RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 ATP8A2Q9NTI2 1148 aa7.72□□□□□ -1.17
CTDSPL-208ENST00000486978 MCM9Q9NXL9 1143 aa7.72□□□□□ -1.17
CTDSPL-208ENST00000486978 PARP14Q460N5 1801 aa7.72□□□□□ -1.17
CTDSPL-208ENST00000486978 TTC41PQ6P2S7 1318 aa7.72□□□□□ -1.17
CTDSPL-208ENST00000486978 MCM3APO60318 1980 aa7.71□□□□□ -1.17
CTDSPL-208ENST00000486978 KMT2EQ8IZD2 1858 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 ADCY6O43306 1168 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 PRKAB2O43741 272 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 GABBR2O75899 941 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 GLRX3O76003 335 aaKnown RBP7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 GH2P01242 217 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 FGBP02675 491 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 CHGBP05060 677 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 CA3P07451 260 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 ZNF865P0CJ78 1059 aaPredicted RBP7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 SHMT1P34896 483 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 PLCD1P51178 756 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 GABPAQ06546 454 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 HDAC1Q13547 482 aaPredicted RBP7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 CERKLQ49MI3 558 aaPredicted RBP7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 TSHZ3Q63HK5 1081 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L2Q6R6M4 530 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 KLHDC9Q8NEP7 349 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 ACER1Q8TDN7 264 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 STARD7Q9NQZ5 370 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 FAM86C1Q9NVL1 165 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 PCDHA11Q9Y5I1 949 aa7.71□□□□□ -1.18
CTDSPL-208ENST00000486978 TET1Q8NFU7 2136 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 ZFYP08048 801 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 ERCC3P19447 782 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 MX1P20591 662 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 CCL23P55773 120 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 CCNA1P78396 465 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 TCF15Q12870 199 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 GRB10Q13322 594 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 TTLL4Q14679 1199 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 KCNA10Q16322 511 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 ABCB5Q2M3G0 1257 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 PSRC1Q6PGN9 363 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 LBX2Q6XYB7 198 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 AMOTL1Q8IY63 956 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 RASEFQ8IZ41 740 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 TMEM199Q8N511 208 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 PI4K2BQ8TCG2 481 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 OTUD7AQ8TE49 926 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 APPBP2Q92624 585 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 PUS7LQ9H0K6 701 aaKnown RBP7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 WNT8AQ9H1J5 351 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 CABP5Q9NP86 173 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 SWAP70Q9UH65 585 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 SLC4A4Q9Y6R1 1079 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 IVNS1ABPQ9Y6Y0 642 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 SALL3Q9BXA9 1300 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 SYNRGQ9UMZ2 1314 aa7.7□□□□□ -1.18
CTDSPL-208ENST00000486978 RNF113AO15541 343 aaKnown RBP7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 CD4P01730 458 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 PGK2P07205 417 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 CYP2D6P10635 497 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 RARBP10826 455 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 VCAM1P19320 739 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 TAP1Q03518 808 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 RAB3GAP1Q15042 981 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 KIAA1755Q5JYT7 1200 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 ANKRD45Q5TZF3 282 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 C12orf60Q5U649 245 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 RNF180Q86T96 592 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 FAM126BQ8IXS8 530 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 GTF3C2Q8WUA4 911 aaPredicted RBP7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 ARNTL2Q8WYA1 636 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 OSBP2Q969R2 916 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 C12orf42Q96LP6 360 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 PHF12Q96QT6 1004 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 STRBPQ96SI9 672 aaKnown RBP7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 FEZ1Q99689 392 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 KCNH6Q9H252 994 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 BAZ2AQ9UIF9 1905 aaKnown RBP7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 CACNA1BQ00975 2339 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 COL4A6Q14031 1691 aa7.69□□□□□ -1.18
CTDSPL-208ENST00000486978 CYP2D7A0A087X1C5 515 aa7.68□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L12C9JPN9 530 aa7.68□□□□□ -1.18
CTDSPL-208ENST00000486978 USP17L21D6R901 530 aa7.68□□□□□ -1.18
CTDSPL-208ENST00000486978 ARVCFO00192 962 aa7.68□□□□□ -1.18
CTDSPL-208ENST00000486978 MPHOSPH10O00566 681 aaKnown RBP7.68□□□□□ -1.18
CTDSPL-208ENST00000486978 CTAGE5O15320 804 aa7.68□□□□□ -1.18
CTDSPL-208ENST00000486978 GTPBP6O43824 516 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL-208ENST00000486978 PTGS1P23219 599 aa7.68□□□□□ -1.18
CTDSPL-208ENST00000486978 SSTR3P32745 418 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL-208ENST00000486978 GUCY1A2P33402 732 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms