RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SUGCTQ9HAC7 445 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 TRPC6Q9Y210 931 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 CACNA1HO95180 2353 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 EPG5Q9HCE0 2579 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 PARP14Q460N5 1801 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 SOWAHBA6NEL2 793 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 SEPT2Q15019 361 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 PI16Q6UXB8 463 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 MAMDC4Q6UXC1 1216 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 TRIM67Q6ZTA4 783 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 RNF135Q8IUD6 432 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 FBXL6Q8N531 539 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 RETREG2Q8NC44 543 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 USP44Q9H0E7 712 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 AP5M1Q9H0R1 490 aa14.1□□□□□ -0.15
HDAC6-233ENST00000489352 PTPROQ16827 1216 aa14.09□□□□□ -0.15
HDAC6-233ENST00000489352 NBPF20Q3BBV1 942 aa14.09□□□□□ -0.15
HDAC6-233ENST00000489352 SPICE1Q8N0Z3 855 aa14.09□□□□□ -0.15
HDAC6-233ENST00000489352 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-233ENST00000489352 PLXNA3P51805 1871 aa14.09□□□□□ -0.15
HDAC6-233ENST00000489352 MYH8P13535 1937 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 PTPRSQ13332 1948 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 LCHNA4D1U4 455 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 H0Y858 1186 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 BAIAP3O94812 1187 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 TNFAIP2Q03169 654 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 VWCEQ96DN2 955 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 EHD4Q9H223 541 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 SH2D4AQ9H788 454 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 ARHGEF10LQ9HCE6 1279 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 TLR9Q9NR96 1032 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 WDR87Q6ZQQ6 2873 aa14.08□□□□□ -0.16
HDAC6-233ENST00000489352 A0A1W2PRG0 241 aa14.07□□□□□ -0.16
HDAC6-233ENST00000489352 ADCY6O43306 1168 aa14.07□□□□□ -0.16
HDAC6-233ENST00000489352 CYP2C9P11712 490 aa14.07□□□□□ -0.16
HDAC6-233ENST00000489352 SLC4A3P48751 1232 aa14.07□□□□□ -0.16
HDAC6-233ENST00000489352 ERVK-21P61565 698 aa14.07□□□□□ -0.16
HDAC6-233ENST00000489352 FSCN1Q16658 493 aaKnown RBP14.07□□□□□ -0.16
HDAC6-233ENST00000489352 ASCL5Q7RTU5 278 aa14.07□□□□□ -0.16
HDAC6-233ENST00000489352 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
HDAC6-233ENST00000489352 PABPC5Q96DU9 382 aaKnown RBP14.07□□□□□ -0.16
HDAC6-233ENST00000489352 ALDH8A1Q9H2A2 487 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-233ENST00000489352 PA2G4Q9UQ80 394 aaKnown RBP14.07□□□□□ -0.16
HDAC6-233ENST00000489352 BAHCC1Q9P281 2608 aa14.07□□□□□ -0.16
HDAC6-233ENST00000489352 KMT2BQ9UMN6 2715 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-233ENST00000489352 TRIP12Q14669 1992 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-233ENST00000489352 KDM4AO75164 1064 aa14.06□□□□□ -0.16
HDAC6-233ENST00000489352 GUCY1A2P33402 732 aa14.06□□□□□ -0.16
HDAC6-233ENST00000489352 PSMC6P62333 389 aa14.06□□□□□ -0.16
HDAC6-233ENST00000489352 TIGD5Q53EQ6 642 aa14.06□□□□□ -0.16
HDAC6-233ENST00000489352 ZNF467Q7Z7K2 595 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-233ENST00000489352 TLK2Q86UE8 772 aa14.06□□□□□ -0.16
HDAC6-233ENST00000489352 MRPL38Q96DV4 380 aaKnown RBP14.06□□□□□ -0.16
HDAC6-233ENST00000489352 RAD9AQ99638 391 aa14.06□□□□□ -0.16
HDAC6-233ENST00000489352 CLDND1Q9NY35 253 aa14.06□□□□□ -0.16
HDAC6-233ENST00000489352 MYO5AQ9Y4I1 1855 aaKnown RBP14.06□□□□□ -0.16
HDAC6-233ENST00000489352 TET1Q8NFU7 2136 aa14.05□□□□□ -0.16
HDAC6-233ENST00000489352 PRR23AA6NEV1 266 aa14.05□□□□□ -0.16
HDAC6-233ENST00000489352 PROB1E7EW31 1015 aa14.05□□□□□ -0.16
HDAC6-233ENST00000489352 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
HDAC6-233ENST00000489352 CTAGE5O15320 804 aa14.05□□□□□ -0.16
HDAC6-233ENST00000489352 UQCRFS1P1P0C7P4 283 aa14.05□□□□□ -0.16
HDAC6-233ENST00000489352 FSD1Q9BTV5 496 aa14.05□□□□□ -0.16
HDAC6-233ENST00000489352 TRMT13Q9NUP7 481 aaKnown RBP14.05□□□□□ -0.16
HDAC6-233ENST00000489352 CTDP1Q9Y5B0 961 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-233ENST00000489352 GRIN2DO15399 1336 aa14.05□□□□□ -0.16
HDAC6-233ENST00000489352 TNKSO95271 1327 aa14.05□□□□□ -0.16
HDAC6-233ENST00000489352 DMDP11532 3685 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 TANC1Q9C0D5 1861 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 STXBP3O00186 592 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 VWA5AO00534 786 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 DYNC1LI2O43237 492 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-233ENST00000489352 RAD21O60216 631 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 POLR3DP05423 398 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-233ENST00000489352 IQCF3P0C7M6 154 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 UBTFL1P0CB47 393 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-233ENST00000489352 SHMT1P34896 483 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 DYNLL1P63167 89 aaKnown RBP14.04□□□□□ -0.16
HDAC6-233ENST00000489352 NKX3-2P78367 333 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 TFCP2Q12800 502 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 ARMCX2Q7L311 632 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 TMCO2Q7Z6W1 182 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-233ENST00000489352 ADGRA1Q86SQ6 560 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 CERS3Q8IU89 383 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 ANKRD35Q8N283 1001 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 BANK1Q8NDB2 785 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 HDAC5Q9UQL6 1122 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 COL4A6Q14031 1691 aa14.04□□□□□ -0.16
HDAC6-233ENST00000489352 LINC01553A4QN01 128 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 NCK2O43639 380 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 RGS20O76081 388 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 ARID4AP29374 1257 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-233ENST00000489352 AVPR2P30518 371 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 MCAMP43121 646 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 WDR5P61964 334 aaKnown RBP14.03□□□□□ -0.16
HDAC6-233ENST00000489352 BFSP2Q13515 415 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 SMAD2Q15796 467 aaKnown RBP14.03□□□□□ -0.16
HDAC6-233ENST00000489352 FAM47CQ5HY64 1035 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 KIAA1755Q5JYT7 1200 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 SNRNP48Q6IEG0 339 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms