RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 CENPQQ7L2Z9 268 aaPredicted RBP23.22■■□□□ 1.31
SMC4-222ENST00000490207 AGBL1Q96MI9 1066 aa23.22■■□□□ 1.31
SMC4-222ENST00000490207 KRT23Q9C075 422 aa23.22■■□□□ 1.31
SMC4-222ENST00000490207 NRBP1Q9UHY1 535 aa23.22■■□□□ 1.31
SMC4-222ENST00000490207 COL6A1P12109 1028 aa23.21■■□□□ 1.31
SMC4-222ENST00000490207 SLC16A2P36021 539 aa23.21■■□□□ 1.31
SMC4-222ENST00000490207 TKFCQ3LXA3 575 aa23.21■■□□□ 1.31
SMC4-222ENST00000490207 ANO1Q5XXA6 986 aa23.21■■□□□ 1.31
SMC4-222ENST00000490207 DGKHQ86XP1 1220 aa23.21■■□□□ 1.31
SMC4-222ENST00000490207 MSL3Q8N5Y2 521 aaKnown RBP23.21■■□□□ 1.31
SMC4-222ENST00000490207 RANBP17Q9H2T7 1088 aaKnown RBP23.21■■□□□ 1.31
SMC4-222ENST00000490207 CNNM2Q9H8M5 875 aa23.21■■□□□ 1.31
SMC4-222ENST00000490207 GPCPD1Q9NPB8 672 aa23.21■■□□□ 1.31
SMC4-222ENST00000490207 LCTP09848 1927 aa23.2■■□□□ 1.3
SMC4-222ENST00000490207 LRRC37A2A6NM11 1700 aa23.2■■□□□ 1.3
SMC4-222ENST00000490207 SYNGAP1Q96PV0 1343 aa23.2■■□□□ 1.3
SMC4-222ENST00000490207 SGSM2O43147 1006 aa23.2■■□□□ 1.3
SMC4-222ENST00000490207 ALAS1P13196 640 aa23.2■■□□□ 1.3
SMC4-222ENST00000490207 CCPG1Q9ULG6 757 aa23.2■■□□□ 1.3
SMC4-222ENST00000490207 CEP290O15078 2479 aa23.2■■□□□ 1.3
SMC4-222ENST00000490207 SNHG28P0DPA3 235 aa23.19■■□□□ 1.3
SMC4-222ENST00000490207 PTH1RQ03431 593 aa23.19■■□□□ 1.3
SMC4-222ENST00000490207 ZNF543Q08ER8 600 aa23.19■■□□□ 1.3
SMC4-222ENST00000490207 ZNF467Q7Z7K2 595 aaPredicted RBP23.19■■□□□ 1.3
SMC4-222ENST00000490207 C7orf61Q8IZ16 206 aa23.19■■□□□ 1.3
SMC4-222ENST00000490207 TRERF1Q96PN7 1200 aa23.19■■□□□ 1.3
SMC4-222ENST00000490207 ZSCAN10Q96SZ4 725 aaPredicted RBP23.19■■□□□ 1.3
SMC4-222ENST00000490207 KAT14Q9H8E8 782 aa23.19■■□□□ 1.3
SMC4-222ENST00000490207 CNPY2Q9Y2B0 182 aa23.19■■□□□ 1.3
SMC4-222ENST00000490207 SMCHD1A6NHR9 2005 aa23.19■■□□□ 1.3
SMC4-222ENST00000490207 TNKSO95271 1327 aa23.18■■□□□ 1.3
SMC4-222ENST00000490207 DNM1LO00429 736 aa23.18■■□□□ 1.3
SMC4-222ENST00000490207 ICAM1P05362 532 aa23.18■■□□□ 1.3
SMC4-222ENST00000490207 MAMDC4Q6UXC1 1216 aa23.18■■□□□ 1.3
SMC4-222ENST00000490207 ENAHQ8N8S7 591 aaPredicted RBP23.18■■□□□ 1.3
SMC4-222ENST00000490207 PNMA1Q8ND90 353 aa23.18■■□□□ 1.3
SMC4-222ENST00000490207 A1CFQ9NQ94 594 aaKnown RBP23.18■■□□□ 1.3
SMC4-222ENST00000490207 ZSWIM5Q9P217 1185 aa23.18■■□□□ 1.3
SMC4-222ENST00000490207 U3KPZ7 1027 aaPredicted RBP23.18■■□□□ 1.3
SMC4-222ENST00000490207 ZNF865P0CJ78 1059 aaPredicted RBP23.17■■□□□ 1.3
SMC4-222ENST00000490207 TAL1P17542 331 aaPredicted RBP23.17■■□□□ 1.3
SMC4-222ENST00000490207 GPATCH4Q5T3I0 446 aaKnown RBP23.17■■□□□ 1.3
SMC4-222ENST00000490207 ARRDC4Q8NCT1 418 aa23.17■■□□□ 1.3
SMC4-222ENST00000490207 ANKS1AQ92625 1134 aa23.17■■□□□ 1.3
SMC4-222ENST00000490207 FGD4Q96M96 766 aa23.17■■□□□ 1.3
SMC4-222ENST00000490207 UBAC1Q9BSL1 405 aa23.17■■□□□ 1.3
SMC4-222ENST00000490207 KBTBD13C9JR72 458 aa23.16■■□□□ 1.3
SMC4-222ENST00000490207 POTEB2H3BUK9 544 aa23.16■■□□□ 1.3
SMC4-222ENST00000490207 CYP21A2P08686 494 aa23.16■■□□□ 1.3
SMC4-222ENST00000490207 AKR1A1P14550 325 aa23.16■■□□□ 1.3
SMC4-222ENST00000490207 MUM1L1Q5H9M0 696 aa23.16■■□□□ 1.3
SMC4-222ENST00000490207 GJC2Q5T442 439 aaPredicted RBP23.16■■□□□ 1.3
SMC4-222ENST00000490207 CHRDL2Q6WN34 429 aa23.16■■□□□ 1.3
SMC4-222ENST00000490207 SENP6Q9GZR1 1112 aaPredicted RBP23.16■■□□□ 1.3
SMC4-222ENST00000490207 COLQQ9Y215 455 aaPredicted RBP23.16■■□□□ 1.3
SMC4-222ENST00000490207 SNAI1O95863 264 aaPredicted RBP23.15■■□□□ 1.3
SMC4-222ENST00000490207 RARBP10826 455 aa23.15■■□□□ 1.3
SMC4-222ENST00000490207 TRDNQ13061 729 aa23.15■■□□□ 1.3
SMC4-222ENST00000490207 HABP4Q5JVS0 413 aaKnown RBP23.15■■□□□ 1.3
SMC4-222ENST00000490207 FAM133AQ8N9E0 248 aa23.15■■□□□ 1.3
SMC4-222ENST00000490207 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.15■■□□□ 1.3
SMC4-222ENST00000490207 ZHX1Q9UKY1 873 aaPredicted RBP23.15■■□□□ 1.3
SMC4-222ENST00000490207 MYH6P13533 1939 aa23.15■■□□□ 1.3
SMC4-222ENST00000490207 MYCNP04198 464 aaPredicted RBP23.14■■□□□ 1.29
SMC4-222ENST00000490207 GOLGA8HP0CJ92 632 aa23.14■■□□□ 1.29
SMC4-222ENST00000490207 CNTN2Q02246 1040 aa23.14■■□□□ 1.29
SMC4-222ENST00000490207 LRRC26Q2I0M4 334 aa23.14■■□□□ 1.29
SMC4-222ENST00000490207 ARMCX2Q7L311 632 aa23.14■■□□□ 1.29
SMC4-222ENST00000490207 SKAP1Q86WV1 359 aa23.14■■□□□ 1.29
SMC4-222ENST00000490207 XPNPEP3Q9NQH7 507 aa23.14■■□□□ 1.29
SMC4-222ENST00000490207 LRRC41Q15345 812 aa23.13■■□□□ 1.29
SMC4-222ENST00000490207 IFIT1BQ5T764 474 aaKnown RBP23.13■■□□□ 1.29
SMC4-222ENST00000490207 NSMFQ6X4W1 530 aa23.13■■□□□ 1.29
SMC4-222ENST00000490207 CYB5R4Q7L1T6 521 aa23.13■■□□□ 1.29
SMC4-222ENST00000490207 LENG1Q96BZ8 264 aaPredicted RBP23.13■■□□□ 1.29
SMC4-222ENST00000490207 PNMA2Q9UL42 364 aa23.13■■□□□ 1.29
SMC4-222ENST00000490207 WDR19Q8NEZ3 1342 aa23.12■■□□□ 1.29
SMC4-222ENST00000490207 ASPRV1Q53RT3 343 aa23.12■■□□□ 1.29
SMC4-222ENST00000490207 RALYLQ86SE5 291 aaKnown RBP23.12■■□□□ 1.29
SMC4-222ENST00000490207 CCDC144CPQ8IYA2 1237 aa23.12■■□□□ 1.29
SMC4-222ENST00000490207 CPVLQ9H3G5 476 aa23.12■■□□□ 1.29
SMC4-222ENST00000490207 CYP39A1Q9NYL5 469 aa23.12■■□□□ 1.29
SMC4-222ENST00000490207 ZMYND8Q9ULU4 1186 aaPredicted RBP23.12■■□□□ 1.29
SMC4-222ENST00000490207 RBM8AQ9Y5S9 174 aaKnown RBP23.12■■□□□ 1.29
SMC4-222ENST00000490207 SOWAHBA6NEL2 793 aa23.11■■□□□ 1.29
SMC4-222ENST00000490207 ACVR2BQ13705 512 aa23.11■■□□□ 1.29
SMC4-222ENST00000490207 SEC23AQ15436 765 aa23.11■■□□□ 1.29
SMC4-222ENST00000490207 BMP2KLQ5H9B9 411 aa23.11■■□□□ 1.29
SMC4-222ENST00000490207 KIAA1211Q6ZU35 1233 aa23.11■■□□□ 1.29
SMC4-222ENST00000490207 MAP4K1Q92918 833 aa23.11■■□□□ 1.29
SMC4-222ENST00000490207 ABHD16BQ9H3Z7 469 aa23.11■■□□□ 1.29
SMC4-222ENST00000490207 FAM184BQ9ULE4 1060 aa23.11■■□□□ 1.29
SMC4-222ENST00000490207 TAF6LQ9Y6J9 622 aa23.11■■□□□ 1.29
SMC4-222ENST00000490207 ASB14A6NK59 587 aa23.1■■□□□ 1.29
SMC4-222ENST00000490207 E7EWF7 191 aa23.1■■□□□ 1.29
SMC4-222ENST00000490207 NFIBO00712 420 aa23.1■■□□□ 1.29
SMC4-222ENST00000490207 PGK1P00558 417 aa23.1■■□□□ 1.29
SMC4-222ENST00000490207 PARP1P09874 1014 aaKnown RBP23.1■■□□□ 1.29
SMC4-222ENST00000490207 ATN1P54259 1190 aaPredicted RBP23.1■■□□□ 1.29
SMC4-222ENST00000490207 RNF180Q86T96 592 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms