RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ATP8A2Q9NTI2 1148 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 TLR7Q9NYK1 1049 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 ZHX1Q9UKY1 873 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 BCAR3O75815 825 aa13.42□□□□□ -0.26
CLCNKA-206ENST00000491433 PDE6AP16499 860 aa13.42□□□□□ -0.26
CLCNKA-206ENST00000491433 TEX13BQ9BXU2 312 aa13.42□□□□□ -0.26
CLCNKA-206ENST00000491433 UPF3AQ9H1J1 476 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-206ENST00000491433 ZNF214Q9UL59 606 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-206ENST00000491433 CTDP1Q9Y5B0 961 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-206ENST00000491433 PRRC2BQ5JSZ5 2229 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 CABYRO75952 493 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 AKR1B1P15121 316 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 GJA9P57773 515 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 ACVR2BQ13705 512 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 GNASQ5JWF2 1037 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 FAM126BQ8IXS8 530 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 RPUSD2Q8IZ73 545 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 ANKS1AQ92625 1134 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 CLUAP1Q96AJ1 413 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 LENG1Q96BZ8 264 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 PPP1R12CQ9BZL4 782 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 FBXO40Q9UH90 709 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 YBX2Q9Y2T7 364 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 GBF1Q92538 1859 aa13.41□□□□□ -0.26
CLCNKA-206ENST00000491433 ZNF532Q9HCE3 1301 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 DNAJC25-GNG10A0A024R161 153 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 RAD21O60216 631 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 ACRP10323 421 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 EEF2P13639 858 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 CDK8P49336 464 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 ZKSCAN2Q63HK3 967 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 SNRNP48Q6IEG0 339 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 AACSQ86V21 672 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 REPS2Q8NFH8 660 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 SLF1Q9BQI6 1058 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 FBXO28Q9NVF7 368 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 ZFHX4Q86UP3 3567 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 DCHS1Q96JQ0 3298 aa13.4□□□□□ -0.26
CLCNKA-206ENST00000491433 TPRP12270 2363 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 POTEB3A0JP26 581 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 ATP2A1O14983 1001 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 ZEB2O60315 1214 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 CD4P01730 458 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 NKX3-2P78367 333 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 POTEBQ6S5H4 581 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 C16orf86Q6ZW13 317 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 PRPF38AQ8NAV1 312 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 DYNLL2Q96FJ2 89 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 HIPK3Q9H422 1215 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 PCDHA11Q9Y5I1 949 aa13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 BAZ2AQ9UIF9 1905 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-206ENST00000491433 MYADML2A6NDP7 307 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 ZBED4O75132 1171 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 CYP2D6P10635 497 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 C12orf60Q5U649 245 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 CLEC10AQ8IUN9 316 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 ANKRD35Q8N283 1001 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 LCORLQ8N3X6 602 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 CHST13Q8NET6 341 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 IRF2BPLQ9H1B7 796 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 SLC4A7Q9Y6M7 1214 aa13.38□□□□□ -0.27
CLCNKA-206ENST00000491433 PFKMP08237 780 aa13.37□□□□□ -0.27
CLCNKA-206ENST00000491433 FDX1P10109 184 aa13.37□□□□□ -0.27
CLCNKA-206ENST00000491433 CYP2C18P33260 490 aa13.37□□□□□ -0.27
CLCNKA-206ENST00000491433 COL9A2Q14055 689 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-206ENST00000491433 FTSJ3Q8IY81 847 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-206ENST00000491433 SLC43A3Q8NBI5 491 aa13.37□□□□□ -0.27
CLCNKA-206ENST00000491433 ARMT1Q9H993 441 aa13.37□□□□□ -0.27
CLCNKA-206ENST00000491433 TRANK1O15050 2925 aa13.37□□□□□ -0.27
CLCNKA-206ENST00000491433 MCM3APO60318 1980 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 RIF1Q5UIP0 2472 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 TCRBV5S4A2TA0A5A2 114 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 USP17L12C9JPN9 530 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 USP17L21D6R901 530 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 GOLIM4O00461 696 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 OAZ1P54368 228 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 EVX2Q03828 476 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 TCF15Q12870 199 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 PKN1Q16512 942 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 ARMCX2Q7L311 632 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 OTOP2Q7RTS6 562 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 CLASRPQ8N2M8 674 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 DNAJC2Q99543 621 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 FAM86C1Q9NVL1 165 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 TNNQ9UQP3 1299 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 CACNA1HO95180 2353 aa13.36□□□□□ -0.27
CLCNKA-206ENST00000491433 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 MBD4O95243 580 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 SUPT20HL2P0C7V6 817 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms