RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 DAGLBQ8NCG7 672 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 SUPT20HQ8NEM7 779 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 NEDD1Q8NHV4 660 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 TGFBRAP1Q8WUH2 860 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 THAP11Q96EK4 314 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 PRDM9Q9NQV7 894 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 GJB4Q9NTQ9 266 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 IMPACTQ9P2X3 320 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 C10orf71Q711Q0 1435 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 LRRC37AA6NMS7 1700 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 CBFA2T2O43439 604 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 PRDM1O75626 825 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 WDHD1O75717 1129 aaPredicted RBP7.56□□□□□ -1.2
HDLBP-243ENST00000488923 SMC2O95347 1197 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 PLEKHA8P1O95397 391 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 HLA-DOAP06340 250 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 TOP1P11387 765 aaKnown RBP7.56□□□□□ -1.2
HDLBP-243ENST00000488923 SMPD1P17405 629 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 RXRBP28702 533 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 MARCKSP29966 332 aaPredicted RBP7.56□□□□□ -1.2
HDLBP-243ENST00000488923 GUCY1A2P33402 732 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 GSDMDP57764 484 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 DIXDC1Q155Q3 683 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 FAM47AQ5JRC9 791 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 ARL6IP4Q66PJ3 421 aaKnown RBP7.56□□□□□ -1.2
HDLBP-243ENST00000488923 RCSD1Q6JBY9 416 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 HHIPL2Q6UWX4 724 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 KRBA2Q6ZNG9 492 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 CCDC82Q8N4S0 544 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 FAM160A2Q8N612 972 aaPredicted RBP7.56□□□□□ -1.2
HDLBP-243ENST00000488923 PXYLP1Q8TE99 480 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 PIBF1Q8WXW3 757 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 CNKSR1Q969H4 720 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 CCDC17Q96LX7 622 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 SPZ1Q9BXG8 430 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 CABP5Q9NP86 173 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 VPS54Q9P1Q0 977 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 POLLQ9UGP5 575 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 FBXO2Q9UK22 296 aaPredicted RBP7.56□□□□□ -1.2
HDLBP-243ENST00000488923 KCNJ14Q9UNX9 436 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.56□□□□□ -1.2
HDLBP-243ENST00000488923 PLIN4Q96Q06 1357 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 DLEC1Q9Y238 1755 aa7.56□□□□□ -1.2
HDLBP-243ENST00000488923 NRXN2Q9P2S2 1712 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 FLT1P17948 1338 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 H0YIN7 160 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 TPM2P07951 284 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 MMP10P09238 476 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 CYP2D6P10635 497 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 RASA1P20936 1047 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 GNA11P29992 359 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 TXLNAP40222 546 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 NOVP48745 357 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 CDK8P49336 464 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 TOB1P50616 345 aaPredicted RBP7.55□□□□□ -1.2
HDLBP-243ENST00000488923 RHBDL3P58872 404 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 GTF2IP78347 998 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 ASPRV1Q53RT3 343 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 TTC38Q5R3I4 469 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 MORN1Q5T089 497 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 COL23A1Q86Y22 540 aaPredicted RBP7.55□□□□□ -1.2
HDLBP-243ENST00000488923 MAPKAPK5Q8IW41 473 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 NPAS3Q8IXF0 933 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 BLIDQ8IZY5 108 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 SRBD1Q8N5C6 995 aaKnown RBP7.55□□□□□ -1.2
HDLBP-243ENST00000488923 MLKLQ8NB16 471 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 TEKT1Q969V4 418 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 GTPBP4Q9BZE4 634 aaKnown RBP7.55□□□□□ -1.2
HDLBP-243ENST00000488923 EHD4Q9H223 541 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 SEC63Q9UGP8 760 aaKnown RBP7.55□□□□□ -1.2
HDLBP-243ENST00000488923 PCDHA4Q9UN74 947 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 RGPD3A6NKT7 1758 aaPredicted RBP7.55□□□□□ -1.2
HDLBP-243ENST00000488923 RGPD4Q7Z3J3 1758 aa7.55□□□□□ -1.2
HDLBP-243ENST00000488923 PALM3A6NDB9 673 aaPredicted RBP7.54□□□□□ -1.2
HDLBP-243ENST00000488923 WNT7AO00755 349 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 MYL1P05976 194 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 PARP1P09874 1014 aaKnown RBP7.54□□□□□ -1.2
HDLBP-243ENST00000488923 LONP1P36776 959 aaKnown RBP7.54□□□□□ -1.2
HDLBP-243ENST00000488923 ATP2C1P98194 919 aaPredicted RBP7.54□□□□□ -1.2
HDLBP-243ENST00000488923 MYL5Q02045 173 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 NR5A1Q13285 461 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 POSTNQ15063 836 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 ZNF827Q17R98 1081 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 SOGA3Q5TF21 947 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 NT5DC1Q5TFE4 455 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 STRIP1Q5VSL9 837 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 C11orf57Q6ZUT1 292 aaPredicted RBP7.54□□□□□ -1.2
HDLBP-243ENST00000488923 KRT25Q7Z3Z0 450 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 AOPEPQ8N6M6 819 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 IRF7Q92985 503 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 TNFRSF25Q93038 417 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 SMARCE1Q969G3 411 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 RRP36Q96EU6 259 aaKnown RBP7.54□□□□□ -1.2
HDLBP-243ENST00000488923 TMEM47Q9BQJ4 181 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 DHX36Q9H2U1 1008 aaKnown RBP7.54□□□□□ -1.2
HDLBP-243ENST00000488923 C6orf50Q9HD87 102 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 IL17RBQ9NRM6 502 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 BARHL2Q9NY43 387 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 CLIP2Q9UDT6 1046 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 STX8Q9UNK0 236 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms