RNA–Protein interactions for RNA: ENST00000489783.1

SHOC2-206, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 2

Gene SHOC2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-206ENST00000489783 PCDHA11Q9Y5I1 949 aa26.89■■□□□ 1.9
SHOC2-206ENST00000489783 TRANK1O15050 2925 aa26.89■■□□□ 1.89
SHOC2-206ENST00000489783 USP17L12C9JPN9 530 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 USP17L21D6R901 530 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 CXCL17Q6UXB2 119 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 C16orf86Q6ZW13 317 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.88■■□□□ 1.89
SHOC2-206ENST00000489783 WNT8AQ9H1J5 351 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 ATP8A2Q9NTI2 1148 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 MTCH2Q9Y6C9 303 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 SLC4A7Q9Y6M7 1214 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 MYH8P13535 1937 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 ASTN1O14525 1302 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 GRIN2DO15399 1336 aa26.88■■□□□ 1.89
SHOC2-206ENST00000489783 ZNF316A6NFI3 1004 aaPredicted RBP26.87■■□□□ 1.89
SHOC2-206ENST00000489783 GOLIM4O00461 696 aa26.87■■□□□ 1.89
SHOC2-206ENST00000489783 ARMCX2Q7L311 632 aa26.87■■□□□ 1.89
SHOC2-206ENST00000489783 CPXCR1Q8N123 301 aa26.87■■□□□ 1.89
SHOC2-206ENST00000489783 NOC4LQ9BVI4 516 aaKnown RBP26.87■■□□□ 1.89
SHOC2-206ENST00000489783 TRPV6Q9H1D0 765 aa26.87■■□□□ 1.89
SHOC2-206ENST00000489783 EXOC6BQ9Y2D4 811 aa26.87■■□□□ 1.89
SHOC2-206ENST00000489783 MCM3APO60318 1980 aa26.87■■□□□ 1.89
SHOC2-206ENST00000489783 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.86■■□□□ 1.89
SHOC2-206ENST00000489783 TMEM31Q5JXX7 168 aa26.86■■□□□ 1.89
SHOC2-206ENST00000489783 PIEZO1Q92508 2521 aa26.85■■□□□ 1.89
SHOC2-206ENST00000489783 BAZ2AQ9UIF9 1905 aaKnown RBP26.85■■□□□ 1.89
SHOC2-206ENST00000489783 TLL1O43897 1013 aa26.85■■□□□ 1.89
SHOC2-206ENST00000489783 MBD4O95243 580 aa26.85■■□□□ 1.89
SHOC2-206ENST00000489783 POU3F3P20264 500 aaPredicted RBP26.85■■□□□ 1.89
SHOC2-206ENST00000489783 ITGA7Q13683 1181 aa26.85■■□□□ 1.89
SHOC2-206ENST00000489783 KRT40Q6A162 431 aa26.85■■□□□ 1.89
SHOC2-206ENST00000489783 CCDC144CPQ8IYA2 1237 aa26.85■■□□□ 1.89
SHOC2-206ENST00000489783 KHSRPQ92945 711 aaKnown RBP eCLIP26.85■■□□□ 1.892e-6■■□□□ 11.7
SHOC2-206ENST00000489783 DNAJC2Q99543 621 aaKnown RBP26.85■■□□□ 1.89
SHOC2-206ENST00000489783 IL1RAPL2Q9NP60 686 aa26.85■■□□□ 1.89
SHOC2-206ENST00000489783 ATP2A1O14983 1001 aa26.84■■□□□ 1.89
SHOC2-206ENST00000489783 PTGS1P23219 599 aa26.84■■□□□ 1.89
SHOC2-206ENST00000489783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.84■■□□□ 1.89
SHOC2-206ENST00000489783 ANKRD35Q8N283 1001 aa26.84■■□□□ 1.89
SHOC2-206ENST00000489783 CERS4Q9HA82 394 aa26.84■■□□□ 1.89
SHOC2-206ENST00000489783 RAVER2Q9HCJ3 691 aaKnown RBP26.84■■□□□ 1.89
SHOC2-206ENST00000489783 EPOPA6NHQ4 379 aa26.83■■□□□ 1.89
SHOC2-206ENST00000489783 ZBBXA8MT70 800 aa26.83■■□□□ 1.89
SHOC2-206ENST00000489783 ATP2A2P16615 1042 aaKnown RBP26.83■■□□□ 1.89
SHOC2-206ENST00000489783 TNFAIP2Q03169 654 aa26.83■■□□□ 1.89
SHOC2-206ENST00000489783 RPUSD2Q8IZ73 545 aaKnown RBP26.83■■□□□ 1.89
SHOC2-206ENST00000489783 PRPF38AQ8NAV1 312 aaKnown RBP26.83■■□□□ 1.89
SHOC2-206ENST00000489783 SCLYQ96I15 445 aa26.83■■□□□ 1.89
SHOC2-206ENST00000489783 C11orf16Q9NQ32 467 aa26.83■■□□□ 1.89
SHOC2-206ENST00000489783 B4GALT4O60513 344 aa26.82■■□□□ 1.88
SHOC2-206ENST00000489783 CHGBP05060 677 aa26.82■■□□□ 1.88
SHOC2-206ENST00000489783 CNTN2Q02246 1040 aa26.82■■□□□ 1.88
SHOC2-206ENST00000489783 TTLL4Q14679 1199 aa26.82■■□□□ 1.88
SHOC2-206ENST00000489783 ZKSCAN2Q63HK3 967 aa26.82■■□□□ 1.88
SHOC2-206ENST00000489783 NOL8Q76FK4 1167 aaKnown RBP26.82■■□□□ 1.88
SHOC2-206ENST00000489783 AGBL1Q96MI9 1066 aa26.82■■□□□ 1.88
SHOC2-206ENST00000489783 GNEQ9Y223 722 aaKnown RBP26.82■■□□□ 1.88
SHOC2-206ENST00000489783 F5H6K3 240 aa26.81■■□□□ 1.88
SHOC2-206ENST00000489783 ZBED4O75132 1171 aa26.81■■□□□ 1.88
SHOC2-206ENST00000489783 CABYRO75952 493 aa26.81■■□□□ 1.88
SHOC2-206ENST00000489783 NDUFB10O96000 172 aa26.81■■□□□ 1.88
SHOC2-206ENST00000489783 CA3P07451 260 aa26.81■■□□□ 1.88
SHOC2-206ENST00000489783 KLRC3Q07444 240 aa26.81■■□□□ 1.88
SHOC2-206ENST00000489783 CTR9Q6PD62 1173 aa26.81■■□□□ 1.88
SHOC2-206ENST00000489783 MUC6Q6W4X9 2439 aa26.81■■□□□ 1.88
SHOC2-206ENST00000489783 GTPBP6O43824 516 aaPredicted RBP26.8■■□□□ 1.88
SHOC2-206ENST00000489783 ADD2P35612 726 aa26.8■■□□□ 1.88
SHOC2-206ENST00000489783 PSMC6P62333 389 aa26.8■■□□□ 1.88
SHOC2-206ENST00000489783 FSCN1Q16658 493 aaKnown RBP26.8■■□□□ 1.88
SHOC2-206ENST00000489783 TMEM67Q5HYA8 995 aa26.8■■□□□ 1.88
SHOC2-206ENST00000489783 CEP85Q6P2H3 762 aa26.8■■□□□ 1.88
SHOC2-206ENST00000489783 ERC1Q8IUD2 1116 aa26.8■■□□□ 1.88
SHOC2-206ENST00000489783 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.8■■□□□ 1.88
SHOC2-206ENST00000489783 COG5Q9UP83 839 aa26.8■■□□□ 1.88
SHOC2-206ENST00000489783 FAM86C2PA6NEL3 165 aa26.79■■□□□ 1.88
SHOC2-206ENST00000489783 GPR37L1O60883 481 aa26.79■■□□□ 1.88
SHOC2-206ENST00000489783 AMOTL1Q8IY63 956 aa26.79■■□□□ 1.88
SHOC2-206ENST00000489783 KIFC2Q96AC6 838 aa26.79■■□□□ 1.88
SHOC2-206ENST00000489783 SLC38A10Q9HBR0 1119 aa26.79■■□□□ 1.88
SHOC2-206ENST00000489783 DDX49Q9Y6V7 483 aaKnown RBP26.79■■□□□ 1.88
SHOC2-206ENST00000489783 ARHGEF15O94989 841 aa26.78■■□□□ 1.88
SHOC2-206ENST00000489783 TLK2Q86UE8 772 aa26.78■■□□□ 1.88
SHOC2-206ENST00000489783 CHST13Q8NET6 341 aa26.78■■□□□ 1.88
SHOC2-206ENST00000489783 RHPN1Q8TCX5 695 aa26.78■■□□□ 1.88
SHOC2-206ENST00000489783 NYAP2Q9P242 653 aa26.78■■□□□ 1.88
SHOC2-206ENST00000489783 FBXO40Q9UH90 709 aa26.78■■□□□ 1.88
SHOC2-206ENST00000489783 CTDP1Q9Y5B0 961 aaPredicted RBP26.78■■□□□ 1.88
SHOC2-206ENST00000489783 ZBED9Q6R2W3 1325 aa26.77■■□□□ 1.88
SHOC2-206ENST00000489783 DYNC1LI2O43237 492 aaPredicted RBP26.77■■□□□ 1.88
SHOC2-206ENST00000489783 SLC4A4Q9Y6R1 1079 aa26.77■■□□□ 1.88
SHOC2-206ENST00000489783 SOWAHBA6NEL2 793 aa26.76■■□□□ 1.87
SHOC2-206ENST00000489783 RLBP1P12271 317 aa26.76■■□□□ 1.87
SHOC2-206ENST00000489783 SMPD1P17405 629 aa26.76■■□□□ 1.87
SHOC2-206ENST00000489783 RASA1P20936 1047 aa26.76■■□□□ 1.87
SHOC2-206ENST00000489783 TMEM63BQ5T3F8 832 aa26.76■■□□□ 1.87
SHOC2-206ENST00000489783 ITPRIPQ8IWB1 547 aa26.76■■□□□ 1.87
SHOC2-206ENST00000489783 FAM133AQ8N9E0 248 aa26.76■■□□□ 1.87
SHOC2-206ENST00000489783 HLA-CQ95604 372 aa26.76■■□□□ 1.87
SHOC2-206ENST00000489783 HOMER2Q9NSB8 354 aa26.76■■□□□ 1.87
SHOC2-206ENST00000489783 DEFB128Q7Z7B8 93 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms