RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 SPATA4Q8NEY3 305 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 KLHL29Q96CT2 875 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 EPSTI1Q96J88 318 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 FDPSP14324 419 aaKnown RBP16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SPTY2D1Q68D10 685 aaPredicted RBP16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CMTR1Q8N1G2 835 aaKnown RBP16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 HVCN1Q96D96 273 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ZNF532Q9HCE3 1301 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CD248Q9HCU0 757 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TTC26A0AVF1 554 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 MDH1P40925 334 aaKnown RBP16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 HEATR3Q7Z4Q2 680 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CNOT6LQ96LI5 555 aaKnown RBP16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PCDHA13Q9Y5I0 950 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 INO80Q9ULG1 1556 aaPredicted RBP16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 MROH7-TTC4A0A0A0MT08 1334 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 LGALS16A8MUM7 142 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SUN1O94901 812 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 GPTP24298 496 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SH2D3CQ8N5H7 860 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 KLHL14Q9P2G3 628 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PPP2R5EQ16537 467 aa16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TBC1D1Q86TI0 1168 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 THAP9Q9H5L6 903 aa16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SMTNP53814 917 aa16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PLCB4Q15147 1175 aa16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SYCE1Q8N0S2 351 aa16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 AARSP49588 968 aaKnown RBP eCLIP16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 KRT79Q5XKE5 535 aa16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CAPRIN2Q6IMN6 1127 aaKnown RBP16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ZNF444Q8N0Y2 327 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 DHTKD1Q96HY7 919 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 LRRC1Q9BTT6 524 aa16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ARMT1Q9H993 441 aa16.86■□□□□ 0.29
HLA-DQB1-209ENST00000487676 hCG_1642624A0A1W2PR95 340 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CDC25AP30304 524 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TBC1D5Q92609 795 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 STMN2Q93045 179 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SLC40A1Q9NP59 571 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TCHHQ07283 1943 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ZBTB16Q05516 673 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CAVIN4Q5BKX8 364 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CHP1Q99653 195 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 MTUS1Q9ULD2 1270 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 WDR19Q8NEZ3 1342 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 MIGA1Q8NAN2 632 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 EEF2KMTQ96G04 330 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 OSBPL9Q96SU4 736 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 KIF11P52732 1056 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TAF11Q15544 211 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ELOA2Q8IYF1 753 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TRIM4Q9C037 500 aa16.85■□□□□ 0.29
HLA-DQB1-209ENST00000487676 FLOT1O75955 427 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 GYPCP04921 128 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SETSIPP0DME0 302 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 LONP1P36776 959 aaKnown RBP16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 EIF4A3P38919 411 aaKnown RBP16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 RASSF2P50749 326 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CUL1Q13616 776 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 GRIPAP1Q4V328 841 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 FAM133BQ5BKY9 247 aaKnown RBP16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 NAA35Q5VZE5 725 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 MB21D2Q8IYB1 491 aaPredicted RBP16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CEP120Q8N960 986 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 DPH5Q9H2P9 285 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SGSM3Q96HU1 749 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SNX12Q9UMY4 172 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 MUM1Q2TAK8 710 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 LIMA1Q9UHB6 759 aaKnown RBP16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CPP00450 1065 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 LIFRP42702 1097 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TRAPPC11Q7Z392 1133 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 RNF26Q9BY78 433 aaPredicted RBP16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 FAM114A2Q9NRY5 505 aa16.84■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TBX2Q13207 712 aaPredicted RBP16.83■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ZNF526Q8TF50 670 aaPredicted RBP16.83■□□□□ 0.29
HLA-DQB1-209ENST00000487676 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.83■□□□□ 0.29
HLA-DQB1-209ENST00000487676 FAM107AO95990 144 aa16.83■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CASP1P29466 404 aa16.83■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CLUL1Q15846 466 aa16.83■□□□□ 0.28
HLA-DQB1-209ENST00000487676 TSC22D3Q99576 134 aa16.83■□□□□ 0.28
HLA-DQB1-209ENST00000487676 HAUS2Q9NVX0 235 aa16.83■□□□□ 0.28
HLA-DQB1-209ENST00000487676 EIF3BP55884 814 aaKnown RBP16.83■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CETN1Q12798 172 aa16.83■□□□□ 0.28
HLA-DQB1-209ENST00000487676 LRRC24Q50LG9 513 aa16.83■□□□□ 0.28
HLA-DQB1-209ENST00000487676 MAGEB6P1A0A0J9YX57 407 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 A0A1W2PQC6 194 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ZNF185O15231 689 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 NAPAP54920 295 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PPP4R3AQ6IN85 833 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CABP7Q86V35 215 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 IFNL3Q8IZI9 196 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 GBP5Q96PP8 586 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 C6orf50Q9HD87 102 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PARP2Q9UGN5 583 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 HPSEQ9Y251 543 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms