RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 GMCL1Q96IK5 515 aa21.88■■□□□ 1.09
HDAC6-231ENST00000488905 FAM161BQ96MY7 647 aa21.88■■□□□ 1.09
HDAC6-231ENST00000488905 HOMER2Q9NSB8 354 aa21.88■■□□□ 1.09
HDAC6-231ENST00000488905 MYADML2A6NDP7 307 aa21.87■■□□□ 1.09
HDAC6-231ENST00000488905 TMEM232C9JQI7 657 aa21.87■■□□□ 1.09
HDAC6-231ENST00000488905 KIAA0355O15063 1070 aa21.87■■□□□ 1.09
HDAC6-231ENST00000488905 DUSP11O75319 330 aaKnown RBP21.87■■□□□ 1.09
HDAC6-231ENST00000488905 CST5P28325 142 aaPredicted RBP21.87■■□□□ 1.09
HDAC6-231ENST00000488905 PPP4R3BQ5MIZ7 849 aa21.87■■□□□ 1.09
HDAC6-231ENST00000488905 CCSAPQ6IQ19 270 aaPredicted RBP21.87■■□□□ 1.09
HDAC6-231ENST00000488905 ARMCX2Q7L311 632 aa21.87■■□□□ 1.09
HDAC6-231ENST00000488905 ABHD16BQ9H3Z7 469 aa21.87■■□□□ 1.09
HDAC6-231ENST00000488905 ACAD9Q9H845 621 aa21.87■■□□□ 1.09
HDAC6-231ENST00000488905 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.87■■□□□ 1.09
HDAC6-231ENST00000488905 ADCY6O43306 1168 aa21.86■■□□□ 1.09
HDAC6-231ENST00000488905 SLC1A4P43007 532 aa21.86■■□□□ 1.09
HDAC6-231ENST00000488905 IKQ13123 557 aaPredicted RBP21.86■■□□□ 1.09
HDAC6-231ENST00000488905 KCNA10Q16322 511 aa21.86■■□□□ 1.09
HDAC6-231ENST00000488905 CCDC129Q6ZRS4 1044 aa21.86■■□□□ 1.09
HDAC6-231ENST00000488905 ANKRD33Q7Z3H0 272 aa21.86■■□□□ 1.09
HDAC6-231ENST00000488905 FAM160B2Q86V87 743 aa21.86■■□□□ 1.09
HDAC6-231ENST00000488905 TOX2Q96NM4 488 aa21.86■■□□□ 1.09
HDAC6-231ENST00000488905 TSPY2A6NKD2 308 aa21.85■■□□□ 1.09
HDAC6-231ENST00000488905 RAG1P15918 1043 aa21.85■■□□□ 1.09
HDAC6-231ENST00000488905 RRP1P56182 461 aaKnown RBP21.85■■□□□ 1.09
HDAC6-231ENST00000488905 SMAD3P84022 425 aaKnown RBP21.85■■□□□ 1.09
HDAC6-231ENST00000488905 CTDSPL2Q05D32 466 aa21.85■■□□□ 1.09
HDAC6-231ENST00000488905 CCDC144BQ3MJ40 725 aa21.85■■□□□ 1.09
HDAC6-231ENST00000488905 CHURC1Q8WUH1 139 aa21.85■■□□□ 1.09
HDAC6-231ENST00000488905 UPF3AQ9H1J1 476 aaKnown RBP21.85■■□□□ 1.09
HDAC6-231ENST00000488905 TMEM39AQ9NV64 488 aa21.85■■□□□ 1.09
HDAC6-231ENST00000488905 STX8Q9UNK0 236 aa21.85■■□□□ 1.09
HDAC6-231ENST00000488905 ZNF536O15090 1300 aa21.84■■□□□ 1.09
HDAC6-231ENST00000488905 C6orf222P0C671 652 aaPredicted RBP21.84■■□□□ 1.09
HDAC6-231ENST00000488905 FAAP100Q0VG06 881 aa21.84■■□□□ 1.09
HDAC6-231ENST00000488905 CCDC144CPQ8IYA2 1237 aa21.84■■□□□ 1.09
HDAC6-231ENST00000488905 STAG1Q8WVM7 1258 aa21.84■■□□□ 1.09
HDAC6-231ENST00000488905 KATNBL1Q9H079 304 aa21.84■■□□□ 1.09
HDAC6-231ENST00000488905 A1CFQ9NQ94 594 aaKnown RBP21.84■■□□□ 1.09
HDAC6-231ENST00000488905 RNF146Q9NTX7 359 aa21.84■■□□□ 1.09
HDAC6-231ENST00000488905 MROH7Q68CQ1 1323 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 DCDC2CA8MYV0 355 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 MCCP23508 829 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 EPHB4P54760 987 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 GJA9P57773 515 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 IRX5P78411 483 aaPredicted RBP21.83■■□□□ 1.09
HDAC6-231ENST00000488905 CNTN2Q02246 1040 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 FPGSQ05932 587 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 FAM133AQ8N9E0 248 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 PCSK9Q8NBP7 692 aaKnown RBP21.83■■□□□ 1.09
HDAC6-231ENST00000488905 CHMP4CQ96CF2 233 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 RNPC3Q96LT9 517 aaKnown RBP21.83■■□□□ 1.09
HDAC6-231ENST00000488905 AGBL1Q96MI9 1066 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 GLT1D1Q96MS3 346 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 SPC25Q9HBM1 224 aa21.83■■□□□ 1.09
HDAC6-231ENST00000488905 ZBTB47Q9UFB7 747 aaPredicted RBP21.83■■□□□ 1.09
HDAC6-231ENST00000488905 ELP1O95163 1332 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 NMT2O60551 498 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 PLA2G6O60733 806 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 ASGR1P07306 291 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 TKFCQ3LXA3 575 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 VPS53Q5VIR6 699 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 KCTD1Q719H9 257 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 RASGRP2Q7LDG7 609 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 EVI5LQ96CN4 794 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 IL17RBQ9NRM6 502 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 ANAPC4Q9UJX5 808 aa21.82■■□□□ 1.08
HDAC6-231ENST00000488905 LAMA4Q16363 1823 aa21.81■■□□□ 1.08
HDAC6-231ENST00000488905 TRERF1Q96PN7 1200 aa21.81■■□□□ 1.08
HDAC6-231ENST00000488905 INCENPQ9NQS7 918 aa21.81■■□□□ 1.08
HDAC6-231ENST00000488905 TBX21Q9UL17 535 aa21.81■■□□□ 1.08
HDAC6-231ENST00000488905 SPTBN5Q9NRC6 3674 aaKnown RBP21.81■■□□□ 1.08
HDAC6-231ENST00000488905 RANBP6O60518 1105 aaKnown RBP21.8■■□□□ 1.08
HDAC6-231ENST00000488905 ALAS1P13196 640 aa21.8■■□□□ 1.08
HDAC6-231ENST00000488905 ANKRD45Q5TZF3 282 aa21.8■■□□□ 1.08
HDAC6-231ENST00000488905 RCSD1Q6JBY9 416 aa21.8■■□□□ 1.08
HDAC6-231ENST00000488905 CCDC174Q6PII3 467 aa21.8■■□□□ 1.08
HDAC6-231ENST00000488905 CDX2Q99626 313 aaPredicted RBP21.8■■□□□ 1.08
HDAC6-231ENST00000488905 TTYH1Q9H313 450 aaPredicted RBP21.8■■□□□ 1.08
HDAC6-231ENST00000488905 SEMA6BQ9H3T3 888 aa21.8■■□□□ 1.08
HDAC6-231ENST00000488905 PRR12Q9ULL5 1215 aa21.8■■□□□ 1.08
HDAC6-231ENST00000488905 A0A0U1RQG5 324 aaPredicted RBP21.79■■□□□ 1.08
HDAC6-231ENST00000488905 SOWAHBA6NEL2 793 aa21.79■■□□□ 1.08
HDAC6-231ENST00000488905 ASB14A6NK59 587 aa21.79■■□□□ 1.08
HDAC6-231ENST00000488905 ORC4O43929 436 aa21.79■■□□□ 1.08
HDAC6-231ENST00000488905 NOVP48745 357 aa21.79■■□□□ 1.08
HDAC6-231ENST00000488905 GNASQ5JWF2 1037 aa21.79■■□□□ 1.08
HDAC6-231ENST00000488905 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.79■■□□□ 1.08
HDAC6-231ENST00000488905 CRBNQ96SW2 442 aa21.79■■□□□ 1.08
HDAC6-231ENST00000488905 HELLSQ9NRZ9 838 aa21.79■■□□□ 1.08
HDAC6-231ENST00000488905 ASTN1O14525 1302 aa21.79■■□□□ 1.08
HDAC6-231ENST00000488905 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.78■■□□□ 1.08
HDAC6-231ENST00000488905 CTAGE5O15320 804 aa21.78■■□□□ 1.08
HDAC6-231ENST00000488905 TIMP1P01033 207 aa21.78■■□□□ 1.08
HDAC6-231ENST00000488905 CDK7P50613 346 aa21.78■■□□□ 1.08
HDAC6-231ENST00000488905 PDE1AP54750 535 aa21.78■■□□□ 1.08
HDAC6-231ENST00000488905 SNAP25P60880 206 aa21.78■■□□□ 1.08
HDAC6-231ENST00000488905 NKX3-2P78367 333 aa21.78■■□□□ 1.08
HDAC6-231ENST00000488905 ALX1Q15699 326 aa21.78■■□□□ 1.08
HDAC6-231ENST00000488905 CCDC96Q2M329 555 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms