RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 GRB14Q14449 540 aa16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 CCAR1Q8IX12 1150 aaKnown RBP16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 CCDC144CPQ8IYA2 1237 aa16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 MAP3K14Q99558 947 aa16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 MROH8Q9H579 483 aa16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 JMJD4Q9H9V9 463 aa16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 BAZ2BQ9UIF8 2168 aaKnown RBP16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.27
SRGAP3-208ENST00000490348 ICAM1P05362 532 aa16.77■□□□□ 0.27
SRGAP3-208ENST00000490348 PRMT2P55345 433 aa16.77■□□□□ 0.27
SRGAP3-208ENST00000490348 TOB2Q14106 344 aaPredicted RBP16.77■□□□□ 0.27
SRGAP3-208ENST00000490348 MICU3Q86XE3 530 aa16.77■□□□□ 0.27
SRGAP3-208ENST00000490348 TNS4Q8IZW8 715 aa16.77■□□□□ 0.27
SRGAP3-208ENST00000490348 BRF1Q92994 677 aa16.77■□□□□ 0.27
SRGAP3-208ENST00000490348 HPS5Q9UPZ3 1129 aa16.77■□□□□ 0.27
SRGAP3-208ENST00000490348 PLEKHA8P1O95397 391 aa16.76■□□□□ 0.27
SRGAP3-208ENST00000490348 SLC4A3P48751 1232 aa16.76■□□□□ 0.27
SRGAP3-208ENST00000490348 APOBRQ0VD83 1088 aa16.76■□□□□ 0.27
SRGAP3-208ENST00000490348 IRF5Q13568 498 aa16.76■□□□□ 0.27
SRGAP3-208ENST00000490348 MTMR8Q96EF0 704 aa16.76■□□□□ 0.27
SRGAP3-208ENST00000490348 HOMER2Q9NSB8 354 aa16.76■□□□□ 0.27
SRGAP3-208ENST00000490348 CTDP1Q9Y5B0 961 aaPredicted RBP16.76■□□□□ 0.27
SRGAP3-208ENST00000490348 CYP46A1Q9Y6A2 500 aa16.76■□□□□ 0.27
SRGAP3-208ENST00000490348 KLF18A0A0U1RQI7 1052 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 SLC15A5A6NIM6 579 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 ADORA2AP29274 412 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 CDC37Q16543 378 aaPredicted RBP16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 CMTR1Q8N1G2 835 aaKnown RBP16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 FANCBQ8NB91 859 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 RAET1EQ8TD07 263 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 SOCS4Q8WXH5 440 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 KIF2CQ99661 725 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 NUDT12Q9BQG2 462 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 RIOX1Q9H6W3 641 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 VAT1LQ9HCJ6 419 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 FAM217BQ9NTX9 383 aaPredicted RBP16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 CCPG1Q9ULG6 757 aa16.75■□□□□ 0.27
SRGAP3-208ENST00000490348 STRNO43815 780 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 PPP1R11O60927 126 aaPredicted RBP16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 COBLO75128 1261 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 ELNP15502 786 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 CYP2B6P20813 491 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 MAP2K5Q13163 448 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 QRICH1Q2TAL8 776 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 MUM1L1Q5H9M0 696 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 ABRAQ8N0Z2 381 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 SRBD1Q8N5C6 995 aaKnown RBP16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 SH3TC2Q8TF17 1288 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 CWC22Q9HCG8 908 aaKnown RBP16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 ZNF236Q9UL36 1845 aa16.74■□□□□ 0.27
SRGAP3-208ENST00000490348 ZBTB43O43298 467 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 CALM1P0DP23 149 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 CALM2P0DP24 149 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 CALM3P0DP25 149 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 FCER1AP12319 257 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 ALAS1P13196 640 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 COPB2P35606 906 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 EVCP57679 992 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 FGD1P98174 961 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 CCL14Q16627 93 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 TRERF1Q96PN7 1200 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 MMP19Q99542 508 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 RNF146Q9NTX7 359 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 FLRT1Q9NZU1 646 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 IVNS1ABPQ9Y6Y0 642 aa16.73■□□□□ 0.27
SRGAP3-208ENST00000490348 DHX16O60231 1041 aaKnown RBP16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 ADCY3O60266 1144 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 PGK2P07205 417 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 HOXC6P09630 235 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 XRCC5P13010 732 aaKnown RBP16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 CDC27P30260 824 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 KIF5BP33176 963 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 CHST13Q8NET6 341 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 NPLOC4Q8TAT6 608 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 CLEC4DQ8WXI8 215 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 TRIB2Q92519 343 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 ABHD8Q96I13 439 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 PIGSQ96S52 555 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 NID2Q14112 1375 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 GOLGA8BA8MQT2 603 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 NFIBO00712 420 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 IGHA2P01877 340 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 GRK4P32298 578 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 RGS2P41220 211 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 FUT2Q10981 343 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 USH1GQ495M9 461 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 SLC9C1Q4G0N8 1177 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 PXYLP1Q8TE99 480 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 ARMC5Q96C12 935 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 APBA2Q99767 749 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 SPZ1Q9BXG8 430 aa16.72■□□□□ 0.27
SRGAP3-208ENST00000490348 BACH2Q9BYV9 841 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms