RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 GPRC5AQ8NFJ5 357 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 ACER1Q8TDN7 264 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 DEFB118Q96PH6 123 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 CRNKL1Q9BZJ0 848 aaKnown RBP8.95□□□□□ -0.98
CLDN1-202ENST00000490800 CABP5Q9NP86 173 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 MCM9Q9NXL9 1143 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 MORF4L1Q9UBU8 362 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 FOXP2O15409 715 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 GPAA1O43292 621 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 PRKAB2O43741 272 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 HSPD1P10809 573 aaKnown RBP8.94□□□□□ -0.98
CLDN1-202ENST00000490800 CYP2B6P20813 491 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 GUCY1A2P33402 732 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 PTPN5P54829 565 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 TRIM32Q13049 653 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 NECTIN1Q15223 517 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 VPS53Q5VIR6 699 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 CREB3L3Q68CJ9 461 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 UBE2Q1Q7Z7E8 422 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 SDR42E1Q8WUS8 393 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 USB1Q9BQ65 265 aaKnown RBP8.94□□□□□ -0.98
CLDN1-202ENST00000490800 PAGR1Q9BTK6 254 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 DSCC1Q9BVC3 393 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 ARMT1Q9H993 441 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 DCP1AQ9NPI6 582 aaPredicted RBP8.94□□□□□ -0.98
CLDN1-202ENST00000490800 SNX14Q9Y5W7 946 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 RBBP6Q7Z6E9 1792 aaKnown RBP8.94□□□□□ -0.98
CLDN1-202ENST00000490800 SIPA1L1O43166 1804 aa8.94□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L15C9J2P7 530 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L13C9JLJ4 530 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L11C9JVI0 530 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L18D6R9N7 530 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L22D6RA61 530 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L17D6RBQ6 530 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L19D6RCP7 530 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L20D6RJB6 530 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 MPHOSPH10O00566 681 aaKnown RBP8.93□□□□□ -0.98
CLDN1-202ENST00000490800 SLC27A2O14975 620 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 CYP2D6P10635 497 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 ERVK-9P63128 1117 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 ERVK-24P63145 666 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 GABPAQ06546 454 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L24Q0WX57 530 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 SEPT2Q15019 361 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 BRICD5Q6PL45 260 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 CATSPERGQ6ZRH7 1159 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 CCAR1Q8IX12 1150 aaKnown RBP8.93□□□□□ -0.98
CLDN1-202ENST00000490800 SNX21Q969T3 373 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 DYNLL2Q96FJ2 89 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 C12orf42Q96LP6 360 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 STRBPQ96SI9 672 aaKnown RBP8.93□□□□□ -0.98
CLDN1-202ENST00000490800 FEZ1Q99689 392 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 PORCNQ9H237 461 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 PAK6Q9NQU5 681 aaPredicted RBP8.93□□□□□ -0.98
CLDN1-202ENST00000490800 PTPRFP10586 1907 aa8.93□□□□□ -0.98
CLDN1-202ENST00000490800 RPTORQ8N122 1335 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 A0A1W2PRG0 241 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 CNMDO75829 334 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 FARP2O94887 1054 aaPredicted RBP8.92□□□□□ -0.98
CLDN1-202ENST00000490800 MBD4O95243 580 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 CD2BP2O95400 341 aaKnown RBP8.92□□□□□ -0.98
CLDN1-202ENST00000490800 HMGCRP04035 888 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 USP14P54578 494 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 BECN1Q14457 450 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 NUDT12Q9BQG2 462 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 HTATIP2Q9BUP3 242 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 KIAA1683Q9H0B3 1180 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLDN1-202ENST00000490800 TAF6LQ9Y6J9 622 aa8.92□□□□□ -0.98
CLDN1-202ENST00000490800 MAST2Q6P0Q8 1798 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 CYP2D7A0A087X1C5 515 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L12C9JPN9 530 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L21D6R901 530 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 SMIM22K7EJ46 135 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 VCAM1P19320 739 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 MAPK4P31152 587 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 ADCK5Q3MIX3 580 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 RNF20Q5VTR2 975 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 GPR142Q7Z601 462 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 PLEKHH3Q7Z736 793 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 SLC44A5Q8NCS7 719 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 EPS8L1Q8TE68 723 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 GTF3C2Q8WUA4 911 aaPredicted RBP8.91□□□□□ -0.98
CLDN1-202ENST00000490800 TRIB2Q92519 343 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 USP6NLQ92738 828 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 THAP11Q96EK4 314 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 PAWRQ96IZ0 340 aaKnown RBP8.91□□□□□ -0.98
CLDN1-202ENST00000490800 TM6SF1Q9BZW5 370 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 RPAP3Q9H6T3 665 aaPredicted RBP8.91□□□□□ -0.98
CLDN1-202ENST00000490800 ATP8A2Q9NTI2 1148 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 RABGAP1Q9Y3P9 1069 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 SLC4A4Q9Y6R1 1079 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 MGAMO43451 1857 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 CDK5RAP2Q96SN8 1893 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 ATAD5Q96QE3 1844 aa8.91□□□□□ -0.98
CLDN1-202ENST00000490800 PATL2C9JE40 543 aaKnown RBP8.9□□□□□ -0.98
CLDN1-202ENST00000490800 TLL1O43897 1013 aa8.9□□□□□ -0.98
CLDN1-202ENST00000490800 FGAP02671 866 aa8.9□□□□□ -0.98
CLDN1-202ENST00000490800 CYP21A2P08686 494 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms