RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 RIN2Q8WYP3 895 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 AK7Q96M32 723 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 RMND1Q9NWS8 449 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 BUB1O43683 1085 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 LEKR1Q6ZMV7 388 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 TMTC1Q8IUR5 882 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 OR8K1Q8NGG5 319 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 TUBGCP2Q9BSJ2 902 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 RSPH14Q9UHP6 348 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 FAN1Q9Y2M0 1017 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
TNFRSF1B-203ENST00000492361 CEP112Q8N8E3 955 aa17.02■□□□□ 0.32
TNFRSF1B-203ENST00000492361 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
TNFRSF1B-203ENST00000492361 CALML4Q96GE6 196 aa17.02■□□□□ 0.32
TNFRSF1B-203ENST00000492361 MTRQ99707 1265 aa17.02■□□□□ 0.32
TNFRSF1B-203ENST00000492361 VSNL1P62760 191 aa17.02■□□□□ 0.32
TNFRSF1B-203ENST00000492361 UBE2SQ16763 222 aa17.02■□□□□ 0.32
TNFRSF1B-203ENST00000492361 MYO6Q9UM54 1294 aa17.02■□□□□ 0.32
TNFRSF1B-203ENST00000492361 POTEMA6NI47 508 aa17.02■□□□□ 0.31
TNFRSF1B-203ENST00000492361 BTDP43251 543 aa17.02■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ATP2C1P98194 919 aaPredicted RBP17.02■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TAF3Q5VWG9 929 aa17.02■□□□□ 0.31
TNFRSF1B-203ENST00000492361 KLHL34Q8N239 644 aa17.02■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TBC1D8O95759 1140 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CACNB3P54284 484 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SLC7A5Q01650 507 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SPAG1Q07617 926 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CCDC40Q4G0X9 1142 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CCDC155Q8N6L0 562 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ZNF579Q8NAF0 562 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TMEM47Q9BQJ4 181 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 GTF2IP78347 998 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SF3A3Q12874 501 aaKnown RBP eCLIP17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 PFKFB3Q16875 520 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 MFSD14BQ5SR56 506 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 RRAGAQ7L523 313 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.01■□□□□ 0.313e-7■■■■■ 247.9
TNFRSF1B-203ENST00000492361 DISC1Q9NRI5 854 aa17.01■□□□□ 0.31
TNFRSF1B-203ENST00000492361 NDUFA10O95299 355 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 PLEKP08567 350 aaPredicted RBP17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TCERG1LQ5VWI1 586 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 MXD3Q9BW11 206 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 STK4Q13043 487 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ZNF658Q5TYW1 1059 aaPredicted RBP17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 RABGGTAQ92696 567 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 RRP36Q96EU6 259 aaKnown RBP17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CNOT6LQ96LI5 555 aaKnown RBP17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 PCDHA4Q9UN74 947 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TTF2Q9UNY4 1162 aaKnown RBP17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 EIF3JO75822 258 aaKnown RBP17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 DDAH1O94760 285 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 C2orf54Q08AI8 447 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 MRC1P22897 1456 aa17■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ATP1A1P05023 1023 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 KIF5AQ12840 1032 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TBX2Q13207 712 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 DOK7Q18PE1 504 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TMC4Q7Z404 712 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 PANX2Q96RD6 677 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 EHD2Q9NZN4 543 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 LRWD1Q9UFC0 647 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CNBD1Q8NA66 436 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 BRIP1Q9BX63 1249 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ARPP21Q9UBL0 812 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 BCL9O00512 1426 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TRAF5O00463 557 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 NONOQ15233 471 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■■■□ 21.5
TNFRSF1B-203ENST00000492361 DNAAF5Q86Y56 855 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SNX29Q8TEQ0 813 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 C6orf50Q9HD87 102 aa16.99■□□□□ 0.31
TNFRSF1B-203ENST00000492361 USP17L5A8MUK1 530 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 FAM107BQ9H098 131 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 IL17RBQ9NRM6 502 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CALCOCO1Q9P1Z2 691 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 H3BQF6 201 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 MEX3CQ5U5Q3 659 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 KCTD1Q719H9 257 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 IFT81Q8WYA0 676 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ATP8A2Q9NTI2 1148 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 HDXQ7Z353 690 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SMARCC1Q92922 1105 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 KIFC2Q96AC6 838 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 MLXIPQ9HAP2 919 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 RWDD2AQ9UIY3 292 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ADAM21Q9UKJ8 722 aa16.98■□□□□ 0.31
TNFRSF1B-203ENST00000492361 NKRFO15226 690 aaKnown RBP eCLIP16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 KRT86O43790 486 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CYLC1P35663 651 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ZSCAN26Q16670 478 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ANKRD40Q6AI12 368 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 FAM196AQ6ZSG2 479 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 MB21D1Q8N884 522 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SCN11AQ9UI33 1791 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 NCK2O43639 380 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms