RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SNAI1O95863 264 aaPredicted RBP13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 SLC16A2P36021 539 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 CNTN2Q02246 1040 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 SLC39A5Q6ZMH5 540 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 CHST13Q8NET6 341 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 GMCL1Q96IK5 515 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 TMEM47Q9BQJ4 181 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 GPCPD1Q9NPB8 672 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 RNF146Q9NTX7 359 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 PRR12Q9ULL5 1215 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 ZNF536O15090 1300 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 FRMPD2Q68DX3 1309 aaPredicted RBP13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 DNAJC25-GNG10A0A024R161 153 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 FGRP09769 529 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 AKR1A1P14550 325 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 BMP8BP34820 402 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 OAZ1P54368 228 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 TRIM60Q495X7 471 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 AKNAD1Q5T1N1 836 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 MFSD6Q6ZSS7 791 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 TBC1D10CQ8IV04 446 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 FGD4Q96M96 766 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 TRERF1Q96PN7 1200 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 ZKSCAN3Q9BRR0 538 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 ACAD9Q9H845 621 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 PRDM5Q9NQX1 630 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 NRBP1Q9UHY1 535 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 DDX49Q9Y6V7 483 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 MYH7BA7E2Y1 1941 aa13.34□□□□□ -0.27
NIPAL3-207ENST00000488155 A0A1W2PPC1 479 aa13.33□□□□□ -0.28
NIPAL3-207ENST00000488155 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
NIPAL3-207ENST00000488155 FDX1P10109 184 aa13.33□□□□□ -0.28
NIPAL3-207ENST00000488155 MFAP1P55081 439 aaKnown RBP13.33□□□□□ -0.28
NIPAL3-207ENST00000488155 MUM1L1Q5H9M0 696 aa13.33□□□□□ -0.28
NIPAL3-207ENST00000488155 DCAF4Q8WV16 495 aa13.33□□□□□ -0.28
NIPAL3-207ENST00000488155 PRKAG2Q9UGJ0 569 aa13.33□□□□□ -0.28
NIPAL3-207ENST00000488155 SYNGAP1Q96PV0 1343 aa13.33□□□□□ -0.28
NIPAL3-207ENST00000488155 ZNF213O14771 459 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 TOP1P11387 765 aaKnown RBP13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 PDE4AP27815 886 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 ACVR2BQ13705 512 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 MAMDC4Q6UXC1 1216 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 ARMCX2Q7L311 632 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 RNF180Q86T96 592 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 CCDC144CPQ8IYA2 1237 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 TDHQ8IZJ6 230 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 LBHD1Q9BQE6 289 aaPredicted RBP13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 A1CFQ9NQ94 594 aaKnown RBP13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 FAM184BQ9ULE4 1060 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 CCPG1Q9ULG6 757 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 LRRC37A2A6NM11 1700 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 NEDD4P46934 1319 aa13.32□□□□□ -0.28
NIPAL3-207ENST00000488155 MYADML2A6NDP7 307 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 ADCY6O43306 1168 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 PLA2G6O60733 806 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 ADAMTS4O75173 837 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 NOVP48745 357 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 CCDC144BQ3MJ40 725 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 SYDE2Q5VT97 1194 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 NSMFQ6X4W1 530 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 MSL3Q8N5Y2 521 aaKnown RBP13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 FAM133AQ8N9E0 248 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 PURBQ96QR8 312 aaKnown RBP13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 ABHD16BQ9H3Z7 469 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 TCP11L1Q9NUJ3 509 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 PHF24Q9UPV7 400 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 ZMYM6O95789 1325 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 SYNRGQ9UMZ2 1314 aa13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 TRIP12Q14669 1992 aaPredicted RBP13.31□□□□□ -0.28
NIPAL3-207ENST00000488155 A0A1W2PQ45 241 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 A0A1W2PQY0 241 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 SOWAHBA6NEL2 793 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 B4E1Z4 1266 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 C6orf222P0C671 652 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 GOLGA8HP0CJ92 632 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 PDHBP11177 359 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 TLE2Q04725 743 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 KCNA10Q16322 511 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 TKFCQ3LXA3 575 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 EEPD1Q7L9B9 569 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 IL25Q9H293 177 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 CPVLQ9H3G5 476 aa13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 RNF41Q9H4P4 317 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-207ENST00000488155 KIAA1217Q5T5P2 1943 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 HIP1O00291 1037 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 PQBP1O60828 265 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 KDM4AO75164 1064 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 DUSP11O75319 330 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms