RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 NBPF11Q86T75 865 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 RAB11FIP4Q86YS3 637 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 FANCBQ8NB91 859 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 UPF3BQ9BZI7 483 aaKnown RBP17.67■□□□□ 0.42
FDPS-213ENST00000489003 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 PLXNB2O15031 1838 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 STRNO43815 780 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 CALM1P0DP23 149 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 CALM2P0DP24 149 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 CALM3P0DP25 149 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 FLT3LGP49771 235 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 APOBRQ0VD83 1088 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 USP6NLQ92738 828 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 BRF1Q92994 677 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 BACH2Q9BYV9 841 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 RIOX1Q9H6W3 641 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 PDRG1Q9NUG6 133 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 PTCH2Q9Y6C5 1203 aa17.66■□□□□ 0.42
FDPS-213ENST00000489003 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
FDPS-213ENST00000489003 APOA5Q6Q788 366 aa17.65■□□□□ 0.42
FDPS-213ENST00000489003 CCDC144CPQ8IYA2 1237 aa17.65■□□□□ 0.42
FDPS-213ENST00000489003 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
FDPS-213ENST00000489003 NUDT12Q9BQG2 462 aa17.65■□□□□ 0.42
FDPS-213ENST00000489003 ALDH8A1Q9H2A2 487 aaPredicted RBP17.65■□□□□ 0.42
FDPS-213ENST00000489003 CWC22Q9HCG8 908 aaKnown RBP17.65■□□□□ 0.42
FDPS-213ENST00000489003 SLC15A5A6NIM6 579 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 ZBTB43O43298 467 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 CYTH3O43739 400 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
FDPS-213ENST00000489003 ICAM1P05362 532 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 CYP2B6P20813 491 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 SMARCA1P28370 1054 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 KIF5BP33176 963 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 COPB2P35606 906 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 EVCP57679 992 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 TOB2Q14106 344 aaPredicted RBP17.64■□□□□ 0.41
FDPS-213ENST00000489003 MTMR8Q96EF0 704 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 IVNS1ABPQ9Y6Y0 642 aa17.64■□□□□ 0.41
FDPS-213ENST00000489003 MYH6P13533 1939 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 ALAS1P13196 640 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 TAL1P17542 331 aaPredicted RBP17.63■□□□□ 0.41
FDPS-213ENST00000489003 GNAQP50148 359 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 IRF5Q13568 498 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 GRB14Q14449 540 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 CDC37Q16543 378 aaPredicted RBP17.63■□□□□ 0.41
FDPS-213ENST00000489003 TKFCQ3LXA3 575 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 MICU3Q86XE3 530 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 CMTR1Q8N1G2 835 aaKnown RBP17.63■□□□□ 0.41
FDPS-213ENST00000489003 SRBD1Q8N5C6 995 aaKnown RBP17.63■□□□□ 0.41
FDPS-213ENST00000489003 CHST13Q8NET6 341 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 RAET1EQ8TD07 263 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 TRERF1Q96PN7 1200 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 KIF2CQ99661 725 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 LZTS2Q9BRK4 669 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 LARP6Q9BRS8 491 aaKnown RBP17.63■□□□□ 0.41
FDPS-213ENST00000489003 FAM217BQ9NTX9 383 aaPredicted RBP17.63■□□□□ 0.41
FDPS-213ENST00000489003 CCPG1Q9ULG6 757 aa17.63■□□□□ 0.41
FDPS-213ENST00000489003 COBLO75128 1261 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 PLEKHA8P1O95397 391 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 FCER1AP12319 257 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 RGS2P41220 211 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 RBM25P49756 843 aaKnown RBP17.62■□□□□ 0.41
FDPS-213ENST00000489003 MAP2K5Q13163 448 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 QRICH1Q2TAL8 776 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 TNS4Q8IZW8 715 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 ABRAQ8N0Z2 381 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 PIGSQ96S52 555 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 MMP19Q99542 508 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 RNF146Q9NTX7 359 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 PNMA2Q9UL42 364 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 NAP1L2Q9ULW6 460 aaPredicted RBP17.62■□□□□ 0.41
FDPS-213ENST00000489003 HPS5Q9UPZ3 1129 aa17.62■□□□□ 0.41
FDPS-213ENST00000489003 ADCY3O60266 1144 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 ADORA2AP29274 412 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 PDIA3P30101 505 aaKnown RBP17.61■□□□□ 0.41
FDPS-213ENST00000489003 RCAN1P53805 252 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 MUM1L1Q5H9M0 696 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.61■□□□□ 0.41
FDPS-213ENST00000489003 NPLOC4Q8TAT6 608 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 PXYLP1Q8TE99 480 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 SOCS4Q8WXH5 440 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 SPZ1Q9BXG8 430 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 HOMER2Q9NSB8 354 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 FBXO40Q9UH90 709 aa17.61■□□□□ 0.41
FDPS-213ENST00000489003 GOLGA8AA7E2F4 631 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 GOLGA8BA8MQT2 603 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 ZBTB5O15062 677 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 HOXC6P09630 235 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 XRCC5P13010 732 aaKnown RBP17.6■□□□□ 0.41
FDPS-213ENST00000489003 CDC27P30260 824 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 ADD1P35611 737 aaKnown RBP17.6■□□□□ 0.41
FDPS-213ENST00000489003 NEK4P51957 841 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 KCTD2Q14681 263 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 PPP2R5BQ15173 497 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 RTN1Q16799 776 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 TMTC3Q6ZXV5 915 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 DPP9Q86TI2 863 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 CCDC82Q8N4S0 544 aa17.6■□□□□ 0.41
FDPS-213ENST00000489003 ACAD9Q9H845 621 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms