RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RANBP2P49792 3224 aaKnown RBP29.4■■■□□ 2.3
HMGN1-217ENST00000489072 TAL1P17542 331 aaPredicted RBP29.4■■■□□ 2.3
HMGN1-217ENST00000489072 PTH1RQ03431 593 aa29.4■■■□□ 2.3
HMGN1-217ENST00000489072 ANKRD35Q8N283 1001 aa29.4■■■□□ 2.3
HMGN1-217ENST00000489072 RUFY2Q8WXA3 655 aa29.4■■■□□ 2.3
HMGN1-217ENST00000489072 FGD4Q96M96 766 aa29.4■■■□□ 2.3
HMGN1-217ENST00000489072 GPCPD1Q9NPB8 672 aa29.4■■■□□ 2.3
HMGN1-217ENST00000489072 NT5C2P49902 561 aa29.39■■■□□ 2.3
HMGN1-217ENST00000489072 DGKHQ86XP1 1220 aa29.39■■■□□ 2.3
HMGN1-217ENST00000489072 RNF146Q9NTX7 359 aa29.39■■■□□ 2.3
HMGN1-217ENST00000489072 NRBP1Q9UHY1 535 aa29.39■■■□□ 2.3
HMGN1-217ENST00000489072 SNHG28P0DPA3 235 aa29.38■■■□□ 2.29
HMGN1-217ENST00000489072 SYDE2Q5VT97 1194 aa29.38■■■□□ 2.29
HMGN1-217ENST00000489072 RANBP17Q9H2T7 1088 aaKnown RBP29.38■■■□□ 2.29
HMGN1-217ENST00000489072 ACAD9Q9H845 621 aa29.38■■■□□ 2.29
HMGN1-217ENST00000489072 ZSWIM5Q9P217 1185 aa29.38■■■□□ 2.29
HMGN1-217ENST00000489072 COLQQ9Y215 455 aaPredicted RBP29.38■■■□□ 2.29
HMGN1-217ENST00000489072 SGSM2O43147 1006 aa29.37■■■□□ 2.29
HMGN1-217ENST00000489072 ALAS1P13196 640 aa29.37■■■□□ 2.29
HMGN1-217ENST00000489072 ZNF543Q08ER8 600 aa29.37■■■□□ 2.29
HMGN1-217ENST00000489072 TKFCQ3LXA3 575 aa29.37■■■□□ 2.29
HMGN1-217ENST00000489072 SKAP1Q86WV1 359 aa29.37■■■□□ 2.29
HMGN1-217ENST00000489072 IQCA1Q86XH1 822 aa29.37■■■□□ 2.29
HMGN1-217ENST00000489072 ZNF865P0CJ78 1059 aaPredicted RBP29.36■■■□□ 2.29
HMGN1-217ENST00000489072 HABP4Q5JVS0 413 aaKnown RBP29.36■■■□□ 2.29
HMGN1-217ENST00000489072 MAMDC4Q6UXC1 1216 aa29.36■■■□□ 2.29
HMGN1-217ENST00000489072 MSL3Q8N5Y2 521 aaKnown RBP29.36■■■□□ 2.29
HMGN1-217ENST00000489072 ANKS1AQ92625 1134 aa29.36■■■□□ 2.29
HMGN1-217ENST00000489072 TRERF1Q96PN7 1200 aa29.36■■■□□ 2.29
HMGN1-217ENST00000489072 ZSCAN10Q96SZ4 725 aaPredicted RBP29.36■■■□□ 2.29
HMGN1-217ENST00000489072 KRT23Q9C075 422 aa29.36■■■□□ 2.29
HMGN1-217ENST00000489072 A1CFQ9NQ94 594 aaKnown RBP29.36■■■□□ 2.29
HMGN1-217ENST00000489072 SYNGAP1Q96PV0 1343 aa29.36■■■□□ 2.29
HMGN1-217ENST00000489072 SNAI1O95863 264 aaPredicted RBP29.35■■■□□ 2.29
HMGN1-217ENST00000489072 CNTN2Q02246 1040 aa29.35■■■□□ 2.29
HMGN1-217ENST00000489072 CCDC178Q5BJE1 867 aa29.35■■■□□ 2.29
HMGN1-217ENST00000489072 MUM1L1Q5H9M0 696 aa29.35■■■□□ 2.29
HMGN1-217ENST00000489072 GJC2Q5T442 439 aaPredicted RBP29.35■■■□□ 2.29
HMGN1-217ENST00000489072 CENPQQ7L2Z9 268 aaPredicted RBP29.35■■■□□ 2.29
HMGN1-217ENST00000489072 ZNF467Q7Z7K2 595 aaPredicted RBP29.35■■■□□ 2.29
HMGN1-217ENST00000489072 C7orf61Q8IZ16 206 aa29.35■■■□□ 2.29
HMGN1-217ENST00000489072 ENAHQ8N8S7 591 aaPredicted RBP29.35■■■□□ 2.29
HMGN1-217ENST00000489072 CNNM2Q9H8M5 875 aa29.35■■■□□ 2.29
HMGN1-217ENST00000489072 CCPG1Q9ULG6 757 aa29.35■■■□□ 2.29
HMGN1-217ENST00000489072 LCTP09848 1927 aa29.34■■■□□ 2.29
HMGN1-217ENST00000489072 DNM1LO00429 736 aa29.34■■■□□ 2.29
HMGN1-217ENST00000489072 ICAM1P05362 532 aa29.34■■■□□ 2.29
HMGN1-217ENST00000489072 CHRDL2Q6WN34 429 aa29.34■■■□□ 2.29
HMGN1-217ENST00000489072 PNMA1Q8ND90 353 aa29.34■■■□□ 2.29
HMGN1-217ENST00000489072 CYP21A2P08686 494 aa29.33■■■□□ 2.29
HMGN1-217ENST00000489072 LRRC26Q2I0M4 334 aa29.33■■■□□ 2.29
HMGN1-217ENST00000489072 FAM133AQ8N9E0 248 aa29.33■■■□□ 2.29
HMGN1-217ENST00000489072 SENP6Q9GZR1 1112 aaPredicted RBP29.33■■■□□ 2.29
HMGN1-217ENST00000489072 CNPY2Q9Y2B0 182 aa29.33■■■□□ 2.29
HMGN1-217ENST00000489072 TAF6LQ9Y6J9 622 aa29.33■■■□□ 2.29
HMGN1-217ENST00000489072 TNKSO95271 1327 aa29.33■■■□□ 2.29
HMGN1-217ENST00000489072 GOLGA8HP0CJ92 632 aa29.32■■■□□ 2.28
HMGN1-217ENST00000489072 CYB5R4Q7L1T6 521 aa29.32■■■□□ 2.28
HMGN1-217ENST00000489072 ARRDC4Q8NCT1 418 aa29.32■■■□□ 2.28
HMGN1-217ENST00000489072 KAT14Q9H8E8 782 aa29.32■■■□□ 2.28
HMGN1-217ENST00000489072 U3KPZ7 1027 aaPredicted RBP29.32■■■□□ 2.28
HMGN1-217ENST00000489072 POTEB2H3BUK9 544 aa29.31■■■□□ 2.28
HMGN1-217ENST00000489072 LRRC41Q15345 812 aa29.31■■■□□ 2.28
HMGN1-217ENST00000489072 LENG1Q96BZ8 264 aaPredicted RBP29.31■■■□□ 2.28
HMGN1-217ENST00000489072 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.31■■■□□ 2.28
HMGN1-217ENST00000489072 SOWAHBA6NEL2 793 aa29.3■■■□□ 2.28
HMGN1-217ENST00000489072 RARBP10826 455 aa29.3■■■□□ 2.28
HMGN1-217ENST00000489072 GPATCH4Q5T3I0 446 aaKnown RBP29.3■■■□□ 2.28
HMGN1-217ENST00000489072 ARMCX2Q7L311 632 aa29.3■■■□□ 2.28
HMGN1-217ENST00000489072 CPVLQ9H3G5 476 aa29.3■■■□□ 2.28
HMGN1-217ENST00000489072 ZHX1Q9UKY1 873 aaPredicted RBP29.3■■■□□ 2.28
HMGN1-217ENST00000489072 ZMYND8Q9ULU4 1186 aaPredicted RBP29.3■■■□□ 2.28
HMGN1-217ENST00000489072 MYCNP04198 464 aaPredicted RBP29.29■■■□□ 2.28
HMGN1-217ENST00000489072 AKR1A1P14550 325 aa29.29■■■□□ 2.28
HMGN1-217ENST00000489072 UBAC1Q9BSL1 405 aa29.29■■■□□ 2.28
HMGN1-217ENST00000489072 PRO3102Q9H379 93 aa29.29■■■□□ 2.28
HMGN1-217ENST00000489072 XPNPEP3Q9NQH7 507 aa29.29■■■□□ 2.28
HMGN1-217ENST00000489072 CYP39A1Q9NYL5 469 aa29.29■■■□□ 2.28
HMGN1-217ENST00000489072 ASTN1O14525 1302 aa29.28■■■□□ 2.28
HMGN1-217ENST00000489072 KBTBD13C9JR72 458 aa29.28■■■□□ 2.28
HMGN1-217ENST00000489072 SEC23AQ15436 765 aa29.28■■■□□ 2.28
HMGN1-217ENST00000489072 CCDC144CPQ8IYA2 1237 aa29.28■■■□□ 2.28
HMGN1-217ENST00000489072 MAP4K1Q92918 833 aa29.28■■■□□ 2.28
HMGN1-217ENST00000489072 UBA5Q9GZZ9 404 aa29.28■■■□□ 2.28
HMGN1-217ENST00000489072 PGK1P00558 417 aa29.27■■■□□ 2.28
HMGN1-217ENST00000489072 ATN1P54259 1190 aaPredicted RBP29.27■■■□□ 2.28
HMGN1-217ENST00000489072 ACVR2BQ13705 512 aa29.27■■■□□ 2.28
HMGN1-217ENST00000489072 NSMFQ6X4W1 530 aa29.27■■■□□ 2.28
HMGN1-217ENST00000489072 STOX1Q6ZVD7 989 aa29.27■■■□□ 2.28
HMGN1-217ENST00000489072 KATNBL1Q9H079 304 aa29.27■■■□□ 2.28
HMGN1-217ENST00000489072 RBM27Q9P2N5 1060 aaKnown RBP29.27■■■□□ 2.28
HMGN1-217ENST00000489072 LRRC37A2A6NM11 1700 aa29.27■■■□□ 2.28
HMGN1-217ENST00000489072 NFIBO00712 420 aa29.26■■■□□ 2.27
HMGN1-217ENST00000489072 SLC34A2O95436 690 aa29.26■■■□□ 2.27
HMGN1-217ENST00000489072 SYN1P17600 705 aa29.26■■■□□ 2.27
HMGN1-217ENST00000489072 PURBQ96QR8 312 aaKnown RBP29.26■■■□□ 2.27
HMGN1-217ENST00000489072 ABHD16BQ9H3Z7 469 aa29.26■■■□□ 2.27
HMGN1-217ENST00000489072 PCDH10Q9P2E7 1040 aa29.26■■■□□ 2.27
HMGN1-217ENST00000489072 FAM184BQ9ULE4 1060 aa29.26■■■□□ 2.27
HMGN1-217ENST00000489072 RBM8AQ9Y5S9 174 aaKnown RBP29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms