RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 MECOMQ03112 1051 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 DLX2Q07687 328 aaPredicted RBP6.67□□□□□ -1.34
SEC13-219ENST00000492602 ACVR2BQ13705 512 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 SPTY2D1Q68D10 685 aaPredicted RBP6.67□□□□□ -1.34
SEC13-219ENST00000492602 ERICH6Q7L0X2 663 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 MB21D1Q8N884 522 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 KAZALD1Q96I82 304 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 RAD9AQ99638 391 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 NSUN3Q9H649 340 aaKnown RBP6.67□□□□□ -1.34
SEC13-219ENST00000492602 GRIN2DO15399 1336 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 FAM208BQ5VWN6 2430 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 CTAGE5O15320 804 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 GJB5O95377 273 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 SLC25A27O95847 323 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 LDHCP07864 332 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 IQCF3P0C7M6 154 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 SUPT20HL2P0C7V6 817 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 WDR5P61964 334 aaKnown RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 PSMC6P62333 389 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 DEFB103AP81534 67 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 CALD1Q05682 793 aaKnown RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 SMAD4Q13485 552 aaKnown RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 COL19A1Q14993 1142 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 RSPO4Q2I0M5 234 aaPredicted RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 CCDC144BQ3MJ40 725 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 FAM117BQ6P1L5 589 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 NOL8Q76FK4 1167 aaKnown RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 METTL16Q86W50 562 aaKnown RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 MAPKAPK5Q8IW41 473 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 MSL3Q8N5Y2 521 aaKnown RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 TMEM105Q8N8V8 129 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 RETREG2Q8NC44 543 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 SH3RF3Q8TEJ3 882 aaPredicted RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 ZNF384Q8TF68 577 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 ATG4CQ96DT6 458 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 RIPOR3Q96MK2 946 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 HINFPQ9BQA5 517 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 SEZ6LQ9BYH1 1024 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 ALDH8A1Q9H2A2 487 aaPredicted RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 BICC1Q9H694 974 aaKnown RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 TRMT13Q9NUP7 481 aaKnown RBP6.66□□□□□ -1.34
SEC13-219ENST00000492602 PALD1Q9ULE6 856 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 SPTBN2O15020 2390 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 GPR179Q6PRD1 2367 aa6.66□□□□□ -1.34
SEC13-219ENST00000492602 LOC730098B7Z3J9 87 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 NCK2O43639 380 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 FLOT1O75955 427 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 HLA-DOAP06340 250 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 GSTO1P78417 241 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 GPM6BQ13491 265 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 TMEM132BQ14DG7 1078 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 ATP2B3Q16720 1220 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 TWISTNBQ3B726 338 aaPredicted RBP6.65□□□□□ -1.34
SEC13-219ENST00000492602 TGFBRAP1Q8WUH2 860 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 ABHD16BQ9H3Z7 469 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.65□□□□□ -1.34
SEC13-219ENST00000492602 CD207Q9UJ71 328 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 USP24Q9UPU5 2620 aa6.65□□□□□ -1.34
SEC13-219ENST00000492602 TNKSO95271 1327 aa6.65□□□□□ -1.35
SEC13-219ENST00000492602 SCN5AQ14524 2016 aa6.65□□□□□ -1.35
SEC13-219ENST00000492602 CEP250Q9BV73 2442 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 EYA2O00167 538 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 ZEB2O60315 1214 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 LMNAP02545 664 aaKnown RBP6.64□□□□□ -1.35
SEC13-219ENST00000492602 NBPF7P0C2Y1 421 aaPredicted RBP6.64□□□□□ -1.35
SEC13-219ENST00000492602 RASGRF1Q13972 1273 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 FSCN1Q16658 493 aaKnown RBP6.64□□□□□ -1.35
SEC13-219ENST00000492602 ABCB5Q2M3G0 1257 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 CTC1Q2NKJ3 1217 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 RABL6Q3YEC7 729 aaPredicted RBP6.64□□□□□ -1.35
SEC13-219ENST00000492602 EPC2Q52LR7 807 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 KIAA0319Q5VV43 1072 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 CCDC102BQ68D86 513 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 MAMDC4Q6UXC1 1216 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 ATF7IPQ6VMQ6 1270 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 ZBTB33Q86T24 672 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 TSR2Q969E8 191 aaKnown RBP6.64□□□□□ -1.35
SEC13-219ENST00000492602 NSUN4Q96CB9 384 aaKnown RBP6.64□□□□□ -1.35
SEC13-219ENST00000492602 DDX11Q96FC9 970 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 RPGRIP1Q96KN7 1286 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 NOL10Q9BSC4 688 aaKnown RBP6.64□□□□□ -1.35
SEC13-219ENST00000492602 IGFLR1Q9H665 355 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 CABP5Q9NP86 173 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 SAP30BPQ9UHR5 308 aaKnown RBP6.64□□□□□ -1.35
SEC13-219ENST00000492602 PCDHGC5Q9Y5F6 944 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 ZNF292O60281 2723 aa6.64□□□□□ -1.35
SEC13-219ENST00000492602 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.63□□□□□ -1.35
SEC13-219ENST00000492602 H3BNC9 293 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 ASTN1O14525 1302 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 SIPA1L1O43166 1804 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 TBX10O75333 385 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 FLT1P17948 1338 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 ICAM3P32942 547 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 STAT3P40763 770 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 NKX3-2P78367 333 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 TNFAIP2Q03169 654 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 HYAL1Q12794 435 aa6.63□□□□□ -1.35
SEC13-219ENST00000492602 COL9A3Q14050 684 aaPredicted RBP6.63□□□□□ -1.35
SEC13-219ENST00000492602 CBX2Q14781 532 aaPredicted RBP6.63□□□□□ -1.35
SEC13-219ENST00000492602 PTPN21Q16825 1174 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms