RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 TSPY8P0CW00 308 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 BMP3P12645 472 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 CST5P28325 142 aaPredicted RBP18.9■□□□□ 0.62
PLOD3-216ENST00000489927 CCDC144BQ3MJ40 725 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 SLFN13Q68D06 897 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 NEDD1Q8NHV4 660 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 GLT1D1Q96MS3 346 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 NACAP1Q9BZK3 213 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 HOMER2Q9NSB8 354 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 PLIN4Q96Q06 1357 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 ASGR1P07306 291 aa18.89■□□□□ 0.61
PLOD3-216ENST00000489927 PDE4BQ07343 736 aa18.89■□□□□ 0.61
PLOD3-216ENST00000489927 LRRFIP1Q32MZ4 808 aaKnown RBP18.89■□□□□ 0.61
PLOD3-216ENST00000489927 ARMCX2Q7L311 632 aa18.89■□□□□ 0.61
PLOD3-216ENST00000489927 CCDC144CPQ8IYA2 1237 aa18.89■□□□□ 0.61
PLOD3-216ENST00000489927 TBX21Q9UL17 535 aa18.89■□□□□ 0.61
PLOD3-216ENST00000489927 ELP1O95163 1332 aa18.89■□□□□ 0.61
PLOD3-216ENST00000489927 TMEM232C9JQI7 657 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 TIMP1P01033 207 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 FOSL2P15408 326 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 CDK7P50613 346 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 GJA9P57773 515 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 TFAP4Q01664 338 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 PPARAQ07869 468 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 PCSK9Q8NBP7 692 aaKnown RBP18.88■□□□□ 0.61
PLOD3-216ENST00000489927 PI4K2BQ8TCG2 481 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 OTUD7AQ8TE49 926 aaPredicted RBP18.88■□□□□ 0.61
PLOD3-216ENST00000489927 KATNBL1Q9H079 304 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 UPF3AQ9H1J1 476 aaKnown RBP18.88■□□□□ 0.61
PLOD3-216ENST00000489927 SPC25Q9HBM1 224 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 ISY1Q9ULR0 285 aaKnown RBP18.88■□□□□ 0.61
PLOD3-216ENST00000489927 TTC41PQ6P2S7 1318 aa18.88■□□□□ 0.61
PLOD3-216ENST00000489927 TMEM265A0A087WTH1 108 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 ZNF536O15090 1300 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 STAT2P52630 851 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 CNTN2Q02246 1040 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 MROH7Q68CQ1 1323 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 VTI1AQ96AJ9 217 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 CHMP4CQ96CF2 233 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 FSD1Q9BTV5 496 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 NAPBQ9H115 298 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 ACAD9Q9H845 621 aa18.87■□□□□ 0.61
PLOD3-216ENST00000489927 ERC2O15083 957 aa18.86■□□□□ 0.61
PLOD3-216ENST00000489927 SLC3A2P08195 630 aaKnown RBP18.86■□□□□ 0.61
PLOD3-216ENST00000489927 FDX1P10109 184 aa18.86■□□□□ 0.61
PLOD3-216ENST00000489927 GNASQ5JWF2 1037 aa18.86■□□□□ 0.61
PLOD3-216ENST00000489927 ZMYM1Q5SVZ6 1142 aa18.86■□□□□ 0.61
PLOD3-216ENST00000489927 MFSD5Q6N075 450 aa18.86■□□□□ 0.61
PLOD3-216ENST00000489927 FAM133AQ8N9E0 248 aa18.86■□□□□ 0.61
PLOD3-216ENST00000489927 GMCL1Q96IK5 515 aa18.86■□□□□ 0.61
PLOD3-216ENST00000489927 AGBL1Q96MI9 1066 aa18.86■□□□□ 0.61
PLOD3-216ENST00000489927 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.86■□□□□ 0.619e-8■■■□□ 17.9
PLOD3-216ENST00000489927 A1CFQ9NQ94 594 aaKnown RBP18.86■□□□□ 0.61
PLOD3-216ENST00000489927 A0A0U1RQG5 324 aaPredicted RBP18.85■□□□□ 0.61
PLOD3-216ENST00000489927 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.85■□□□□ 0.61
PLOD3-216ENST00000489927 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.85■□□□□ 0.61
PLOD3-216ENST00000489927 ARVCFO00192 962 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 CTAGE5O15320 804 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 MCCP23508 829 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 DNAJB2P25686 324 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 SLC1A4P43007 532 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 IKQ13123 557 aaPredicted RBP18.85■□□□□ 0.61
PLOD3-216ENST00000489927 GRIN2CQ14957 1233 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 C16orf59Q7L2K0 433 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 CHURC1Q8WUH1 139 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 STAG1Q8WVM7 1258 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 RNF146Q9NTX7 359 aa18.85■□□□□ 0.61
PLOD3-216ENST00000489927 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.84■□□□□ 0.61
PLOD3-216ENST00000489927 SOWAHBA6NEL2 793 aa18.84■□□□□ 0.61
PLOD3-216ENST00000489927 FOXP2O15409 715 aa18.84■□□□□ 0.61
PLOD3-216ENST00000489927 FAM160B2Q86V87 743 aa18.84■□□□□ 0.61
PLOD3-216ENST00000489927 FAM126BQ8IXS8 530 aa18.84■□□□□ 0.61
PLOD3-216ENST00000489927 STX8Q9UNK0 236 aa18.84■□□□□ 0.61
PLOD3-216ENST00000489927 PCDHB15Q9Y5E8 787 aa18.84■□□□□ 0.61
PLOD3-216ENST00000489927 MCM3APO60318 1980 aa18.84■□□□□ 0.61
PLOD3-216ENST00000489927 ASTN1O14525 1302 aa18.83■□□□□ 0.61
PLOD3-216ENST00000489927 CSF2RAP15509 400 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 NKX3-2P78367 333 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 BEX3Q00994 111 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 TNFAIP2Q03169 654 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 PPIGQ13427 754 aaKnown RBP eCLIP18.83■□□□□ 0.62e-6■■□□□ 14.2
PLOD3-216ENST00000489927 KCTD1Q719H9 257 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 RASGRP2Q7LDG7 609 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 TRERF1Q96PN7 1200 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 PPP1R12CQ9BZL4 782 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 INCENPQ9NQS7 918 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 IL17RBQ9NRM6 502 aa18.83■□□□□ 0.6
PLOD3-216ENST00000489927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.83■□□□□ 0.6
PLOD3-216ENST00000489927 DDX49Q9Y6V7 483 aaKnown RBP18.83■□□□□ 0.6
PLOD3-216ENST00000489927 TSPY2A6NKD2 308 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 NMT2O60551 498 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 PLA2G6O60733 806 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 ALAS1P13196 640 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 MX1P20591 662 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 SNAP25P60880 206 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 CTDSPL2Q05D32 466 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 TKFCQ3LXA3 575 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 TMEM240Q5SV17 173 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 CCDC174Q6PII3 467 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 CCDC129Q6ZRS4 1044 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms