RNA–Protein interactions for RNA: ENST00000489585.5

LYST-211, Transcript of lysosomal trafficking regulator, humanhuman

TSL 1 (best)

Gene LYST, Length 7,069 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-211ENST00000489585 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 RPSAP08865 295 aaKnown RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 CLTAP09496 248 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 FOSL2P15408 326 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 PTGS1P23219 599 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 HNRNPH1P31943 449 aaKnown RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 HNRNPMP52272 730 aaKnown RBP eCLIP4.75□□□□□ -1.65
LYST-211ENST00000489585 IQCB1Q15051 598 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 HORMAD1Q86X24 394 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 GIPC2Q8TF65 315 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 HNRNPLLQ8WVV9 542 aaKnown RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 ZKSCAN4Q969J2 545 aaPredicted RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 CNBD2Q96M20 576 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 TRIM6Q9C030 488 aaPredicted RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 RAD21L1Q9H4I0 556 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 ACTR5Q9H9F9 607 aaPredicted RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 PPANQ9NQ55 473 aaKnown RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 SNX5Q9Y5X3 404 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 RIMBP3Q9UFD9 1639 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 IL16Q14005 1332 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 TROQ12816 1431 aaPredicted RBP4.75□□□□□ -1.65
LYST-211ENST00000489585 RIMBP3CA6NJZ7 1639 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 RIMBP3BA6NNM3 1639 aa4.75□□□□□ -1.65
LYST-211ENST00000489585 RGS16O15492 202 aaPredicted RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 GPC4O75487 556 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ECE1P42892 770 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 LRMPQ12912 555 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 BRD3Q15059 726 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ARMCX6Q7L4S7 300 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 UBE3BQ7Z3V4 1068 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ADCK1Q86TW2 530 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 COQ7Q99807 217 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 CAPS2Q9BXY5 557 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ELP1O95163 1332 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 OVOS2A0A0G2JMS6 1433 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 OVOS2A0A0J9YW53 1432 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 OVOS2Q6IE36 1432 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 RIMS2Q9UQ26 1411 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 SPOPO43791 374 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ESRRBO95718 433 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 MAN1A1P33908 653 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 SERPINB10P48595 397 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 TBCCQ15814 346 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ANO6Q4KMQ2 910 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ACBD5Q5T8D3 534 aaPredicted RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 CC2D1AQ6P1N0 951 aaPredicted RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 TRAF7Q6Q0C0 670 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 NECAB1Q8N987 351 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 TDRD7Q8NHU6 1098 aaKnown RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 RRP36Q96EU6 259 aaKnown RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 MAF1Q9H063 256 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 CDV3Q9UKY7 258 aaKnown RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 NPATQ14207 1427 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ANKARQ7Z5J8 1434 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ST20-MTHFSA0A0A6YYL1 179 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 RASGRF2O14827 1237 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 SERPINB2P05120 415 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 NCAPH2Q6IBW4 605 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 TBC1D9Q6ZT07 1266 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 RBM12BQ8IXT5 1001 aaKnown RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 NSMCE1Q8WV22 266 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 SH3GL1Q99961 368 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 HELLSQ9NRZ9 838 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 NRBP1Q9UHY1 535 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 TBC1D30Q9Y2I9 924 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ASXL2Q76L83 1435 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 A6NHS1 94 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 SYKP43405 635 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 AARSP49588 968 aaKnown RBP eCLIP4.74□□□□□ -1.65
LYST-211ENST00000489585 DAB2P98082 770 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 KRT71Q3SY84 523 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 SND1Q7KZF4 910 aaKnown RBP eCLIP4.74□□□□□ -1.65
LYST-211ENST00000489585 TRIM42Q8IWZ5 723 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 TEX12Q9BXU0 123 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ASIC3Q9UHC3 531 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ZNF229Q9UJW7 825 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 GRK2P25098 689 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 UBXN1Q04323 297 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 FAM69CQ0P6D2 419 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ELF2Q15723 593 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 FAM133BQ5BKY9 247 aaKnown RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 PLEKHM3Q6ZWE6 761 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 PODNQ7Z5L7 613 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 CRACR2BQ8N4Y2 399 aaPredicted RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 CCDC197Q8NCU1 140 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 PIP4K2CQ8TBX8 421 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 MRPS27Q92552 414 aaKnown RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 PPWD1Q96BP3 646 aaKnown RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 SUCLA2Q9P2R7 463 aaPredicted RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 AMOTL2Q9Y2J4 779 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 TRAF5O00463 557 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 ZNF263O14978 683 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 SUN1O94901 812 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 HCLS1P14317 486 aaPredicted RBP4.74□□□□□ -1.65
LYST-211ENST00000489585 KIF11P52732 1056 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 TRAF1Q13077 416 aa4.74□□□□□ -1.65
LYST-211ENST00000489585 NDUFA5Q16718 116 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms