RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 PALM3A6NDB9 673 aaPredicted RBP19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 CAPN2P17655 700 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 TRIM32Q13049 653 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 ASPRV1Q53RT3 343 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 BTNL9Q6UXG8 535 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 KCTD1Q719H9 257 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 TRMT44Q8IYL2 757 aaKnown RBP19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 RPTORQ8N122 1335 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 APBA2Q99767 749 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 HTATIP2Q9BUP3 242 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 HMX1Q9NP08 348 aaPredicted RBP19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 FBXO28Q9NVF7 368 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 HOXC10Q9NYD6 342 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 MAD2L2Q9UI95 211 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 MTMR7Q9Y216 660 aa19.89■□□□□ 0.77
RAPGEF3-212ENST00000490387 FRMPD2Q68DX3 1309 aaPredicted RBP19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 PARP1P09874 1014 aaKnown RBP19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 CCDC96Q2M329 555 aa19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 MORN1Q5T089 497 aa19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 GPATCH4Q5T3I0 446 aaKnown RBP19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 UBE2Q1Q7Z7E8 422 aa19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 DPF3Q92784 378 aa19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 CHMP4CQ96CF2 233 aa19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 FEM1BQ9UK73 627 aa19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 ADAMTS5Q9UNA0 930 aa19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 IVNS1ABPQ9Y6Y0 642 aa19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 COL11A1P12107 1806 aaPredicted RBP19.88■□□□□ 0.77
RAPGEF3-212ENST00000490387 TMEM232C9JQI7 657 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 FLOT1O75955 427 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 SLC34A2O95436 690 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 GOLGA8HP0CJ92 632 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 CALM1P0DP23 149 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 CALM2P0DP24 149 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 CALM3P0DP25 149 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 RXRAP19793 462 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 MAP2K5Q13163 448 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 ANKRD1Q15327 319 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 TTBK2Q6IQ55 1244 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 MICU3Q86XE3 530 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 STAG2Q8N3U4 1231 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 USP6NLQ92738 828 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 SLF1Q9BQI6 1058 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 CRISPLD2Q9H0B8 497 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 PPP1R9AQ9ULJ8 1098 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 TPCN1Q9ULQ1 816 aa19.87■□□□□ 0.77
RAPGEF3-212ENST00000490387 CEP290O15078 2479 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 GOLGA8BA8MQT2 603 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 ZBTB43O43298 467 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 PRKAR2AP13861 404 aaKnown RBP19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 PDIA3P30101 505 aaKnown RBP19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 DSG3P32926 999 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 STAT2P52630 851 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 SLC35G1Q2M3R5 365 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 SAMD1Q6SPF0 538 aaPredicted RBP19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 RAB11FIP4Q86YS3 637 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 FANCBQ8NB91 859 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 NUP133Q8WUM0 1156 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 ZNF274Q96GC6 653 aaPredicted RBP19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 LARP6Q9BRS8 491 aaKnown RBP19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 GPCPD1Q9NPB8 672 aa19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 FAM217BQ9NTX9 383 aaPredicted RBP19.86■□□□□ 0.77
RAPGEF3-212ENST00000490387 BAZ2BQ9UIF8 2168 aaKnown RBP19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 SLC15A5A6NIM6 579 aa19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 PTPREP23469 700 aa19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 CCL14Q16627 93 aa19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 MAP3K21Q5TCX8 1036 aa19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 SYNE3Q6ZMZ3 975 aa19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 FAM160B2Q86V87 743 aa19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 MB21D1Q8N884 522 aa19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 PRPF38AQ8NAV1 312 aaKnown RBP19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 CHURC1Q8WUH1 139 aa19.85■□□□□ 0.77
RAPGEF3-212ENST00000490387 KLRF2D3W0D1 207 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 CD2BP2O95400 341 aaKnown RBP19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 KIF5BP33176 963 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 SLC16A2P36021 539 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 PLS1Q14651 629 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 CCDC144CPQ8IYA2 1237 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 REPS2Q8NFH8 660 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 CTCFLQ8NI51 663 aaPredicted RBP19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 ATG4CQ96DT6 458 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 MOV10L1Q9BXT6 1211 aaKnown RBP19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 SPATC1LQ9H0A9 340 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 CPVLQ9H3G5 476 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 PRR12Q9ULL5 1215 aa19.84■□□□□ 0.77
RAPGEF3-212ENST00000490387 GOLGA8AA7E2F4 631 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 H0YGN5 161 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 VWA5AO00534 786 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 CDC27P30260 824 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 METAP2P50579 478 aaKnown RBP eCLIP19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 CACNB2Q08289 660 aaPredicted RBP19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 FUT2Q10981 343 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 GRB14Q14449 540 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 PPP2R5BQ15173 497 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 RTN1Q16799 776 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 SYDE2Q5VT97 1194 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 TMTC3Q6ZXV5 915 aa19.83■□□□□ 0.77
RAPGEF3-212ENST00000490387 ZNF236Q9UL36 1845 aa19.83■□□□□ 0.76
RAPGEF3-212ENST00000490387 CYTH3O43739 400 aa19.82■□□□□ 0.76
RAPGEF3-212ENST00000490387 ST18O60284 1047 aa19.82■□□□□ 0.76
RAPGEF3-212ENST00000490387 PFKFB2O60825 505 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms