RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 KCTD1Q719H9 257 aa10.21□□□□□ -0.78
GABRE-211ENST00000491339 C7orf61Q8IZ16 206 aa10.21□□□□□ -0.78
GABRE-211ENST00000491339 ANKRD35Q8N283 1001 aa10.21□□□□□ -0.78
GABRE-211ENST00000491339 MSL3Q8N5Y2 521 aaKnown RBP10.21□□□□□ -0.78
GABRE-211ENST00000491339 IL17RBQ9NRM6 502 aa10.21□□□□□ -0.78
GABRE-211ENST00000491339 NEDD4P46934 1319 aa10.21□□□□□ -0.78
GABRE-211ENST00000491339 DNM1LO00429 736 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 GSPT1P15170 499 aaKnown RBP10.2□□□□□ -0.78
GABRE-211ENST00000491339 PDE4AP27815 886 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 ZNF792Q3KQV3 632 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.2□□□□□ -0.78
GABRE-211ENST00000491339 ARRDC4Q8NCT1 418 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 TINF2Q9BSI4 451 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 CNNM2Q9H8M5 875 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 INCENPQ9NQS7 918 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 HOMER2Q9NSB8 354 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 PFASO15067 1338 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 SYNGAP1Q96PV0 1343 aa10.2□□□□□ -0.78
GABRE-211ENST00000491339 RARBP10826 455 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 NOVP48745 357 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 CHMP4CQ96CF2 233 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 TTC14Q96N46 770 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 KRT23Q9C075 422 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 RNF146Q9NTX7 359 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 PNMA2Q9UL42 364 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 LCTP09848 1927 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 IGHA2P01877 340 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 AKR1A1P14550 325 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 HABP4Q5JVS0 413 aaKnown RBP10.19□□□□□ -0.78
GABRE-211ENST00000491339 CCDC174Q6PII3 467 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
GABRE-211ENST00000491339 TRPV1Q8NER1 839 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 TMEM47Q9BQJ4 181 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 CCPG1Q9ULG6 757 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 PRR12Q9ULL5 1215 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 RIPK3Q9Y572 518 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 TACC3Q9Y6A5 838 aa10.19□□□□□ -0.78
GABRE-211ENST00000491339 SMCHD1A6NHR9 2005 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 FRMPD2Q68DX3 1309 aaPredicted RBP10.18□□□□□ -0.78
GABRE-211ENST00000491339 SLC34A2O95436 690 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 ALAS1P13196 640 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 MNX1P50219 401 aaPredicted RBP10.18□□□□□ -0.78
GABRE-211ENST00000491339 TRDNQ13061 729 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 SYDE2Q5VT97 1194 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 UBAC1Q9BSL1 405 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 KAT14Q9H8E8 782 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 ZHX1Q9UKY1 873 aaPredicted RBP10.18□□□□□ -0.78
GABRE-211ENST00000491339 POTEB2H3BUK9 544 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 KDM4AO75164 1064 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 COL6A1P12109 1028 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 GPATCH4Q5T3I0 446 aaKnown RBP10.18□□□□□ -0.78
GABRE-211ENST00000491339 RASGRP2Q7LDG7 609 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 DGKHQ86XP1 1220 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 XPNPEP3Q9NQH7 507 aa10.18□□□□□ -0.78
GABRE-211ENST00000491339 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
GABRE-211ENST00000491339 LTBP2Q14767 1821 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 DNAJC25-GNG10A0A024R161 153 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 B4E1Z4 1266 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 ICAM1P05362 532 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 PDHBP11177 359 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 ANO1Q5XXA6 986 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 RNF180Q86T96 592 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 AGBL1Q96MI9 1066 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 ZKSCAN3Q9BRR0 538 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 SENP6Q9GZR1 1112 aaPredicted RBP10.17□□□□□ -0.78
GABRE-211ENST00000491339 RANBP17Q9H2T7 1088 aaKnown RBP10.17□□□□□ -0.78
GABRE-211ENST00000491339 GPCPD1Q9NPB8 672 aa10.17□□□□□ -0.78
GABRE-211ENST00000491339 ZNF536O15090 1300 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 TNKSO95271 1327 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 ZNF543Q08ER8 600 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 PRAMEF19Q5SWL8 479 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 GJC2Q5T442 439 aaPredicted RBP10.16□□□□□ -0.78
GABRE-211ENST00000491339 MAMDC4Q6UXC1 1216 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 BTNL9Q6UXG8 535 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 CENPQQ7L2Z9 268 aaPredicted RBP10.16□□□□□ -0.78
GABRE-211ENST00000491339 RALYLQ86SE5 291 aaKnown RBP10.16□□□□□ -0.78
GABRE-211ENST00000491339 PNMA1Q8ND90 353 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 ZSCAN10Q96SZ4 725 aaPredicted RBP10.16□□□□□ -0.78
GABRE-211ENST00000491339 A1CFQ9NQ94 594 aaKnown RBP10.16□□□□□ -0.78
GABRE-211ENST00000491339 PPP4R2Q9NY27 417 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 PRKAG2Q9UGJ0 569 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 FAM184BQ9ULE4 1060 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 A0A1W2PPC1 479 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 ASB14A6NK59 587 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 CHMLP26374 656 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 SLC16A2P36021 539 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 ASPRV1Q53RT3 343 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 NSMFQ6X4W1 530 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 ARMCX2Q7L311 632 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 CCDC136Q96JN2 1154 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 MPHOSPH6Q99547 160 aaKnown RBP10.16□□□□□ -0.78
GABRE-211ENST00000491339 ABHD16BQ9H3Z7 469 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 SPC25Q9HBM1 224 aa10.16□□□□□ -0.78
GABRE-211ENST00000491339 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.16□□□□□ -0.78
GABRE-211ENST00000491339 ZMYND8Q9ULU4 1186 aaPredicted RBP10.16□□□□□ -0.78
GABRE-211ENST00000491339 WDR19Q8NEZ3 1342 aa10.15□□□□□ -0.78
GABRE-211ENST00000491339 ERICH2A1L162 156 aa10.15□□□□□ -0.78
GABRE-211ENST00000491339 SNHG28P0DPA3 235 aa10.15□□□□□ -0.78
GABRE-211ENST00000491339 SNAP25P60880 206 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms