RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 EPOPA6NHQ4 379 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 CA3P07451 260 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 ITGA7Q13683 1181 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 NOL8Q76FK4 1167 aaKnown RBP14.54□□□□□ -0.08
GPNMB-214ENST00000492858 ARMCX2Q7L311 632 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 LCORLQ8N3X6 602 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 HLA-CQ95604 372 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 CLUAP1Q96AJ1 413 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 SCLYQ96I15 445 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 SLF1Q9BQI6 1058 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 TRPV6Q9H1D0 765 aa14.54□□□□□ -0.08
GPNMB-214ENST00000492858 ZNF532Q9HCE3 1301 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 CYP2D7A0A087X1C5 515 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 SMIM22K7EJ46 135 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 IPO8O15397 1037 aaKnown RBP14.53□□□□□ -0.08
GPNMB-214ENST00000492858 CDK8P49336 464 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 ATP8B2P98198 1209 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 CPXCR1Q8N123 301 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 ANKRD35Q8N283 1001 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 VWCEQ96DN2 955 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 FGD4Q96M96 766 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 NUP88Q99567 741 aaPredicted RBP14.53□□□□□ -0.08
GPNMB-214ENST00000492858 KANSL2Q9H9L4 492 aa14.53□□□□□ -0.08
GPNMB-214ENST00000492858 NOP58Q9Y2X3 529 aaKnown RBP14.53□□□□□ -0.08
GPNMB-214ENST00000492858 LRRC37A2A6NM11 1700 aa14.52□□□□□ -0.08
GPNMB-214ENST00000492858 ASTN1O14525 1302 aa14.52□□□□□ -0.08
GPNMB-214ENST00000492858 GRIN2DO15399 1336 aa14.52□□□□□ -0.08
GPNMB-214ENST00000492858 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-214ENST00000492858 B4GALT4O60513 344 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 CABYRO75952 493 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 NKX3-2P78367 333 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 TNFAIP2Q03169 654 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 TTLL4Q14679 1199 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 TTF1Q15361 905 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-214ENST00000492858 CCDC144CPQ8IYA2 1237 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 ARNTL2Q8WYA1 636 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 FRAT1Q92837 279 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-214ENST00000492858 KATNBL1Q9H079 304 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 C1orf115Q9H7X2 142 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 ARMT1Q9H993 441 aa14.52□□□□□ -0.09
GPNMB-214ENST00000492858 TCRBV5S4A2TA0A5A2 114 aa14.51□□□□□ -0.09
GPNMB-214ENST00000492858 PI4K2BG5E9Z4 385 aa14.51□□□□□ -0.09
GPNMB-214ENST00000492858 PRKAB2O43741 272 aa14.51□□□□□ -0.09
GPNMB-214ENST00000492858 FSCN1Q16658 493 aaKnown RBP14.51□□□□□ -0.09
GPNMB-214ENST00000492858 C16orf86Q6ZW13 317 aa14.51□□□□□ -0.09
GPNMB-214ENST00000492858 TLK2Q86UE8 772 aa14.51□□□□□ -0.09
GPNMB-214ENST00000492858 AACSQ86V21 672 aa14.51□□□□□ -0.09
GPNMB-214ENST00000492858 CTDP1Q9Y5B0 961 aaPredicted RBP14.51□□□□□ -0.09
GPNMB-214ENST00000492858 ATP2A1O14983 1001 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 ZBED4O75132 1171 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 PTGS1P23219 599 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 C12orf60Q5U649 245 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.5□□□□□ -0.09
GPNMB-214ENST00000492858 DEFB128Q7Z7B8 93 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 AMOTL1Q8IY63 956 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 TMEM57Q8N5G2 664 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 PRPF38AQ8NAV1 312 aaKnown RBP14.5□□□□□ -0.09
GPNMB-214ENST00000492858 AGBL1Q96MI9 1066 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 RAVER2Q9HCJ3 691 aaKnown RBP14.5□□□□□ -0.09
GPNMB-214ENST00000492858 CD320Q9NPF0 282 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 ATP8A2Q9NTI2 1148 aa14.5□□□□□ -0.09
GPNMB-214ENST00000492858 USP17L12C9JPN9 530 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 USP17L21D6R901 530 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 GOLIM4O00461 696 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 ZEB2O60315 1214 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 ARHGEF15O94989 841 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 MBD4O95243 580 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 PFKMP08237 780 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 MRE11P49959 708 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 PSMC6P62333 389 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 CNTN2Q02246 1040 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 TAP1Q03518 808 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 KIFC2Q96AC6 838 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 DNAJC2Q99543 621 aaKnown RBP14.49□□□□□ -0.09
GPNMB-214ENST00000492858 SEZ6LQ9BYH1 1024 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 AP5M1Q9H0R1 490 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 FBXO40Q9UH90 709 aa14.49□□□□□ -0.09
GPNMB-214ENST00000492858 GNEQ9Y223 722 aaKnown RBP14.49□□□□□ -0.09
GPNMB-214ENST00000492858 PRR33A8MZF0 331 aa14.48□□□□□ -0.09
GPNMB-214ENST00000492858 DYNC1LI2O43237 492 aaPredicted RBP14.48□□□□□ -0.09
GPNMB-214ENST00000492858 NDUFB10O96000 172 aa14.48□□□□□ -0.09
GPNMB-214ENST00000492858 GRB10Q13322 594 aa14.48□□□□□ -0.09
GPNMB-214ENST00000492858 SLFNL1Q499Z3 407 aa14.48□□□□□ -0.09
GPNMB-214ENST00000492858 CHST13Q8NET6 341 aa14.48□□□□□ -0.09
GPNMB-214ENST00000492858 UIMC1Q96RL1 719 aa14.48□□□□□ -0.09
GPNMB-214ENST00000492858 SLC9A7Q96T83 725 aa14.48□□□□□ -0.09
GPNMB-214ENST00000492858 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.48□□□□□ -0.09
GPNMB-214ENST00000492858 ALDH8A1Q9H2A2 487 aaPredicted RBP14.48□□□□□ -0.09
GPNMB-214ENST00000492858 HOMER2Q9NSB8 354 aa14.48□□□□□ -0.09
GPNMB-214ENST00000492858 MYH8P13535 1937 aa14.48□□□□□ -0.09
GPNMB-214ENST00000492858 F5H6K3 240 aa14.47□□□□□ -0.09
GPNMB-214ENST00000492858 CYP2C9P11712 490 aa14.47□□□□□ -0.09
GPNMB-214ENST00000492858 ACTN1P12814 892 aa14.47□□□□□ -0.09
GPNMB-214ENST00000492858 KLRC3Q07444 240 aa14.47□□□□□ -0.09
GPNMB-214ENST00000492858 DDRGK1Q96HY6 314 aa14.47□□□□□ -0.09
GPNMB-214ENST00000492858 SLC38A10Q9HBR0 1119 aa14.47□□□□□ -0.09
GPNMB-214ENST00000492858 TRMT13Q9NUP7 481 aaKnown RBP14.47□□□□□ -0.09
GPNMB-214ENST00000492858 MCM3APO60318 1980 aa14.47□□□□□ -0.09
GPNMB-214ENST00000492858 KIF28PB7ZC32 967 aa14.46□□□□□ -0.09
GPNMB-214ENST00000492858 SMPD1P17405 629 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms