RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 CLASRPQ8N2M8 674 aaKnown RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 CGREF1Q99674 301 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 LNPEPQ9UIQ6 1025 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 ZNF330Q9Y3S2 320 aaPredicted RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 CYP46A1Q9Y6A2 500 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 LRRC7Q96NW7 1537 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 SBNO1A3KN83 1393 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 PNMA6EA0A0J9YXQ4 647 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 RGL2O15211 777 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 PDCP20941 246 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 PDCLQ13371 301 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 SPDYCQ5MJ68 293 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 RUFY3Q7L099 469 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 DHTKD1Q96HY7 919 aaPredicted RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 KIF13AQ9H1H9 1805 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 MYO3AQ8NEV4 1616 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 NCKAP5LQ9HCH0 1330 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 DIP2CQ9Y2E4 1556 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 DIAPH2O60879 1101 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 CA8P35219 290 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 GEMIN4P57678 1058 aaKnown RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 CCDC70Q6NSX1 233 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 GIGYF2Q6Y7W6 1299 aaKnown RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 RSPH3Q86UC2 560 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 FERMT3Q86UX7 667 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 BPHLQ86WA6 291 aaPredicted RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 CYFIP2Q96F07 1278 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 NAF1Q96HR8 494 aaKnown RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 SMC6Q96SB8 1091 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 MAK16Q9BXY0 300 aaKnown RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 SLC7A5P2Q9GIP4 190 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 HELLSQ9NRZ9 838 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 SPG7Q9UQ90 795 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 COL3A1P02461 1466 aaPredicted RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 KIAA0232Q92628 1395 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 LRRD1A4D1F6 860 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 NDUFB5O43674 189 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 PPP1R37O75864 691 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 GSTA1P08263 222 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 CCND1P24385 295 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 LSAMPQ13449 338 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 TOGARAM2Q6ZUX3 1019 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 C3orf67Q6ZVT6 689 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 ENGASEQ8NFI3 743 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 RABEP2Q9H5N1 569 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 MRPL44Q9H9J2 332 aaKnown RBP7.03□□□□□ -1.28
SIK3-212ENST00000488337 PANK4Q9NVE7 773 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 TSKSQ9UJT2 592 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 CASZ1Q86V15 1759 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 WNT7AO00755 349 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 BIRC5O15392 142 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 SART1O43290 800 aaKnown RBP7.03□□□□□ -1.28
SIK3-212ENST00000488337 SSBP05455 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
SIK3-212ENST00000488337 KRT9P35527 623 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 AK2P54819 239 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 USP46P62068 366 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 SHROOM1Q2M3G4 852 aaPredicted RBP7.03□□□□□ -1.28
SIK3-212ENST00000488337 PALB2Q86YC2 1186 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 TRIML1Q8N9V2 468 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 PTPRN2Q92932 1015 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 ZSCAN31Q96LW9 406 aaPredicted RBP7.03□□□□□ -1.28
SIK3-212ENST00000488337 CTNNAL1Q9UBT7 734 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 TRIM43BA6NCK2 446 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 AKR1B10O60218 316 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 RAB11FIP3O75154 756 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 MYBL1P10243 752 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 HSPA4P34932 840 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 MECOMQ03112 1051 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 RCN1Q15293 331 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 TBC1D10BQ4KMP7 808 aaPredicted RBP7.03□□□□□ -1.28
SIK3-212ENST00000488337 NGLY1Q96IV0 654 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 SELENOOQ9BVL4 669 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 UBAP1Q9NZ09 502 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 FRMPD1Q5SYB0 1578 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 EDC4Q6P2E9 1401 aaKnown RBP7.03□□□□□ -1.28
SIK3-212ENST00000488337 FOXO3O43524 673 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 GJB2P29033 226 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 ENOX2Q16206 610 aaKnown RBP7.03□□□□□ -1.28
SIK3-212ENST00000488337 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.03□□□□□ -1.28
SIK3-212ENST00000488337 KANK3Q6NY19 840 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 TRPC4APQ8TEL6 797 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 NRDE2Q9H7Z3 1164 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 LEMD3Q9Y2U8 911 aa7.03□□□□□ -1.28
SIK3-212ENST00000488337 AGLP35573 1532 aa7.02□□□□□ -1.28
SIK3-212ENST00000488337 LSM1O15116 133 aaKnown RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 PRPF3O43395 683 aaKnown RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 CBFA2T2O43439 604 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 STX10O60499 249 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 GLRX3O76003 335 aaKnown RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 TFRCP02786 760 aaKnown RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 RHOXF2BP0C7M4 288 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 RNF220Q5VTB9 566 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 SLC2A7Q6PXP3 512 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 CCNI2Q6ZMN8 369 aaPredicted RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 PPP1R42Q7Z4L9 355 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 ARHGEF25Q86VW2 580 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 UNC5CLQ8IV45 518 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 VSTM4Q8IW00 320 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 RHPN1Q8TCX5 695 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 RNPC3Q96LT9 517 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms