RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 SMARCC2Q8TAQ2 1214 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 KLRG1Q96E93 195 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 USP28Q96RU2 1077 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 SLC26A6Q9BXS9 759 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 ZNF408Q9H9D4 720 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 NYAP2Q9P242 653 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 GREB1LQ9C091 1923 aaPredicted RBP15.16■□□□□ 0.02
CHD1L-208ENST00000488864 CTAGE5O15320 804 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 SLU7O95391 586 aaKnown RBP15.16■□□□□ 0.02
CHD1L-208ENST00000488864 PDHBP11177 359 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 ENGASEQ8NFI3 743 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 AIFM3Q96NN9 605 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 LLPHQ9BRT6 129 aaKnown RBP15.16■□□□□ 0.02
CHD1L-208ENST00000488864 GJB4Q9NTQ9 266 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 ORC3Q9UBD5 711 aaPredicted RBP15.16■□□□□ 0.02
CHD1L-208ENST00000488864 MAD2L2Q9UI95 211 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 CCDC196A0A1B0GTZ2 297 aa15.15■□□□□ 0.02
CHD1L-208ENST00000488864 CTNND1O60716 968 aaKnown RBP15.15■□□□□ 0.02
CHD1L-208ENST00000488864 USP2O75604 605 aaPredicted RBP15.15■□□□□ 0.02
CHD1L-208ENST00000488864 CPLX2Q6PUV4 134 aaKnown RBP15.15■□□□□ 0.02
CHD1L-208ENST00000488864 SRBD1Q8N5C6 995 aaKnown RBP15.15■□□□□ 0.02
CHD1L-208ENST00000488864 HOOK2Q96ED9 719 aa15.15■□□□□ 0.02
CHD1L-208ENST00000488864 RCAN1P53805 252 aa15.15■□□□□ 0.02
CHD1L-208ENST00000488864 TTLL12Q14166 644 aaPredicted RBP15.15■□□□□ 0.02
CHD1L-208ENST00000488864 KCTD1Q719H9 257 aa15.15■□□□□ 0.02
CHD1L-208ENST00000488864 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
CHD1L-208ENST00000488864 GPCPD1Q9NPB8 672 aa15.15■□□□□ 0.02
CHD1L-208ENST00000488864 ANO10Q9NW15 660 aa15.15■□□□□ 0.02
CHD1L-208ENST00000488864 MYH4Q9Y623 1939 aa15.14■□□□□ 0.02
CHD1L-208ENST00000488864 PARP1P09874 1014 aaKnown RBP15.14■□□□□ 0.01
CHD1L-208ENST00000488864 IFNAR1P17181 557 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 GUCY1B3Q02153 619 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 GRM4Q14833 912 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 UBA5Q9GZZ9 404 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 NID2Q14112 1375 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 MYH15Q9Y2K3 1946 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 F5H6K3 240 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 PPP1R12BO60237 982 aaPredicted RBP15.14■□□□□ 0.01
CHD1L-208ENST00000488864 KIF5BP33176 963 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 KLRC3Q07444 240 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 DGKZQ13574 1117 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 CCDC96Q2M329 555 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 E4F1Q66K89 784 aaPredicted RBP15.14■□□□□ 0.01
CHD1L-208ENST00000488864 OTUD7BQ6GQQ9 843 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 CCDC73Q6ZRK6 1079 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 TMTC3Q6ZXV5 915 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 MKL1Q969V6 931 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 ARHGEF10LQ9HCE6 1279 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 KCND1Q9NSA2 647 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 RBM28Q9NW13 759 aaKnown RBP15.14■□□□□ 0.01
CHD1L-208ENST00000488864 ZNF112Q9UJU3 913 aa15.14■□□□□ 0.01
CHD1L-208ENST00000488864 KLRF2D3W0D1 207 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 KINO60870 393 aaKnown RBP15.13■□□□□ 0.01
CHD1L-208ENST00000488864 CDKL5O76039 1030 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 SSRP1Q08945 709 aaKnown RBP15.13■□□□□ 0.01
CHD1L-208ENST00000488864 SLC35G1Q2M3R5 365 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 ERCC6LQ2NKX8 1250 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 KIAA1755Q5JYT7 1200 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 SLFN13Q68D06 897 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 TTBK2Q6IQ55 1244 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 VAT1LQ9HCJ6 419 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 V9GY48 417 aaPredicted RBP15.13■□□□□ 0.01
CHD1L-208ENST00000488864 PALM3A6NDB9 673 aaPredicted RBP15.13■□□□□ 0.01
CHD1L-208ENST00000488864 ERICH4A6NGS2 130 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 NF2P35240 595 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 SLC1A4P43007 532 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 FAM160A1Q05DH4 1040 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 FUT2Q10981 343 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 SCYL3Q8IZE3 742 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHD1L-208ENST00000488864 PICK1Q9NRD5 415 aa15.13■□□□□ 0.01
CHD1L-208ENST00000488864 CYTH3O43739 400 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 NDUFB10O96000 172 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 SLC16A2P36021 539 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 PPP2R5BQ15173 497 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.12■□□□□ 0.01
CHD1L-208ENST00000488864 PPP1R13BQ96KQ4 1090 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 TMEM51Q9NW97 253 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 FMNL1O95466 1100 aaPredicted RBP15.12■□□□□ 0.01
CHD1L-208ENST00000488864 PTPRAP18433 802 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 ME1P48163 572 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 VGLL4Q14135 290 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 SYT10Q6XYQ8 523 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 LDHDQ86WU2 507 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 TRIM22Q8IYM9 498 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 CEP57L1Q8IYX8 460 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 TMX2Q9Y320 296 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 ZHX2Q9Y6X8 837 aa15.12■□□□□ 0.01
CHD1L-208ENST00000488864 CNTNAP5Q8WYK1 1306 aa15.11■□□□□ 0.01
CHD1L-208ENST00000488864 TRIM75PA6NK02 468 aa15.11■□□□□ 0.01
CHD1L-208ENST00000488864 SNHG28P0DPA3 235 aa15.11■□□□□ 0.01
CHD1L-208ENST00000488864 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
CHD1L-208ENST00000488864 SPP2Q13103 211 aa15.11■□□□□ 0.01
CHD1L-208ENST00000488864 CLMNQ96JQ2 1002 aa15.11■□□□□ 0.01
CHD1L-208ENST00000488864 MAP3K14Q99558 947 aa15.11■□□□□ 0.01
CHD1L-208ENST00000488864 ALG1Q9BT22 464 aa15.11■□□□□ 0.01
CHD1L-208ENST00000488864 L2HGDHQ9H9P8 463 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms