RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 AGBL1Q96MI9 1066 aa17.87■□□□□ 0.45
COL27A1-206ENST00000490831 TINF2Q9BSI4 451 aa17.87■□□□□ 0.45
COL27A1-206ENST00000490831 MTMR7Q9Y216 660 aa17.87■□□□□ 0.45
COL27A1-206ENST00000490831 SEPT4O43236 478 aa17.86■□□□□ 0.45
COL27A1-206ENST00000490831 COL6A1P12109 1028 aa17.86■□□□□ 0.45
COL27A1-206ENST00000490831 GPATCH4Q5T3I0 446 aaKnown RBP17.86■□□□□ 0.45
COL27A1-206ENST00000490831 PNMA1Q8ND90 353 aa17.86■□□□□ 0.45
COL27A1-206ENST00000490831 DDX11Q96FC9 970 aa17.86■□□□□ 0.45
COL27A1-206ENST00000490831 ACAD9Q9H845 621 aa17.86■□□□□ 0.45
COL27A1-206ENST00000490831 TNKSO95271 1327 aa17.86■□□□□ 0.45
COL27A1-206ENST00000490831 ICAM1P05362 532 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 SLC16A2P36021 539 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 SEC23AQ15436 765 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 FRMPD2Q68DX3 1309 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-206ENST00000490831 SKAP1Q86WV1 359 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 ANKRD35Q8N283 1001 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 FGD4Q96M96 766 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 SYNGAP1Q96PV0 1343 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 ESYT1Q9BSJ8 1104 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 GPCPD1Q9NPB8 672 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 RNF146Q9NTX7 359 aa17.85■□□□□ 0.45
COL27A1-206ENST00000490831 CNGA1P29973 690 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 SNAP25P60880 206 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 PRAMEF19Q5SWL8 479 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 CCDC174Q6PII3 467 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 CYB5R4Q7L1T6 521 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 TRERF1Q96PN7 1200 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 UBAC1Q9BSL1 405 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 LSG1Q9H089 658 aaKnown RBP17.84■□□□□ 0.45
COL27A1-206ENST00000490831 C11orf49Q9H6J7 331 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 KAT14Q9H8E8 782 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 A1CFQ9NQ94 594 aaKnown RBP17.84■□□□□ 0.45
COL27A1-206ENST00000490831 HOMER2Q9NSB8 354 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 PNMA2Q9UL42 364 aa17.84■□□□□ 0.45
COL27A1-206ENST00000490831 PFASO15067 1338 aa17.83■□□□□ 0.44
COL27A1-206ENST00000490831 ZNF865P0CJ78 1059 aaPredicted RBP17.83■□□□□ 0.44
COL27A1-206ENST00000490831 ALAS1P13196 640 aa17.83■□□□□ 0.44
COL27A1-206ENST00000490831 TRDNQ13061 729 aa17.83■□□□□ 0.44
COL27A1-206ENST00000490831 FAM133AQ8N9E0 248 aa17.83■□□□□ 0.44
COL27A1-206ENST00000490831 DPF3Q92784 378 aa17.83■□□□□ 0.44
COL27A1-206ENST00000490831 CCDC136Q96JN2 1154 aa17.83■□□□□ 0.44
COL27A1-206ENST00000490831 CCPG1Q9ULG6 757 aa17.83■□□□□ 0.44
COL27A1-206ENST00000490831 RBM8AQ9Y5S9 174 aaKnown RBP17.83■□□□□ 0.44
COL27A1-206ENST00000490831 TAF6LQ9Y6J9 622 aa17.83■□□□□ 0.44
COL27A1-206ENST00000490831 CEP290O15078 2479 aa17.83■□□□□ 0.44
COL27A1-206ENST00000490831 ALPK3Q96L96 1907 aa17.82■□□□□ 0.44
COL27A1-206ENST00000490831 WDR19Q8NEZ3 1342 aa17.82■□□□□ 0.44
COL27A1-206ENST00000490831 E7EWF7 191 aa17.82■□□□□ 0.44
COL27A1-206ENST00000490831 SNAI1O95863 264 aaPredicted RBP17.82■□□□□ 0.44
COL27A1-206ENST00000490831 MUM1L1Q5H9M0 696 aa17.82■□□□□ 0.44
COL27A1-206ENST00000490831 STOX1Q6ZVD7 989 aa17.82■□□□□ 0.44
COL27A1-206ENST00000490831 SMCHD1A6NHR9 2005 aa17.82■□□□□ 0.44
COL27A1-206ENST00000490831 H0YGN5 161 aa17.81■□□□□ 0.44
COL27A1-206ENST00000490831 DNM1LO00429 736 aa17.81■□□□□ 0.44
COL27A1-206ENST00000490831 TAL1P17542 331 aaPredicted RBP17.81■□□□□ 0.44
COL27A1-206ENST00000490831 ASPRV1Q53RT3 343 aa17.81■□□□□ 0.44
COL27A1-206ENST00000490831 IFIT1BQ5T764 474 aaKnown RBP17.81■□□□□ 0.44
COL27A1-206ENST00000490831 KIAA1211Q6ZU35 1233 aa17.81■□□□□ 0.44
COL27A1-206ENST00000490831 NCOA7Q8NI08 942 aa17.81■□□□□ 0.44
COL27A1-206ENST00000490831 CYP39A1Q9NYL5 469 aa17.81■□□□□ 0.44
COL27A1-206ENST00000490831 CNPY2Q9Y2B0 182 aa17.81■□□□□ 0.44
COL27A1-206ENST00000490831 NR2E3Q9Y5X4 410 aa17.81■□□□□ 0.44
COL27A1-206ENST00000490831 POTEB2H3BUK9 544 aa17.8■□□□□ 0.44
COL27A1-206ENST00000490831 GOLGA8HP0CJ92 632 aa17.8■□□□□ 0.44
COL27A1-206ENST00000490831 CNTN2Q02246 1040 aa17.8■□□□□ 0.44
COL27A1-206ENST00000490831 MB21D2Q8IYB1 491 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-206ENST00000490831 ARRDC4Q8NCT1 418 aa17.8■□□□□ 0.44
COL27A1-206ENST00000490831 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-206ENST00000490831 SOWAHBA6NEL2 793 aa17.79■□□□□ 0.44
COL27A1-206ENST00000490831 EVI5O60447 810 aa17.79■□□□□ 0.44
COL27A1-206ENST00000490831 AKR1A1P14550 325 aa17.79■□□□□ 0.44
COL27A1-206ENST00000490831 NECTIN1Q15223 517 aa17.79■□□□□ 0.44
COL27A1-206ENST00000490831 ARMCX2Q7L311 632 aa17.79■□□□□ 0.44
COL27A1-206ENST00000490831 RALYLQ86SE5 291 aaKnown RBP17.79■□□□□ 0.44
COL27A1-206ENST00000490831 CLEC4DQ8WXI8 215 aa17.79■□□□□ 0.44
COL27A1-206ENST00000490831 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
COL27A1-206ENST00000490831 KATNBL1Q9H079 304 aa17.79■□□□□ 0.44
COL27A1-206ENST00000490831 ABHD16BQ9H3Z7 469 aa17.79■□□□□ 0.44
COL27A1-206ENST00000490831 ASTN1O14525 1302 aa17.78■□□□□ 0.44
COL27A1-206ENST00000490831 PARP1P09874 1014 aaKnown RBP17.78■□□□□ 0.44
COL27A1-206ENST00000490831 RARBP10826 455 aa17.78■□□□□ 0.44
COL27A1-206ENST00000490831 ANTXR2P58335 489 aa17.78■□□□□ 0.44
COL27A1-206ENST00000490831 ANO1Q5XXA6 986 aa17.78■□□□□ 0.44
COL27A1-206ENST00000490831 ADGRF4Q8IZF3 695 aa17.78■□□□□ 0.44
COL27A1-206ENST00000490831 UBA5Q9GZZ9 404 aa17.78■□□□□ 0.44
COL27A1-206ENST00000490831 MAF1Q9H063 256 aa17.78■□□□□ 0.44
COL27A1-206ENST00000490831 LCTP09848 1927 aa17.78■□□□□ 0.44
COL27A1-206ENST00000490831 MCM3APO60318 1980 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 LOC102724159A0A0B4J2E5 919 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 ASB14A6NK59 587 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 NFIBO00712 420 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 IFIT3O14879 490 aaKnown RBP17.77■□□□□ 0.44
COL27A1-206ENST00000490831 SLC27A2O14975 620 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 NEFLP07196 543 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 ACVR2BQ13705 512 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 PWP2Q15269 919 aaKnown RBP17.77■□□□□ 0.44
COL27A1-206ENST00000490831 LRRC41Q15345 812 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 NSMFQ6X4W1 530 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms