RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 PDHBP11177 359 aa27.82■■■□□ 2.04
CTDSP1-211ENST00000492545 C7orf61Q8IZ16 206 aa27.82■■■□□ 2.04
CTDSP1-211ENST00000492545 ANKS1AQ92625 1134 aa27.82■■■□□ 2.04
CTDSP1-211ENST00000492545 CHMP4CQ96CF2 233 aa27.82■■■□□ 2.04
CTDSP1-211ENST00000492545 AGBL1Q96MI9 1066 aa27.82■■■□□ 2.04
CTDSP1-211ENST00000492545 SENP6Q9GZR1 1112 aaPredicted RBP27.82■■■□□ 2.04
CTDSP1-211ENST00000492545 RNF146Q9NTX7 359 aa27.82■■■□□ 2.04
CTDSP1-211ENST00000492545 KBTBD13C9JR72 458 aa27.81■■■□□ 2.04
CTDSP1-211ENST00000492545 ZNF865P0CJ78 1059 aaPredicted RBP27.81■■■□□ 2.04
CTDSP1-211ENST00000492545 SNHG28P0DPA3 235 aa27.81■■■□□ 2.04
CTDSP1-211ENST00000492545 AKR1A1P14550 325 aa27.81■■■□□ 2.04
CTDSP1-211ENST00000492545 SYDE2Q5VT97 1194 aa27.81■■■□□ 2.04
CTDSP1-211ENST00000492545 TRERF1Q96PN7 1200 aa27.81■■■□□ 2.04
CTDSP1-211ENST00000492545 RANBP17Q9H2T7 1088 aaKnown RBP27.81■■■□□ 2.04
CTDSP1-211ENST00000492545 HOMER2Q9NSB8 354 aa27.81■■■□□ 2.04
CTDSP1-211ENST00000492545 KDM4AO75164 1064 aa27.8■■■□□ 2.04
CTDSP1-211ENST00000492545 ICAM1P05362 532 aa27.8■■■□□ 2.04
CTDSP1-211ENST00000492545 CHMLP26374 656 aa27.8■■■□□ 2.04
CTDSP1-211ENST00000492545 GPATCH4Q5T3I0 446 aaKnown RBP27.8■■■□□ 2.04
CTDSP1-211ENST00000492545 PRO3102Q9H379 93 aa27.8■■■□□ 2.04
CTDSP1-211ENST00000492545 SNAI1O95863 264 aaPredicted RBP27.79■■■□□ 2.04
CTDSP1-211ENST00000492545 ALAS1P13196 640 aa27.79■■■□□ 2.04
CTDSP1-211ENST00000492545 ZNF543Q08ER8 600 aa27.79■■■□□ 2.04
CTDSP1-211ENST00000492545 GJC2Q5T442 439 aaPredicted RBP27.79■■■□□ 2.04
CTDSP1-211ENST00000492545 CCDC174Q6PII3 467 aa27.79■■■□□ 2.04
CTDSP1-211ENST00000492545 ABHD16BQ9H3Z7 469 aa27.79■■■□□ 2.04
CTDSP1-211ENST00000492545 FAM184BQ9ULE4 1060 aa27.79■■■□□ 2.04
CTDSP1-211ENST00000492545 CCPG1Q9ULG6 757 aa27.79■■■□□ 2.04
CTDSP1-211ENST00000492545 TRIOBPQ9H2D6 2365 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 A0A1W2PPC1 479 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 POTEB2H3BUK9 544 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 LRRC26Q2I0M4 334 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 ANO1Q5XXA6 986 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 TTBK2Q6IQ55 1244 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 RNF180Q86T96 592 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 FAM133AQ8N9E0 248 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 ZSCAN10Q96SZ4 725 aaPredicted RBP27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 A1CFQ9NQ94 594 aaKnown RBP27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 XPNPEP3Q9NQH7 507 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 ZSWIM5Q9P217 1185 aa27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 RBM27Q9P2N5 1060 aaKnown RBP27.78■■■□□ 2.04
CTDSP1-211ENST00000492545 RANBP2P49792 3224 aaKnown RBP27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 B4E1Z4 1266 aa27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 TAL1P17542 331 aaPredicted RBP27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 SLC16A2P36021 539 aa27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 LRRC41Q15345 812 aa27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 RASGRP2Q7LDG7 609 aa27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 ZKSCAN3Q9BRR0 538 aa27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 IL25Q9H293 177 aa27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 GPCPD1Q9NPB8 672 aa27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 U3KPZ7 1027 aaPredicted RBP27.77■■■□□ 2.04
CTDSP1-211ENST00000492545 PLXNA1Q9UIW2 1896 aa27.76■■■□□ 2.04
CTDSP1-211ENST00000492545 FRMPD2Q68DX3 1309 aaPredicted RBP27.76■■■□□ 2.03
CTDSP1-211ENST00000492545 ACVR2BQ13705 512 aa27.76■■■□□ 2.03
CTDSP1-211ENST00000492545 KAT14Q9H8E8 782 aa27.76■■■□□ 2.03
CTDSP1-211ENST00000492545 ASB14A6NK59 587 aa27.75■■■□□ 2.03
CTDSP1-211ENST00000492545 BMP8BP34820 402 aa27.75■■■□□ 2.03
CTDSP1-211ENST00000492545 SNAP25P60880 206 aa27.75■■■□□ 2.03
CTDSP1-211ENST00000492545 TRDNQ13061 729 aa27.75■■■□□ 2.03
CTDSP1-211ENST00000492545 PNMA1Q8ND90 353 aa27.75■■■□□ 2.03
CTDSP1-211ENST00000492545 FGD4Q96M96 766 aa27.75■■■□□ 2.03
CTDSP1-211ENST00000492545 UBAC1Q9BSL1 405 aa27.75■■■□□ 2.03
CTDSP1-211ENST00000492545 FRMPD3Q5JV73 1810 aa27.74■■■□□ 2.03
CTDSP1-211ENST00000492545 ARMCX2Q7L311 632 aa27.74■■■□□ 2.03
CTDSP1-211ENST00000492545 CYP39A1Q9NYL5 469 aa27.74■■■□□ 2.03
CTDSP1-211ENST00000492545 ZHX1Q9UKY1 873 aaPredicted RBP27.74■■■□□ 2.03
CTDSP1-211ENST00000492545 ZMYND8Q9ULU4 1186 aaPredicted RBP27.74■■■□□ 2.03
CTDSP1-211ENST00000492545 DNAH12Q6ZR08 3092 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 SGSM2O43147 1006 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 DUSP11O75319 330 aaKnown RBP27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 MYCNP04198 464 aaPredicted RBP27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 CNTN2Q02246 1040 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 C1orf53Q5VUE5 145 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 CCDC144CPQ8IYA2 1237 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 ENAHQ8N8S7 591 aaPredicted RBP27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 GDF15Q99988 308 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 TSEN34Q9BSV6 310 aaKnown RBP27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 PHF24Q9UPV7 400 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 SMCHD1A6NHR9 2005 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 LAMA4Q16363 1823 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 ALPK3Q96L96 1907 aa27.73■■■□□ 2.03
CTDSP1-211ENST00000492545 WDR19Q8NEZ3 1342 aa27.72■■■□□ 2.03
CTDSP1-211ENST00000492545 FXR1P51114 621 aaKnown RBP eCLIP27.72■■■□□ 2.03
CTDSP1-211ENST00000492545 MUM1L1Q5H9M0 696 aa27.72■■■□□ 2.03
CTDSP1-211ENST00000492545 SLC39A5Q6ZMH5 540 aa27.72■■■□□ 2.03
CTDSP1-211ENST00000492545 TNKSO95271 1327 aa27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 LOC102724159A0A0B4J2E5 919 aa27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 PGK1P00558 417 aa27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 ADCYAP1R1P41586 468 aa27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 ATN1P54259 1190 aaPredicted RBP27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 SNX17Q15036 470 aa27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 PWP2Q15269 919 aaKnown RBP27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 ASPRV1Q53RT3 343 aa27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 CENPQQ7L2Z9 268 aaPredicted RBP27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 MAF1Q9H063 256 aa27.71■■■□□ 2.03
CTDSP1-211ENST00000492545 SOWAHBA6NEL2 793 aa27.7■■■□□ 2.02
CTDSP1-211ENST00000492545 ADAMTS4O75173 837 aa27.7■■■□□ 2.02
CTDSP1-211ENST00000492545 NSMFQ6X4W1 530 aa27.7■■■□□ 2.02
CTDSP1-211ENST00000492545 SPC25Q9HBM1 224 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 826.8 ms