RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 ALDH3A1P30838 453 aa23.3■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 TECP42680 631 aa23.3■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 DENND2CQ68D51 928 aa23.3■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 PRDM4Q9UKN5 801 aa23.3■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 SPOPO43791 374 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 MYL1P05976 194 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 ZBTB16Q05516 673 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 ICE2Q659A1 982 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 L2HGDHQ9H9P8 463 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 DCAF8L1A6NGE4 600 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 TEX11Q8IYF3 940 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 GPKOWQ92917 476 aaPredicted RBP eCLIP23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 KRT12Q99456 494 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 GPCPD1Q9NPB8 672 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 AMFRQ9UKV5 643 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 ABCC12Q96J65 1359 aa23.29■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 HEXIM1O94992 359 aaKnown RBP23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 RNF14Q9UBS8 474 aa23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 USP31Q70CQ4 1352 aa23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 MB21D1Q8N884 522 aa23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 TPTE2Q6XPS3 522 aa23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 TADA2BQ86TJ2 420 aa23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 EPB41L5Q9HCM4 733 aa23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 PRPF3O43395 683 aaKnown RBP23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 ADGRB1O14514 1584 aa23.28■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 IFT88Q13099 833 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 PNMA1Q8ND90 353 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 ENGASEQ8NFI3 743 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 LAD1O00515 517 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 RGS16O15492 202 aaPredicted RBP23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 SLC8A1P32418 973 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 POLR2FP61218 127 aaKnown RBP23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 EHHADHQ08426 723 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 IQCGQ9H095 443 aaKnown RBP23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 NNTQ13423 1086 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 NT5C3AQ9H0P0 336 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 ADAMTS2O95450 1211 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 PRR29P0C7W0 189 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 PPP2R5EQ16537 467 aa23.27■■□□□ 1.32
CHKB-CPT1B-203ENST00000492556 TEX33O43247 280 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 EMBQ6PCB8 327 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 NEK8Q86SG6 692 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 TBC1D10CQ8IV04 446 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 MMS22LQ6ZRQ5 1243 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 METTL16Q86W50 562 aaKnown RBP23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 TAF6LQ9Y6J9 622 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 NEXMIFQ5QGS0 1516 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ANKRD65E5RJM6 399 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 EEF2P13639 858 aaKnown RBP23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 SNCBQ16143 134 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 GLT8D2Q9H1C3 349 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 HOMER2Q9NSB8 354 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CTTNBP2NLQ9P2B4 639 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ZNF609O15014 1411 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CYP27A1Q02318 531 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CYB5R4Q7L1T6 521 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PIH1D3Q9NQM4 214 aaKnown RBP23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PARP3Q9Y6F1 533 aa23.26■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 MAP3K15Q6ZN16 1313 aa23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PPP4R3AQ6IN85 833 aa23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CERS3Q8IU89 383 aa23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 BIN2Q9UBW5 565 aaPredicted RBP23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 TUBE1Q9UJT0 475 aa23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PARP2Q9UGN5 583 aa23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PALLDQ8WX93 1383 aa23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PRKAB2O43741 272 aa23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 MOCS3O95396 460 aa23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 GJC1P36383 396 aa23.25■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 USP32Q8NFA0 1604 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CCNE1P24864 410 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ST5P78524 1137 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CXCR5P32302 372 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 MCTP2Q6DN12 878 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 AK8Q96MA6 479 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 STRBPQ96SI9 672 aaKnown RBP23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PCDHA4Q9UN74 947 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CAMSAP1Q5T5Y3 1602 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 F8W031 263 aaPredicted RBP23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ZBTB22O15209 634 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 RFC4P35249 363 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 SF3A3Q12874 501 aaKnown RBP eCLIP23.24■■□□□ 1.314e-7■■■■■ 32.9
CHKB-CPT1B-203ENST00000492556 MTF1Q14872 753 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 MAN2A1Q16706 1144 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 SRLQ86TD4 932 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 KAT6BQ8WYB5 2073 aa23.24■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 FOXN1O15353 648 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 LMNTD2Q8IXW0 634 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 WDR66Q8TBY9 1149 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 U2AF1L4Q8WU68 220 aaKnown RBP23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 BICD1Q96G01 975 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ANO9A1A5B4 782 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 H2AFXP16104 143 aaPredicted RBP23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 GBP1P32455 592 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CNKSR2Q8WXI2 1034 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 HDAC9Q9UKV0 1011 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PCDHA13Q9Y5I0 950 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CDC27P30260 824 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 GGCXP38435 758 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms