RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CDC37Q16543 378 aaPredicted RBP12.65□□□□□ -0.38
VARS2-210ENST00000490699 KIAA1755Q5JYT7 1200 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 TREML2Q5T2D2 321 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 CCAR1Q8IX12 1150 aaKnown RBP12.65□□□□□ -0.38
VARS2-210ENST00000490699 SRBD1Q8N5C6 995 aaKnown RBP12.65□□□□□ -0.38
VARS2-210ENST00000490699 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 PIBF1Q8WXW3 757 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 BRI3BPQ8WY22 251 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 PHKBQ93100 1093 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 DDX11Q96FC9 970 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 ASCC2Q9H1I8 757 aaPredicted RBP12.65□□□□□ -0.38
VARS2-210ENST00000490699 RIOX1Q9H6W3 641 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 CWC22Q9HCG8 908 aaKnown RBP12.65□□□□□ -0.38
VARS2-210ENST00000490699 BRMS1Q9HCU9 246 aa12.65□□□□□ -0.38
VARS2-210ENST00000490699 WDR33Q9C0J8 1336 aaKnown RBP12.64□□□□□ -0.39
VARS2-210ENST00000490699 MYH6P13533 1939 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
VARS2-210ENST00000490699 FAM155AB1AL88 458 aaPredicted RBP12.64□□□□□ -0.39
VARS2-210ENST00000490699 BTBD19C9JJ37 291 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 H3BQV1 296 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 COPB2P35606 906 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 MAP2K2P36507 400 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 OAZ1P54368 228 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 KIF23Q02241 960 aaPredicted RBP12.64□□□□□ -0.39
VARS2-210ENST00000490699 PLS1Q14651 629 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 RASGRP2Q7LDG7 609 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 FBXO11Q86XK2 927 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 CMTR1Q8N1G2 835 aaKnown RBP12.64□□□□□ -0.39
VARS2-210ENST00000490699 NSUN7Q8NE18 718 aaKnown RBP12.64□□□□□ -0.39
VARS2-210ENST00000490699 IPO9Q96P70 1041 aaKnown RBP12.64□□□□□ -0.39
VARS2-210ENST00000490699 AMNQ9BXJ7 453 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 ZFYVE28Q9HCC9 887 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 FAM217BQ9NTX9 383 aaPredicted RBP12.64□□□□□ -0.39
VARS2-210ENST00000490699 FBXO28Q9NVF7 368 aa12.64□□□□□ -0.39
VARS2-210ENST00000490699 V9GY48 417 aaPredicted RBP12.64□□□□□ -0.39
VARS2-210ENST00000490699 SCG2P13521 617 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 GJB2P29033 226 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 NAPAP54920 295 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 HERVK_113P62684 666 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 CCNA1P78396 465 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 GNL2Q13823 731 aaKnown RBP12.63□□□□□ -0.39
VARS2-210ENST00000490699 SAFBQ15424 915 aaKnown RBP eCLIP12.63□□□□□ -0.39
VARS2-210ENST00000490699 TAF1CQ15572 869 aaPredicted RBP12.63□□□□□ -0.39
VARS2-210ENST00000490699 NTRK3Q16288 839 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 PPP1R18Q6NYC8 613 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 CCDC174Q6PII3 467 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 FAM177A1Q8N128 213 aaPredicted RBP12.63□□□□□ -0.39
VARS2-210ENST00000490699 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 ATG4CQ96DT6 458 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 PIGSQ96S52 555 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 BEGAINQ9BUH8 593 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 GLT8D2Q9H1C3 349 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
VARS2-210ENST00000490699 JMJD4Q9H9V9 463 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 CCPG1Q9ULG6 757 aa12.63□□□□□ -0.39
VARS2-210ENST00000490699 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
VARS2-210ENST00000490699 VWA5AO00534 786 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 ICAM1P05362 532 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 CALML3P27482 149 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 TM4SF4P48230 202 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 PFKFB3Q16875 520 aaPredicted RBP12.62□□□□□ -0.39
VARS2-210ENST00000490699 QRICH1Q2TAL8 776 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 GPAT2Q6NUI2 795 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 LBX2Q6XYB7 198 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 CPXCR1Q8N123 301 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 SMARCC2Q8TAQ2 1214 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 BICD2Q8TD16 824 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 C8orf76Q96K31 380 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 PAGR1Q9BTK6 254 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 TEX13BQ9BXU2 312 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 CPVLQ9H3G5 476 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 SLC38A10Q9HBR0 1119 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 SH3GLB2Q9NR46 395 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 MRPL11Q9Y3B7 192 aaKnown RBP12.62□□□□□ -0.39
VARS2-210ENST00000490699 RABGAP1Q9Y3P9 1069 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 ABCB11O95342 1321 aa12.62□□□□□ -0.39
VARS2-210ENST00000490699 CYTH3O43739 400 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 JAK2O60674 1132 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 GNA11P29992 359 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 NLRP5P59047 1200 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 FUT2Q10981 343 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 MOGSQ13724 837 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 TKFCQ3LXA3 575 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 USH1GQ495M9 461 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 LARP1BQ659C4 914 aaKnown RBP12.61□□□□□ -0.39
VARS2-210ENST00000490699 NBPF11Q86T75 865 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 CUL5Q93034 780 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 P2RX7Q99572 595 aaKnown RBP12.61□□□□□ -0.39
VARS2-210ENST00000490699 C6orf50Q9HD87 102 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 FBXO40Q9UH90 709 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 PCDHA1Q9Y5I3 950 aa12.61□□□□□ -0.39
VARS2-210ENST00000490699 hCG_1642624A0A1W2PR95 340 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms