RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 USO1O60763 962 aaKnown RBP12.03□□□□□ -0.48
SNED1-211ENST00000491761 USP17L8P0C7I0 530 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 RNASE9P60153 205 aaKnown RBP12.03□□□□□ -0.48
SNED1-211ENST00000491761 TBX2Q13207 712 aaPredicted RBP12.03□□□□□ -0.48
SNED1-211ENST00000491761 KCNJ12Q14500 433 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 NEK11Q8NG66 645 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 COBLO75128 1261 aa12.02□□□□□ -0.48
SNED1-211ENST00000491761 COPB1P53618 953 aaKnown RBP12.02□□□□□ -0.48
SNED1-211ENST00000491761 AMPD3Q01432 767 aa12.02□□□□□ -0.48
SNED1-211ENST00000491761 TUBB2AQ13885 445 aa12.02□□□□□ -0.48
SNED1-211ENST00000491761 ZNF772Q68DY9 489 aaPredicted RBP12.02□□□□□ -0.48
SNED1-211ENST00000491761 DGKHQ86XP1 1220 aa12.02□□□□□ -0.48
SNED1-211ENST00000491761 JDP2Q8WYK2 163 aa12.02□□□□□ -0.48
SNED1-211ENST00000491761 TUBB2BQ9BVA1 445 aa12.02□□□□□ -0.48
SNED1-211ENST00000491761 SMIM22K7EJ46 135 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 KRT9P35527 623 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 EARS2Q5JPH6 523 aaKnown RBP12.02□□□□□ -0.49
SNED1-211ENST00000491761 ZNF658Q5TYW1 1059 aaPredicted RBP12.02□□□□□ -0.49
SNED1-211ENST00000491761 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 LZTS2Q9BRK4 669 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 C6orf50Q9HD87 102 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 EXOC1Q9NV70 894 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 INTS13Q9NVM9 706 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 GJA3Q9Y6H8 435 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 H7C1D1 291 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 NT5C2P49902 561 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 SBK1Q52WX2 424 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 GALNT17Q6IS24 598 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 MMRN2Q9H8L6 949 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
SNED1-211ENST00000491761 SAP30BPQ9UHR5 308 aaKnown RBP12.02□□□□□ -0.49
SNED1-211ENST00000491761 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 LUC7L2Q9Y383 392 aaKnown RBP12.02□□□□□ -0.49
SNED1-211ENST00000491761 MYH7P12883 1935 aa12.02□□□□□ -0.49
SNED1-211ENST00000491761 MFAP3LO75121 409 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 TUBB4BP68371 445 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 CCDC93Q567U6 631 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 TRIM65Q6PJ69 517 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 CERS3Q8IU89 383 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 FAM114A1Q8IWE2 563 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 SLF2Q8IX21 1173 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 TGFBRAP1Q8WUH2 860 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 CALML4Q96GE6 196 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 WDR24Q96S15 920 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 SH3GLB2Q9NR46 395 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 NARFQ9UHQ1 456 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
SNED1-211ENST00000491761 GSTTP1A0A1W2PQM5 241 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 TADA3O75528 432 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 GNA11P29992 359 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 CUL4BQ13620 913 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 KRT31Q15323 416 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 RASGRP4Q8TDF6 673 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 CTNNBL1Q8WYA6 563 aaPredicted RBP12.01□□□□□ -0.49
SNED1-211ENST00000491761 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNED1-211ENST00000491761 ADD3Q9UEY8 706 aaKnown RBP12.01□□□□□ -0.49
SNED1-211ENST00000491761 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
SNED1-211ENST00000491761 SMIM23A6NLE4 172 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 INF2Q27J81 1249 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 RRP36Q96EU6 259 aaKnown RBP12.01□□□□□ -0.49
SNED1-211ENST00000491761 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNED1-211ENST00000491761 MYH15Q9Y2K3 1946 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 HGSO14964 777 aaPredicted RBP12.01□□□□□ -0.49
SNED1-211ENST00000491761 PARP1P09874 1014 aaKnown RBP12.01□□□□□ -0.49
SNED1-211ENST00000491761 CDC25AP30304 524 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 ASIC1P78348 528 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 SLC10A5Q5PT55 438 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 MAPKAPK5Q8IW41 473 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 IFT81Q8WYA0 676 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 RABGGTAQ92696 567 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 DYNLL2Q96FJ2 89 aa12.01□□□□□ -0.49
SNED1-211ENST00000491761 A0A087X0B3 334 aa12□□□□□ -0.49
SNED1-211ENST00000491761 PPP1R3GB7ZBB8 358 aa12□□□□□ -0.49
SNED1-211ENST00000491761 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
SNED1-211ENST00000491761 PLCG2P16885 1265 aa12□□□□□ -0.49
SNED1-211ENST00000491761 FUT2Q10981 343 aa12□□□□□ -0.49
SNED1-211ENST00000491761 KRT25Q7Z3Z0 450 aa12□□□□□ -0.49
SNED1-211ENST00000491761 NAPGQ99747 312 aaPredicted RBP12□□□□□ -0.49
SNED1-211ENST00000491761 ADGRG1Q9Y653 693 aa12□□□□□ -0.49
SNED1-211ENST00000491761 AKAP11Q9UKA4 1901 aa12□□□□□ -0.49
SNED1-211ENST00000491761 RPS6KA4O75676 772 aa12□□□□□ -0.49
SNED1-211ENST00000491761 KLRK1P26718 216 aa12□□□□□ -0.49
SNED1-211ENST00000491761 HSPA1LP34931 641 aa12□□□□□ -0.49
SNED1-211ENST00000491761 MTF1Q14872 753 aa12□□□□□ -0.49
SNED1-211ENST00000491761 LETM2Q2VYF4 491 aa12□□□□□ -0.49
SNED1-211ENST00000491761 EEF2KMTQ96G04 330 aa12□□□□□ -0.49
SNED1-211ENST00000491761 BICDL2A1A5D9 508 aa12□□□□□ -0.49
SNED1-211ENST00000491761 H2AFXP16104 143 aaPredicted RBP12□□□□□ -0.49
SNED1-211ENST00000491761 SH3RF1Q7Z6J0 888 aa12□□□□□ -0.49
SNED1-211ENST00000491761 TEX11Q8IYF3 940 aa12□□□□□ -0.49
SNED1-211ENST00000491761 SPATA20Q8TB22 786 aa12□□□□□ -0.49
SNED1-211ENST00000491761 ZC3H12CQ9C0D7 883 aaKnown RBP12□□□□□ -0.49
SNED1-211ENST00000491761 RASSF4Q9H2L5 321 aa12□□□□□ -0.49
SNED1-211ENST00000491761 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
SNED1-211ENST00000491761 MAP3K9P80192 1104 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 NONOQ15233 471 aaKnown RBP eCLIP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms