RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 ASTN1O14525 1302 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 SYNGAP1Q96PV0 1343 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 MOXD2PA6NHM9 499 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 F5H6K3 240 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 DUSP11O75319 330 aaKnown RBP13.68□□□□□ -0.22
USP11-210ENST00000489030 C6orf222P0C671 652 aaPredicted RBP13.68□□□□□ -0.22
USP11-210ENST00000489030 CYP2C18P33260 490 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 BEX3Q00994 111 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 CNTN2Q02246 1040 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 KLRC3Q07444 240 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 ACVR2BQ13705 512 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 UBE3CQ15386 1083 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 CCDC144BQ3MJ40 725 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 TMEM63BQ5T3F8 832 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 FAM126BQ8IXS8 530 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 CHMP4CQ96CF2 233 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 UPF3AQ9H1J1 476 aaKnown RBP13.68□□□□□ -0.22
USP11-210ENST00000489030 EPB41L4AQ9HCS5 686 aaPredicted RBP13.68□□□□□ -0.22
USP11-210ENST00000489030 YBX2Q9Y2T7 364 aaKnown RBP13.68□□□□□ -0.22
USP11-210ENST00000489030 NCOR1O75376 2440 aa13.68□□□□□ -0.22
USP11-210ENST00000489030 TTC41PQ6P2S7 1318 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 IGKV6D-41A0A0C4DH26 115 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 GSG1L2A8MUP6 293 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 ERC2O15083 957 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 PRDM1O75626 825 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 MX1P20591 662 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 COL9A1P20849 921 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 CST5P28325 142 aaPredicted RBP13.67□□□□□ -0.22
USP11-210ENST00000489030 CCDC85BQ15834 202 aaPredicted RBP13.67□□□□□ -0.22
USP11-210ENST00000489030 TSHZ3Q63HK5 1081 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 ARMCX2Q7L311 632 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 NUP133Q8WUM0 1156 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 KIFC2Q96AC6 838 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 VWCEQ96DN2 955 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 DDX11Q96FC9 970 aa13.67□□□□□ -0.22
USP11-210ENST00000489030 STRBPQ96SI9 672 aaKnown RBP13.67□□□□□ -0.22
USP11-210ENST00000489030 GRIN2DO15399 1336 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 ARVCFO00192 962 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 TNFRSF10AO00220 468 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 GJA9P57773 515 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 CCDC129Q6ZRS4 1044 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 LRRC47Q8N1G4 583 aaKnown RBP13.66□□□□□ -0.22
USP11-210ENST00000489030 MSL3Q8N5Y2 521 aaKnown RBP13.66□□□□□ -0.22
USP11-210ENST00000489030 OSBP2Q969R2 916 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 VTI1AQ96AJ9 217 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 OSBPL3Q9H4L5 887 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 HOMER2Q9NSB8 354 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 ECHDC1Q9NTX5 307 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 NYAP2Q9P242 653 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 CLIP2Q9UDT6 1046 aa13.66□□□□□ -0.22
USP11-210ENST00000489030 ELP1O95163 1332 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 CHD7Q9P2D1 2997 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 A0A0U1RQG5 324 aaPredicted RBP13.65□□□□□ -0.22
USP11-210ENST00000489030 MINDY4BA8MYZ0 360 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 ATP2A1O14983 1001 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 CD4P01730 458 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 MYOGP15173 224 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 PDE4AP27815 886 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 COPB2P35606 906 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 RABGGTBP53611 331 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 PDE1AP54750 535 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 SNAP25P60880 206 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 PPIGQ13427 754 aaKnown RBP eCLIP13.65□□□□□ -0.229e-6■■□□□ 12.8
USP11-210ENST00000489030 GNASQ5JWF2 1037 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 CXCL17Q6UXB2 119 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 RASGRP2Q7LDG7 609 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
USP11-210ENST00000489030 CCDC144CPQ8IYA2 1237 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 SYMPKQ92797 1274 aaKnown RBP13.65□□□□□ -0.22
USP11-210ENST00000489030 GLT1D1Q96MS3 346 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 NECAB3Q96P71 396 aaPredicted RBP13.65□□□□□ -0.22
USP11-210ENST00000489030 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.65□□□□□ -0.22
USP11-210ENST00000489030 SLC38A10Q9HBR0 1119 aa13.65□□□□□ -0.22
USP11-210ENST00000489030 SALL3Q9BXA9 1300 aa13.64□□□□□ -0.23
USP11-210ENST00000489030 SOWAHBA6NEL2 793 aa13.64□□□□□ -0.23
USP11-210ENST00000489030 SBK1Q52WX2 424 aa13.64□□□□□ -0.23
USP11-210ENST00000489030 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
USP11-210ENST00000489030 AMOTL1Q8IY63 956 aa13.64□□□□□ -0.23
USP11-210ENST00000489030 PRPF38AQ8NAV1 312 aaKnown RBP13.64□□□□□ -0.23
USP11-210ENST00000489030 OTUD7AQ8TE49 926 aaPredicted RBP13.64□□□□□ -0.23
USP11-210ENST00000489030 CEP95Q96GE4 821 aa13.64□□□□□ -0.23
USP11-210ENST00000489030 PURBQ96QR8 312 aaKnown RBP13.64□□□□□ -0.23
USP11-210ENST00000489030 PDGFCQ9NRA1 345 aa13.64□□□□□ -0.23
USP11-210ENST00000489030 ARPP21Q9UBL0 812 aaPredicted RBP13.64□□□□□ -0.23
USP11-210ENST00000489030 MYH7P12883 1935 aa13.64□□□□□ -0.23
USP11-210ENST00000489030 ZNF536O15090 1300 aa13.64□□□□□ -0.23
USP11-210ENST00000489030 M0R2C6 588 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 ZBED4O75132 1171 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 IGFBP4P22692 258 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 CCL23P55773 120 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 PSMC6P62333 389 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 ANKRD35Q8N283 1001 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 TMEM199Q8N511 208 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 FAM133AQ8N9E0 248 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 SLC43A3Q8NBI5 491 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 ADAMTS19Q8TE59 1207 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 HERVK_113Q902F9 699 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms