RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
COL9A2-208ENST00000488463 ALPK3Q96L96 1907 aa16.69■□□□□ 0.26
COL9A2-208ENST00000488463 CAPN2P17655 700 aa16.69■□□□□ 0.26
COL9A2-208ENST00000488463 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
COL9A2-208ENST00000488463 MFSD14CQ5VZR4 134 aa16.69■□□□□ 0.26
COL9A2-208ENST00000488463 PNMA1Q8ND90 353 aa16.69■□□□□ 0.26
COL9A2-208ENST00000488463 MCM3APO60318 1980 aa16.69■□□□□ 0.26
COL9A2-208ENST00000488463 TAL1P17542 331 aaPredicted RBP16.68■□□□□ 0.26
COL9A2-208ENST00000488463 ANTXR2P58335 489 aa16.68■□□□□ 0.26
COL9A2-208ENST00000488463 KCTD2Q14681 263 aa16.68■□□□□ 0.26
COL9A2-208ENST00000488463 NECTIN1Q15223 517 aa16.68■□□□□ 0.26
COL9A2-208ENST00000488463 SYDE2Q5VT97 1194 aa16.68■□□□□ 0.26
COL9A2-208ENST00000488463 CHST13Q8NET6 341 aa16.68■□□□□ 0.26
COL9A2-208ENST00000488463 GPCPD1Q9NPB8 672 aa16.68■□□□□ 0.26
COL9A2-208ENST00000488463 FARP2O94887 1054 aaPredicted RBP16.67■□□□□ 0.26
COL9A2-208ENST00000488463 TFRCP02786 760 aaKnown RBP16.67■□□□□ 0.26
COL9A2-208ENST00000488463 NEFLP07196 543 aa16.67■□□□□ 0.26
COL9A2-208ENST00000488463 IKQ13123 557 aaPredicted RBP16.67■□□□□ 0.26
COL9A2-208ENST00000488463 MB21D2Q8IYB1 491 aaPredicted RBP16.67■□□□□ 0.26
COL9A2-208ENST00000488463 TINF2Q9BSI4 451 aa16.67■□□□□ 0.26
COL9A2-208ENST00000488463 SENP2Q9HC62 589 aa16.67■□□□□ 0.26
COL9A2-208ENST00000488463 SLC5A4Q9NY91 659 aa16.67■□□□□ 0.26
COL9A2-208ENST00000488463 ISY1Q9ULR0 285 aaKnown RBP16.67■□□□□ 0.26
COL9A2-208ENST00000488463 SLC27A2O14975 620 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 ICAM1P05362 532 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 GPATCH4Q5T3I0 446 aaKnown RBP16.66■□□□□ 0.26
COL9A2-208ENST00000488463 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 CCDC174Q6PII3 467 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 ANKLE1Q8NAG6 615 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 DIS3LQ8TF46 1054 aaKnown RBP16.66■□□□□ 0.26
COL9A2-208ENST00000488463 CPVLQ9H3G5 476 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 KAT14Q9H8E8 782 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 RNF146Q9NTX7 359 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 FBXO40Q9UH90 709 aa16.66■□□□□ 0.26
COL9A2-208ENST00000488463 CDC45O75419 566 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 SLC4A3P48751 1232 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 TKFCQ3LXA3 575 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 PRAMEF19Q5SWL8 479 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 MAMDC4Q6UXC1 1216 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 FAM133AQ8N9E0 248 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 NCOA7Q8NI08 942 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 IGDCC4Q8TDY8 1250 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 TRERF1Q96PN7 1200 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 UBAC1Q9BSL1 405 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 ACAD9Q9H845 621 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 A1CFQ9NQ94 594 aaKnown RBP16.65■□□□□ 0.26
COL9A2-208ENST00000488463 HOMER2Q9NSB8 354 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 CTDP1Q9Y5B0 961 aaPredicted RBP16.65■□□□□ 0.26
COL9A2-208ENST00000488463 ASTN1O14525 1302 aa16.65■□□□□ 0.26
COL9A2-208ENST00000488463 BAZ2BQ9UIF8 2168 aaKnown RBP16.64■□□□□ 0.25
COL9A2-208ENST00000488463 SNAI1O95863 264 aaPredicted RBP16.64■□□□□ 0.25
COL9A2-208ENST00000488463 COL6A1P12109 1028 aa16.64■□□□□ 0.25
COL9A2-208ENST00000488463 TRDNQ13061 729 aa16.64■□□□□ 0.25
COL9A2-208ENST00000488463 SLC35G1Q2M3R5 365 aa16.64■□□□□ 0.25
COL9A2-208ENST00000488463 IFIT1BQ5T764 474 aaKnown RBP16.64■□□□□ 0.25
COL9A2-208ENST00000488463 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
COL9A2-208ENST00000488463 KIAA1211Q6ZU35 1233 aa16.64■□□□□ 0.25
COL9A2-208ENST00000488463 CHST3Q7LGC8 479 aa16.64■□□□□ 0.25
COL9A2-208ENST00000488463 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
COL9A2-208ENST00000488463 PAWRQ96IZ0 340 aaKnown RBP16.64■□□□□ 0.25
COL9A2-208ENST00000488463 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
COL9A2-208ENST00000488463 PPP4R2Q9NY27 417 aa16.64■□□□□ 0.25
COL9A2-208ENST00000488463 DDX20Q9UHI6 824 aaKnown RBP16.64■□□□□ 0.25
COL9A2-208ENST00000488463 MYH6P13533 1939 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 LRRC37A2A6NM11 1700 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 ZNF865P0CJ78 1059 aaPredicted RBP16.63■□□□□ 0.25
COL9A2-208ENST00000488463 ALAS1P13196 640 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 CNTN2Q02246 1040 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 HABP4Q5JVS0 413 aaKnown RBP16.63■□□□□ 0.25
COL9A2-208ENST00000488463 ANKRD35Q8N283 1001 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 MSL3Q8N5Y2 521 aaKnown RBP16.63■□□□□ 0.25
COL9A2-208ENST00000488463 CLEC4DQ8WXI8 215 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 DDX11Q96FC9 970 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 UBA5Q9GZZ9 404 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 NRBP1Q9UHY1 535 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 MAD2L2Q9UI95 211 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 CCPG1Q9ULG6 757 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 WDR19Q8NEZ3 1342 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 SYNGAP1Q96PV0 1343 aa16.63■□□□□ 0.25
COL9A2-208ENST00000488463 TRIOBPQ9H2D6 2365 aa16.62■□□□□ 0.25
COL9A2-208ENST00000488463 SOWAHBA6NEL2 793 aa16.62■□□□□ 0.25
COL9A2-208ENST00000488463 SEPT4O43236 478 aa16.62■□□□□ 0.25
COL9A2-208ENST00000488463 TROAPQ12815 778 aa16.62■□□□□ 0.25
COL9A2-208ENST00000488463 RALYLQ86SE5 291 aaKnown RBP16.62■□□□□ 0.25
COL9A2-208ENST00000488463 ADGRF4Q8IZF3 695 aa16.62■□□□□ 0.25
COL9A2-208ENST00000488463 KATNBL1Q9H079 304 aa16.62■□□□□ 0.25
COL9A2-208ENST00000488463 GPHNQ9NQX3 736 aaPredicted RBP16.62■□□□□ 0.25
COL9A2-208ENST00000488463 CYP39A1Q9NYL5 469 aa16.62■□□□□ 0.25
COL9A2-208ENST00000488463 PFASO15067 1338 aa16.62■□□□□ 0.25
COL9A2-208ENST00000488463 PALM3A6NDB9 673 aaPredicted RBP16.61■□□□□ 0.25
COL9A2-208ENST00000488463 NFIBO00712 420 aa16.61■□□□□ 0.25
COL9A2-208ENST00000488463 IFIT3O14879 490 aaKnown RBP16.61■□□□□ 0.25
COL9A2-208ENST00000488463 MSCO60682 206 aa16.61■□□□□ 0.25
COL9A2-208ENST00000488463 PARP1P09874 1014 aaKnown RBP16.61■□□□□ 0.25
COL9A2-208ENST00000488463 RASEFQ8IZ41 740 aa16.61■□□□□ 0.25
COL9A2-208ENST00000488463 MTMR8Q96EF0 704 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms