RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SRBD1Q8N5C6 995 aaKnown RBP26.05■■□□□ 1.76
USF3-203ENST00000491165 C2orf69Q8N8R5 385 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 CTCFLQ8NI51 663 aaPredicted RBP26.05■■□□□ 1.76
USF3-203ENST00000491165 FEZ1Q99689 392 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 CDC25BP30305 580 aa26.04■■□□□ 1.76
USF3-203ENST00000491165 TTBK2Q6IQ55 1244 aa26.04■■□□□ 1.76
USF3-203ENST00000491165 MAP3K14Q99558 947 aa26.04■■□□□ 1.76
USF3-203ENST00000491165 KIAA1683Q9H0B3 1180 aa26.04■■□□□ 1.76
USF3-203ENST00000491165 GOLPH3LQ9H4A5 285 aa26.04■■□□□ 1.76
USF3-203ENST00000491165 EMILIN3Q9NT22 766 aa26.04■■□□□ 1.76
USF3-203ENST00000491165 NRBP1Q9UHY1 535 aa26.04■■□□□ 1.76
USF3-203ENST00000491165 SPDYE5A6NIY4 337 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 CYTH3O43739 400 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 BACE1P56817 501 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 FKBP1BP68106 108 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 ZNF543Q08ER8 600 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 IQCB1Q15051 598 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 TMTC3Q6ZXV5 915 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 RBM46Q8TBY0 533 aaKnown RBP26.03■■□□□ 1.76
USF3-203ENST00000491165 TSC1Q92574 1164 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 OPTNQ96CV9 577 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 MYH6P13533 1939 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 KINO60870 393 aaKnown RBP26.03■■□□□ 1.76
USF3-203ENST00000491165 PARP1P09874 1014 aaKnown RBP26.03■■□□□ 1.76
USF3-203ENST00000491165 SARM1Q6SZW1 724 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 ERO1BQ86YB8 467 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 ZNF710Q8N1W2 664 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 GPCPD1Q9NPB8 672 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 SYNPO2Q9UMS6 1093 aa26.03■■□□□ 1.76
USF3-203ENST00000491165 FDPSP14324 419 aaKnown RBP26.02■■□□□ 1.76
USF3-203ENST00000491165 SLC1A4P43007 532 aa26.02■■□□□ 1.76
USF3-203ENST00000491165 HMGCS2P54868 508 aa26.02■■□□□ 1.76
USF3-203ENST00000491165 FAM160A1Q05DH4 1040 aa26.02■■□□□ 1.76
USF3-203ENST00000491165 LRMPQ12912 555 aa26.02■■□□□ 1.76
USF3-203ENST00000491165 SNW1Q13573 536 aaKnown RBP26.02■■□□□ 1.76
USF3-203ENST00000491165 UBA5Q9GZZ9 404 aa26.02■■□□□ 1.76
USF3-203ENST00000491165 AS3MTQ9HBK9 375 aa26.02■■□□□ 1.76
USF3-203ENST00000491165 CPLX1O14810 134 aa26.02■■□□□ 1.76
USF3-203ENST00000491165 GMCL1Q96IK5 515 aa26.02■■□□□ 1.76
USF3-203ENST00000491165 GOPCQ9HD26 462 aa26.02■■□□□ 1.76
USF3-203ENST00000491165 hCG_1642624A0A1W2PR95 340 aa26.01■■□□□ 1.75
USF3-203ENST00000491165 KLRF2D3W0D1 207 aa26.01■■□□□ 1.75
USF3-203ENST00000491165 PPATQ06203 517 aa26.01■■□□□ 1.75
USF3-203ENST00000491165 C11orf57Q6ZUT1 292 aaPredicted RBP26.01■■□□□ 1.75
USF3-203ENST00000491165 RBM28Q9NW13 759 aaKnown RBP26.01■■□□□ 1.75
USF3-203ENST00000491165 CNTNAP5Q8WYK1 1306 aa26■■□□□ 1.75
USF3-203ENST00000491165 RIOK3O14730 519 aaKnown RBP26■■□□□ 1.75
USF3-203ENST00000491165 SLC16A2P36021 539 aa26■■□□□ 1.75
USF3-203ENST00000491165 ME1P48163 572 aa26■■□□□ 1.75
USF3-203ENST00000491165 GUCY1B3Q02153 619 aa26■■□□□ 1.75
USF3-203ENST00000491165 CCDC96Q2M329 555 aa26■■□□□ 1.75
USF3-203ENST00000491165 FAM83BQ5T0W9 1011 aa26■■□□□ 1.75
USF3-203ENST00000491165 ENGASEQ8NFI3 743 aa26■■□□□ 1.75
USF3-203ENST00000491165 SH2D4AQ9H788 454 aa26■■□□□ 1.75
USF3-203ENST00000491165 IFNAR1P17181 557 aa26■■□□□ 1.75
USF3-203ENST00000491165 KIF5BP33176 963 aa26■■□□□ 1.75
USF3-203ENST00000491165 HUNKP57058 714 aa26■■□□□ 1.75
USF3-203ENST00000491165 SAPCD2Q86UD0 394 aa26■■□□□ 1.75
USF3-203ENST00000491165 PARP14Q460N5 1801 aa26■■□□□ 1.75
USF3-203ENST00000491165 VCAM1P19320 739 aa25.99■■□□□ 1.75
USF3-203ENST00000491165 FSIP1Q8NA03 581 aa25.99■■□□□ 1.75
USF3-203ENST00000491165 DCAF4Q8WV16 495 aa25.99■■□□□ 1.75
USF3-203ENST00000491165 SLC10A4Q96EP9 437 aa25.99■■□□□ 1.75
USF3-203ENST00000491165 CCDC196A0A1B0GTZ2 297 aa25.99■■□□□ 1.75
USF3-203ENST00000491165 DHX16O60231 1041 aaKnown RBP25.99■■□□□ 1.75
USF3-203ENST00000491165 BMP3P12645 472 aa25.99■■□□□ 1.75
USF3-203ENST00000491165 PPP2R5BQ15173 497 aa25.99■■□□□ 1.75
USF3-203ENST00000491165 ASPRV1Q53RT3 343 aa25.99■■□□□ 1.75
USF3-203ENST00000491165 CCDC94Q9BW85 323 aaPredicted RBP25.99■■□□□ 1.75
USF3-203ENST00000491165 ANO10Q9NW15 660 aa25.99■■□□□ 1.75
USF3-203ENST00000491165 MKRN3Q13064 507 aaKnown RBP25.98■■□□□ 1.75
USF3-203ENST00000491165 MRFAP1L1Q96HT8 127 aa25.98■■□□□ 1.75
USF3-203ENST00000491165 AIFM3Q96NN9 605 aa25.98■■□□□ 1.75
USF3-203ENST00000491165 ZMYND15Q9H091 742 aa25.98■■□□□ 1.75
USF3-203ENST00000491165 LOC285556D6RIA3 1793 aa25.98■■□□□ 1.75
USF3-203ENST00000491165 RLFQ13129 1914 aa25.97■■□□□ 1.75
USF3-203ENST00000491165 SLC26A6Q9BXS9 759 aa25.97■■□□□ 1.75
USF3-203ENST00000491165 FBXO28Q9NVF7 368 aa25.97■■□□□ 1.75
USF3-203ENST00000491165 BECN2A8MW95 431 aa25.97■■□□□ 1.75
USF3-203ENST00000491165 TMEM232C9JQI7 657 aa25.97■■□□□ 1.75
USF3-203ENST00000491165 PPIL2Q13356 520 aa25.97■■□□□ 1.75
USF3-203ENST00000491165 GPATCH4Q5T3I0 446 aaKnown RBP25.97■■□□□ 1.75
USF3-203ENST00000491165 ARID3AQ99856 593 aa25.97■■□□□ 1.75
USF3-203ENST00000491165 RTEL1Q9NZ71 1219 aa25.97■■□□□ 1.75
USF3-203ENST00000491165 UNCXA6NJT0 531 aa25.96■■□□□ 1.75
USF3-203ENST00000491165 CACTINQ8WUQ7 758 aaKnown RBP25.96■■□□□ 1.75
USF3-203ENST00000491165 MRPS27Q92552 414 aaKnown RBP25.96■■□□□ 1.75
USF3-203ENST00000491165 GJB4Q9NTQ9 266 aa25.96■■□□□ 1.75
USF3-203ENST00000491165 KCNH4Q9UQ05 1017 aa25.96■■□□□ 1.75
USF3-203ENST00000491165 CEP350Q5VT06 3117 aa25.96■■□□□ 1.75
USF3-203ENST00000491165 USP14P54578 494 aa25.96■■□□□ 1.75
USF3-203ENST00000491165 CCDC144BQ3MJ40 725 aa25.96■■□□□ 1.75
USF3-203ENST00000491165 SH3D19Q5HYK7 790 aa25.96■■□□□ 1.75
USF3-203ENST00000491165 LPAR1Q92633 364 aa25.96■■□□□ 1.75
USF3-203ENST00000491165 C19orf81C9J6K1 198 aa25.95■■□□□ 1.74
USF3-203ENST00000491165 FMNL1O95466 1100 aaPredicted RBP25.95■■□□□ 1.74
USF3-203ENST00000491165 PKN1Q16512 942 aa25.95■■□□□ 1.74
USF3-203ENST00000491165 TREML2Q5T2D2 321 aa25.95■■□□□ 1.74
USF3-203ENST00000491165 WNK4Q96J92 1243 aa25.95■■□□□ 1.74
USF3-203ENST00000491165 C12orf42Q96LP6 360 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms