RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 FGFR1OPO95684 399 aaKnown RBP13.9□□□□□ -0.18
TMEM39B-208ENST00000487305 ZBED6P86452 979 aa13.9□□□□□ -0.18
TMEM39B-208ENST00000487305 IL17AQ16552 155 aa13.9□□□□□ -0.18
TMEM39B-208ENST00000487305 KRT25Q7Z3Z0 450 aa13.9□□□□□ -0.18
TMEM39B-208ENST00000487305 SAR1BQ9Y6B6 198 aa13.9□□□□□ -0.18
TMEM39B-208ENST00000487305 STRCQ7RTU9 1775 aa13.9□□□□□ -0.18
TMEM39B-208ENST00000487305 EIF3CLB5ME19 914 aaKnown RBP13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 HNRNPH2P55795 449 aaKnown RBP13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 RPS8P62241 208 aaKnown RBP13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 ITIH3Q06033 890 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 SF3B2Q13435 895 aaKnown RBP13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 RCSD1Q6JBY9 416 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 LEKR1Q6ZMV7 388 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 ACRBPQ8NEB7 543 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 EIF3CQ99613 913 aaKnown RBP13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 EXOC1Q9NV70 894 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 BARHL2Q9NY43 387 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 TTC26A0AVF1 554 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 hCG_1984214I3L0E3 225 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 WNT7AO00755 349 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 CCNE1P24864 410 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 CASP1P29466 404 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 GNA11P29992 359 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 AARSP49588 968 aaKnown RBP eCLIP13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 IRF2BP1Q8IU81 584 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 FNBP4Q8N3X1 1017 aaPredicted RBP13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 ZNF713Q8N859 430 aaPredicted RBP13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 PNMA1Q8ND90 353 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 TRIM47Q96LD4 638 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 C7orf25Q9BPX7 421 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 SLF1Q9BQI6 1058 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 LRRC27Q9C0I9 530 aa13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 MKRN1Q9UHC7 482 aaKnown RBP13.89□□□□□ -0.19
TMEM39B-208ENST00000487305 COL5A3P25940 1745 aaPredicted RBP13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 MYH14Q7Z406 1995 aaKnown RBP13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 SPATA31A1Q5TZJ5 1347 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 BAG3O95817 575 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 LDHCP07864 332 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 HSPA2P54652 639 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 CASP8Q14790 479 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 C12orf60Q5U649 245 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 TTI2Q6NXR4 508 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 CNNM4Q6P4Q7 775 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 ZNF384Q8TF68 577 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 NLRP3Q96P20 1036 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 ERGIC2Q96RQ1 377 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 SPZ1Q9BXG8 430 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 EPC1Q9H2F5 836 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 ABCB6Q9NP58 842 aa13.88□□□□□ -0.19
TMEM39B-208ENST00000487305 CYP2D7A0A087X1C5 515 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 KLRC4O43908 158 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 PRLRP16471 622 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 HNRNPH3P31942 346 aaKnown RBP13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 ACTN2P35609 894 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 USP14P54578 494 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 PPP4CP60510 307 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 ITPK1Q13572 414 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 ZSCAN26Q16670 478 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 ERFEQ4G0M1 354 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 NAALADL2Q58DX5 795 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 FKBP15Q5T1M5 1219 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 ZSCAN29Q8IWY8 852 aaPredicted RBP13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 GOLGA6L1Q8N7Z2 621 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 P2RX5Q93086 422 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 PNKPQ96T60 521 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 ROBO1Q9Y6N7 1651 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 AHDC1Q5TGY3 1603 aaPredicted RBP13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 TFAP4Q01664 338 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 CCDC122Q5T0U0 273 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 KIAA1328Q86T90 577 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 CCDC84Q86UT8 332 aaPredicted RBP13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 DZIP1Q86YF9 867 aaKnown RBP13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 CSGALNACT2Q8N6G5 542 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 TUBGCP2Q9BSJ2 902 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 EDEM3Q9BZQ6 932 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 ZMYND12Q9H0C1 365 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 MCM9Q9NXL9 1143 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 PCDHA6Q9UN73 950 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 GDAQ9Y2T3 454 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 PCDHA8Q9Y5H6 950 aa13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 COL16A1Q07092 1604 aaPredicted RBP13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 ZNF335Q9H4Z2 1342 aaPredicted RBP13.87□□□□□ -0.19
TMEM39B-208ENST00000487305 USO1O60763 962 aaKnown RBP13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 TRIM21P19474 475 aaKnown RBP13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 MCM6Q14566 821 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 BARGINQ6ZT62 677 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 STAMQ92783 540 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 TTYH3Q9C0H2 523 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 ZSWIM4Q9H7M6 989 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 PDE11AQ9HCR9 933 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 C6orf50Q9HD87 102 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 ESYT2A0FGR8 921 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 PALM3A6NDB9 673 aaPredicted RBP13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 VSNL1P62760 191 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 TBC1D8BQ0IIM8 1120 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms