RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 ZBED2Q9BTP6 218 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 MROH5Q6ZUA9 1318 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 PLA2G4DQ86XP0 818 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 SDR42E1Q8WUS8 393 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 CABS1Q96KC9 395 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 DDX25Q9UHL0 483 aaKnown RBP16.82■□□□□ 0.28
PKD1-220ENST00000487932 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 KDM3AQ9Y4C1 1321 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 OPHN1O60890 802 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 GYG1P46976 350 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 KCTD2Q14681 263 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 KRT40Q6A162 431 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 FBXO11Q86XK2 927 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 TBC1D22AQ8WUA7 517 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 GPKOWQ92917 476 aaPredicted RBP eCLIP16.82■□□□□ 0.28
PKD1-220ENST00000487932 SDCCAG3Q96C92 435 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 NRBP2Q9NSY0 501 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 SUCLG2Q96I99 432 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 PHACTR3Q96KR7 559 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 LGR6Q9HBX8 967 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 SERTAD1Q9UHV2 236 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 OSBPP22059 807 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 PTPREP23469 700 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 TRIM68Q6AZZ1 485 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 EEPD1Q7L9B9 569 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 RMDN2Q96LZ7 410 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 NT5C3AQ9H0P0 336 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 PTPN22Q9Y2R2 807 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 LMNB1P20700 586 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 ACRBPQ8NEB7 543 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 LRGUKQ96M69 825 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 CPSF3Q9UKF6 684 aaKnown RBP16.81■□□□□ 0.28
PKD1-220ENST00000487932 PCDHB4Q9Y5E5 795 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 TMEM232C9JQI7 657 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 ZSCAN20P17040 1043 aaPredicted RBP16.81■□□□□ 0.28
PKD1-220ENST00000487932 NFE2L3Q9Y4A8 694 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 HINFPQ9BQA5 517 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 SLITRK6Q9H5Y7 841 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 DCTPP1Q9H773 170 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 DDX41Q9UJV9 622 aaKnown RBP16.81■□□□□ 0.28
PKD1-220ENST00000487932 PCDHA12Q9UN75 941 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 USP17L12C9JPN9 530 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 USP17L21D6R901 530 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 KRIT1O00522 736 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 BFSP1Q12934 665 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 RAB17Q9H0T7 212 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 SNX25Q9H3E2 840 aa16.81■□□□□ 0.28
PKD1-220ENST00000487932 IBTKQ9P2D0 1353 aaPredicted RBP16.81■□□□□ 0.28
PKD1-220ENST00000487932 POLR2BP30876 1174 aaKnown RBP16.8■□□□□ 0.28
PKD1-220ENST00000487932 ADKP55263 362 aaKnown RBP16.8■□□□□ 0.28
PKD1-220ENST00000487932 CYP4A11Q02928 519 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 SKIV2LQ15477 1246 aaKnown RBP16.8■□□□□ 0.28
PKD1-220ENST00000487932 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 MCF2L2Q86YR7 1114 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 CPSF2Q9P2I0 782 aaKnown RBP16.8■□□□□ 0.28
PKD1-220ENST00000487932 GARSP41250 739 aaKnown RBP16.8■□□□□ 0.28
PKD1-220ENST00000487932 PHEXP78562 749 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 BRD3Q15059 726 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 ACBD5Q5T8D3 534 aaPredicted RBP16.8■□□□□ 0.28
PKD1-220ENST00000487932 FAM178BQ8IXR5 827 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 GNGT2O14610 69 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 VAMP4O75379 141 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 CCNYQ8ND76 341 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 FGD4Q96M96 766 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 KCNA6P17658 529 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 SERPINB6P35237 376 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 ARHGAP4P98171 946 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 MUM1Q2TAK8 710 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 NLRP7Q8WX94 980 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 FAM149B1Q96BN6 582 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 THAP12O43422 761 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 ICA1Q05084 483 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 MLKLQ8NB16 471 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 IWS1Q96ST2 819 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 USP26Q9BXU7 913 aa16.8■□□□□ 0.28
PKD1-220ENST00000487932 BTDP43251 543 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 YWHAGP61981 247 aaKnown RBP eCLIP16.79■□□□□ 0.28
PKD1-220ENST00000487932 C1orf228Q6PIY5 440 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 MYOCDQ8IZQ8 938 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 KCNG1Q9UIX4 513 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 CTNNA1P35221 906 aaKnown RBP16.79■□□□□ 0.28
PKD1-220ENST00000487932 CCDC38Q502W7 563 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 C7orf31Q8N865 590 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 XAB2Q9HCS7 855 aaKnown RBP16.79■□□□□ 0.28
PKD1-220ENST00000487932 BCAP29Q9UHQ4 241 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 ABCC1P33527 1531 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 SGK1O00141 431 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 MTMR3Q13615 1198 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 RAB44Q7Z6P3 723 aaPredicted RBP16.79■□□□□ 0.28
PKD1-220ENST00000487932 OTUD7AQ8TE49 926 aaPredicted RBP16.79■□□□□ 0.28
PKD1-220ENST00000487932 CSRNP1Q96S65 589 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 ARPP21Q9UBL0 812 aaPredicted RBP16.79■□□□□ 0.28
PKD1-220ENST00000487932 RALGAPBQ86X10 1494 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 GCKRQ14397 625 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 BBS5Q8N3I7 341 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
PKD1-220ENST00000487932 BAIAP2L1Q9UHR4 511 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms