RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TTC14Q96N46 770 aa20.87■□□□□ 0.93
ITGB1-215ENST00000488494 ACAD9Q9H845 621 aa20.87■□□□□ 0.93
ITGB1-215ENST00000488494 GPCPD1Q9NPB8 672 aa20.87■□□□□ 0.93
ITGB1-215ENST00000488494 TAL1P17542 331 aaPredicted RBP20.86■□□□□ 0.93
ITGB1-215ENST00000488494 SYDE2Q5VT97 1194 aa20.86■□□□□ 0.93
ITGB1-215ENST00000488494 IQCA1Q86XH1 822 aa20.86■□□□□ 0.93
ITGB1-215ENST00000488494 NRBP1Q9UHY1 535 aa20.86■□□□□ 0.93
ITGB1-215ENST00000488494 ALAS1P13196 640 aa20.85■□□□□ 0.93
ITGB1-215ENST00000488494 PTH1RQ03431 593 aa20.85■□□□□ 0.93
ITGB1-215ENST00000488494 ZNF543Q08ER8 600 aa20.85■□□□□ 0.93
ITGB1-215ENST00000488494 BTNL9Q6UXG8 535 aa20.85■□□□□ 0.93
ITGB1-215ENST00000488494 CENPQQ7L2Z9 268 aaPredicted RBP20.85■□□□□ 0.93
ITGB1-215ENST00000488494 KRT23Q9C075 422 aa20.85■□□□□ 0.93
ITGB1-215ENST00000488494 RANBP17Q9H2T7 1088 aaKnown RBP20.85■□□□□ 0.93
ITGB1-215ENST00000488494 CNNM2Q9H8M5 875 aa20.85■□□□□ 0.93
ITGB1-215ENST00000488494 CCPG1Q9ULG6 757 aa20.85■□□□□ 0.93
ITGB1-215ENST00000488494 CNPY2Q9Y2B0 182 aa20.85■□□□□ 0.93
ITGB1-215ENST00000488494 TNKSO95271 1327 aa20.84■□□□□ 0.93
ITGB1-215ENST00000488494 SYNGAP1Q96PV0 1343 aa20.84■□□□□ 0.93
ITGB1-215ENST00000488494 DNM1LO00429 736 aa20.84■□□□□ 0.93
ITGB1-215ENST00000488494 SGSM2O43147 1006 aa20.84■□□□□ 0.93
ITGB1-215ENST00000488494 TKFCQ3LXA3 575 aa20.84■□□□□ 0.93
ITGB1-215ENST00000488494 CHRDL2Q6WN34 429 aa20.84■□□□□ 0.93
ITGB1-215ENST00000488494 SKAP1Q86WV1 359 aa20.84■□□□□ 0.93
ITGB1-215ENST00000488494 DGKHQ86XP1 1220 aa20.84■□□□□ 0.93
ITGB1-215ENST00000488494 ENAHQ8N8S7 591 aaPredicted RBP20.84■□□□□ 0.93
ITGB1-215ENST00000488494 FGD4Q96M96 766 aa20.84■□□□□ 0.93
ITGB1-215ENST00000488494 ZSCAN10Q96SZ4 725 aaPredicted RBP20.84■□□□□ 0.93
ITGB1-215ENST00000488494 A1CFQ9NQ94 594 aaKnown RBP20.84■□□□□ 0.93
ITGB1-215ENST00000488494 COLQQ9Y215 455 aaPredicted RBP20.84■□□□□ 0.93
ITGB1-215ENST00000488494 RANBP2P49792 3224 aaKnown RBP20.84■□□□□ 0.93
ITGB1-215ENST00000488494 MYCNP04198 464 aaPredicted RBP20.83■□□□□ 0.93
ITGB1-215ENST00000488494 ICAM1P05362 532 aa20.83■□□□□ 0.93
ITGB1-215ENST00000488494 SNHG28P0DPA3 235 aa20.83■□□□□ 0.93
ITGB1-215ENST00000488494 CCDC178Q5BJE1 867 aa20.83■□□□□ 0.93
ITGB1-215ENST00000488494 GJC2Q5T442 439 aaPredicted RBP20.83■□□□□ 0.93
ITGB1-215ENST00000488494 ZNF467Q7Z7K2 595 aaPredicted RBP20.83■□□□□ 0.93
ITGB1-215ENST00000488494 MSL3Q8N5Y2 521 aaKnown RBP20.83■□□□□ 0.93
ITGB1-215ENST00000488494 PNMA1Q8ND90 353 aa20.83■□□□□ 0.93
ITGB1-215ENST00000488494 LENG1Q96BZ8 264 aaPredicted RBP20.83■□□□□ 0.93
ITGB1-215ENST00000488494 TRERF1Q96PN7 1200 aa20.83■□□□□ 0.93
ITGB1-215ENST00000488494 UBAC1Q9BSL1 405 aa20.83■□□□□ 0.93
ITGB1-215ENST00000488494 KAT14Q9H8E8 782 aa20.83■□□□□ 0.93
ITGB1-215ENST00000488494 ZSWIM5Q9P217 1185 aa20.83■□□□□ 0.93
ITGB1-215ENST00000488494 LRRC37A2A6NM11 1700 aa20.82■□□□□ 0.92
ITGB1-215ENST00000488494 ZNF865P0CJ78 1059 aaPredicted RBP20.82■□□□□ 0.92
ITGB1-215ENST00000488494 CNTN2Q02246 1040 aa20.82■□□□□ 0.92
ITGB1-215ENST00000488494 LRRC26Q2I0M4 334 aa20.82■□□□□ 0.92
ITGB1-215ENST00000488494 MUM1L1Q5H9M0 696 aa20.82■□□□□ 0.92
ITGB1-215ENST00000488494 HABP4Q5JVS0 413 aaKnown RBP20.82■□□□□ 0.92
ITGB1-215ENST00000488494 MAMDC4Q6UXC1 1216 aa20.82■□□□□ 0.92
ITGB1-215ENST00000488494 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
ITGB1-215ENST00000488494 U3KPZ7 1027 aaPredicted RBP20.82■□□□□ 0.92
ITGB1-215ENST00000488494 KBTBD13C9JR72 458 aa20.81■□□□□ 0.92
ITGB1-215ENST00000488494 POTEB2H3BUK9 544 aa20.81■□□□□ 0.92
ITGB1-215ENST00000488494 SNAI1O95863 264 aaPredicted RBP20.81■□□□□ 0.92
ITGB1-215ENST00000488494 CYP21A2P08686 494 aa20.81■□□□□ 0.92
ITGB1-215ENST00000488494 GOLGA8HP0CJ92 632 aa20.81■□□□□ 0.92
ITGB1-215ENST00000488494 RARBP10826 455 aa20.81■□□□□ 0.92
ITGB1-215ENST00000488494 AKR1A1P14550 325 aa20.81■□□□□ 0.92
ITGB1-215ENST00000488494 ARRDC4Q8NCT1 418 aa20.81■□□□□ 0.92
ITGB1-215ENST00000488494 SENP6Q9GZR1 1112 aaPredicted RBP20.81■□□□□ 0.92
ITGB1-215ENST00000488494 XPNPEP3Q9NQH7 507 aa20.81■□□□□ 0.92
ITGB1-215ENST00000488494 ZMYND8Q9ULU4 1186 aaPredicted RBP20.81■□□□□ 0.92
ITGB1-215ENST00000488494 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
ITGB1-215ENST00000488494 ARMCX2Q7L311 632 aa20.8■□□□□ 0.92
ITGB1-215ENST00000488494 FAM133AQ8N9E0 248 aa20.8■□□□□ 0.92
ITGB1-215ENST00000488494 ANKS1AQ92625 1134 aa20.8■□□□□ 0.92
ITGB1-215ENST00000488494 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.8■□□□□ 0.92
ITGB1-215ENST00000488494 TAF6LQ9Y6J9 622 aa20.8■□□□□ 0.92
ITGB1-215ENST00000488494 LCTP09848 1927 aa20.79■□□□□ 0.92
ITGB1-215ENST00000488494 LRRC41Q15345 812 aa20.79■□□□□ 0.92
ITGB1-215ENST00000488494 NSMFQ6X4W1 530 aa20.79■□□□□ 0.92
ITGB1-215ENST00000488494 CYB5R4Q7L1T6 521 aa20.79■□□□□ 0.92
ITGB1-215ENST00000488494 CPVLQ9H3G5 476 aa20.79■□□□□ 0.92
ITGB1-215ENST00000488494 CYP39A1Q9NYL5 469 aa20.79■□□□□ 0.92
ITGB1-215ENST00000488494 MCM3APO60318 1980 aa20.78■□□□□ 0.92
ITGB1-215ENST00000488494 NFIBO00712 420 aa20.78■□□□□ 0.92
ITGB1-215ENST00000488494 PGK1P00558 417 aa20.78■□□□□ 0.92
ITGB1-215ENST00000488494 SYN1P17600 705 aa20.78■□□□□ 0.92
ITGB1-215ENST00000488494 ATN1P54259 1190 aaPredicted RBP20.78■□□□□ 0.92
ITGB1-215ENST00000488494 TRDNQ13061 729 aa20.78■□□□□ 0.92
ITGB1-215ENST00000488494 IFIT1BQ5T764 474 aaKnown RBP20.78■□□□□ 0.92
ITGB1-215ENST00000488494 CCDC144CPQ8IYA2 1237 aa20.78■□□□□ 0.92
ITGB1-215ENST00000488494 ASTN1O14525 1302 aa20.78■□□□□ 0.92
ITGB1-215ENST00000488494 SOWAHBA6NEL2 793 aa20.77■□□□□ 0.92
ITGB1-215ENST00000488494 ASPRV1Q53RT3 343 aa20.77■□□□□ 0.92
ITGB1-215ENST00000488494 RALYLQ86SE5 291 aaKnown RBP20.77■□□□□ 0.92
ITGB1-215ENST00000488494 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.92
ITGB1-215ENST00000488494 RBM27Q9P2N5 1060 aaKnown RBP20.77■□□□□ 0.92
ITGB1-215ENST00000488494 FAM184BQ9ULE4 1060 aa20.77■□□□□ 0.92
ITGB1-215ENST00000488494 RBM8AQ9Y5S9 174 aaKnown RBP20.77■□□□□ 0.92
ITGB1-215ENST00000488494 DDX49Q9Y6V7 483 aaKnown RBP20.77■□□□□ 0.92
ITGB1-215ENST00000488494 WDR19Q8NEZ3 1342 aa20.77■□□□□ 0.91
ITGB1-215ENST00000488494 SYNRGQ9UMZ2 1314 aa20.77■□□□□ 0.91
ITGB1-215ENST00000488494 SLC34A2O95436 690 aa20.76■□□□□ 0.91
ITGB1-215ENST00000488494 ACVR2BQ13705 512 aa20.76■□□□□ 0.91
ITGB1-215ENST00000488494 SEC23AQ15436 765 aa20.76■□□□□ 0.91
ITGB1-215ENST00000488494 BMP2KLQ5H9B9 411 aa20.76■□□□□ 0.91
ITGB1-215ENST00000488494 SLC30A10Q6XR72 485 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms