274 aaKnown RBP16.33■□□□□ 0.2
SAMM50-204ENST00000493161 SPC25Q9HBM1 224 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 A1CFQ9NQ94 594 aaKnown RBP16.33■□□□□ 0.2
SAMM50-204ENST00000493161 GRIN2DO15399 1336 aa16.33■□□□□ 0.2
SAMM50-204ENST00000493161 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
SAMM50-204ENST00000493161 OAZ1P54368 228 aa16.32■□□□□ 0.2
SAMM50-204ENST00000493161 NKX3-2P78367 333 aa16.32■□□□□ 0.2
SAMM50-204ENST00000493161 TNFAIP2Q03169 654 aa16.32■□□□□ 0.2
SAMM50-204ENST00000493161 NOL8Q76FK4 1167 aaKnown RBP16.32■□□□□ 0.2
SAMM50-204ENST00000493161 RASGRP2Q7LDG7 609 aa16.32■□□□□ 0.2
SAMM50-204ENST00000493161 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
SAMM50-204ENST00000493161 ACAD9Q9H845 621 aa16.32■□□□□ 0.2
SAMM50-204ENST00000493161 PDGFCQ9NRA1 345 aa16.32■□□□□ 0.2
SAMM50-204ENST00000493161 RNF146Q9NTX7 359 aa16.32■□□□□ 0.2
SAMM50-204ENST00000493161 ISY1Q9ULR0 285 aaKnown RBP16.32■□□□□ 0.2
SAMM50-204ENST00000493161 GNEQ9Y223 722 aaKnown RBP16.32■□□□□ 0.2
SAMM50-204ENST00000493161 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
SAMM50-204ENST00000493161 TSPY3P0CV98 308 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 TSPY8P0CW00 308 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 SMPD1P17405 629 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 TFAP4Q01664 338 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 CCDC85BQ15834 202 aaPredicted RBP16.31■□□□□ 0.2
SAMM50-204ENST00000493161 SLC43A3Q8NBI5 491 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 PURBQ96QR8 312 aaKnown RBP16.31■□□□□ 0.2
SAMM50-204ENST00000493161 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 NKX2-4Q9H2Z4 354 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 IL23AQ9NPF7 189 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 INCENPQ9NQS7 918 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 YBX2Q9Y2T7 364 aaKnown RBP16.31■□□□□ 0.2
SAMM50-204ENST00000493161 TTC28Q96AY4 2481 aa16.31■□□□□ 0.2
SAMM50-204ENST00000493161 PLIN4Q96Q06 1357 aa16.3■□□□□ 0.2
SAMM50-204ENST00000493161 GNAT2P19087 354 aa16.3■□□□□ 0.2
SAMM50-204ENST00000493161 MCCP23508 829 aa16.3■□□□□ 0.2
SAMM50-204ENST00000493161 CCL23P55773 120 aa16.3■□□□□ 0.2
SAMM50-204ENST00000493161 PSMC6P62333 389 aa16.3■□□□□ 0.2
SAMM50-204ENST00000493161 ITGA7Q13683 1181 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms